Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30273
(573 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 152 5e-36
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 132 7e-30
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 126 3e-28
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 111 1e-23
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 110 3e-23
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 103 3e-21
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 103 4e-21
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 99 8e-20
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 98 1e-19
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 90 4e-17
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 87 2e-16
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 83 6e-15
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 81 2e-14
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 71 1e-11
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 69 6e-11
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 68 1e-10
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 63 5e-09
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 47 4e-04
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 46 5e-04
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 46 8e-04
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 42 0.008
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 42 0.010
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 41 0.024
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 40 0.041
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 39 0.096
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 38 0.13
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 37 0.29
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 37 0.29
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 37 0.39
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 36 0.89
UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga... 36 0.89
UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilu... 34 2.1
UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 34 2.7
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 34 2.7
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 33 4.8
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 33 4.8
UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia... 33 6.3
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 6.3
UniRef50_A6FVI8 Cluster: Surface repeat protein, putative; n=2; ... 33 6.3
UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides im... 33 6.3
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 33 6.3
UniRef50_UPI000155EEEB Cluster: PREDICTED: similar to leukocyte ... 32 8.3
UniRef50_UPI000051ABD5 Cluster: PREDICTED: similar to ric8a CG15... 32 8.3
UniRef50_Q3WJB7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.3
UniRef50_Q01HQ6 Cluster: OSIGBa0153E02-OSIGBa0093I20.19 protein;... 32 8.3
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 152 bits (369), Expect = 5e-36
Identities = 69/91 (75%), Positives = 80/91 (87%)
Frame = +1
Query: 1 AERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLR 180
AERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LR
Sbjct: 80 AERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLR 139
Query: 181 VFCIGFTNKDSLSQRKTCYAQHTQVEQSERK 273
VFCIGFT KDS+SQRKTCYAQH+Q++ K
Sbjct: 140 VFCIGFTIKDSMSQRKTCYAQHSQIKNIRAK 170
Score = 102 bits (244), Expect = 7e-21
Identities = 47/69 (68%), Positives = 58/69 (84%)
Frame = +3
Query: 261 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 440
IR KM II R++T+++L+ VV KL+PDSIAKDIEKAC +YPL DV IRKVKVLK+PRF
Sbjct: 167 IRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRF 226
Query: 441 EISKLMELH 467
++S LMELH
Sbjct: 227 DLSSLMELH 235
Score = 32.7 bits (71), Expect = 6.3
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 506 VERPEGYEPPVQESV 550
V+RPEGYEPPVQ SV
Sbjct: 255 VDRPEGYEPPVQASV 269
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 132 bits (318), Expect = 7e-30
Identities = 60/93 (64%), Positives = 74/93 (79%)
Frame = +1
Query: 4 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 183
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 184 FCIGFTNKDSLSQRKTCYAQHTQVEQSERKCVK 282
FC+GFT K + RKT YAQH QV Q +K ++
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 112 bits (269), Expect = 6e-24
Identities = 51/71 (71%), Positives = 61/71 (85%)
Frame = +3
Query: 255 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 434
R IRKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P
Sbjct: 162 RQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKP 221
Query: 435 RFEISKLMELH 467
+FE+ KLMELH
Sbjct: 222 KFELGKLMELH 232
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 126 bits (305), Expect = 3e-28
Identities = 58/90 (64%), Positives = 70/90 (77%)
Frame = +1
Query: 4 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 183
++++RK RL AE VQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+
Sbjct: 473 DQAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRL 532
Query: 184 FCIGFTNKDSLSQRKTCYAQHTQVEQSERK 273
FCI FT K +KTCYAQ +Q+ Q RK
Sbjct: 533 FCIAFTKKRVNQNKKTCYAQSSQIRQIRRK 562
Score = 88.6 bits (210), Expect = 9e-17
Identities = 40/71 (56%), Positives = 56/71 (78%)
Frame = +3
Query: 255 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 434
R IR+KM EI+T T+ +L+E+V K IP+SI ++IEKA IYPL++V IRKVK+LK P
Sbjct: 557 RQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAP 616
Query: 435 RFEISKLMELH 467
+F++ KLME+H
Sbjct: 617 KFDLGKLMEVH 627
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 111 bits (267), Expect = 1e-23
Identities = 54/95 (56%), Positives = 68/95 (71%)
Frame = +1
Query: 13 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 192
FRK +L AE V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF I
Sbjct: 80 FRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVFAI 139
Query: 193 GFTNKDSLSQRKTCYAQHTQVEQSERKCVKSLHAT 297
FT K ++KT YA+ ++V+ +K V L T
Sbjct: 140 CFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTET 174
Score = 51.2 bits (117), Expect = 2e-05
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 14/85 (16%)
Frame = +3
Query: 255 RAIRKKMCEIITRDVTNSELREVVNKLI--------------PDSIAKDIEKACHGIYPL 392
+AIRKKM +I+T V++++L+ VV+ LI ++A+ I I+P+
Sbjct: 161 KAIRKKMVDILTETVSSNDLKTVVDYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSIFPI 220
Query: 393 RDVCIRKVKVLKRPRFEISKLMELH 467
+V IRKVKVLK P+ + +KL EL+
Sbjct: 221 HNVFIRKVKVLKTPKVDAAKLSELY 245
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 110 bits (264), Expect = 3e-23
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +3
Query: 261 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 440
IRKKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P+F
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKF 170
Query: 441 EISKLMELH 467
E+ KLMELH
Sbjct: 171 ELGKLMELH 179
Score = 54.8 bits (126), Expect = 1e-06
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = +1
Query: 4 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 165
E +FRKF+LI E VQG+N L NFHG+DLT+DK+ ++K I +V+T D
Sbjct: 75 EVAFRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 103 bits (247), Expect = 3e-21
Identities = 51/90 (56%), Positives = 63/90 (70%)
Frame = +1
Query: 13 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 192
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 193 GFTNKDSLSQRKTCYAQHTQVEQSERKCVK 282
FT K Q+ YAQ T++++ + V+
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVE 95
Score = 71.7 bits (168), Expect = 1e-11
Identities = 29/71 (40%), Positives = 48/71 (67%)
Frame = +3
Query: 255 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 434
+ +R ++ E++ R+V +L+ VV KLIPDSI +D I+PL +RKVKVLK+P
Sbjct: 87 KKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKKP 146
Query: 435 RFEISKLMELH 467
+ ++ +++ELH
Sbjct: 147 KLDLGRILELH 157
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 103 bits (246), Expect = 4e-21
Identities = 47/101 (46%), Positives = 67/101 (66%)
Frame = +1
Query: 4 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 183
+ +FRK +L + VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+
Sbjct: 78 DHAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRL 137
Query: 184 FCIGFTNKDSLSQRKTCYAQHTQVEQSERKCVKSLHATSLT 306
F I T + +KT YA +Q+ RK + + + T
Sbjct: 138 FAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREAST 178
Score = 86.6 bits (205), Expect = 4e-16
Identities = 39/71 (54%), Positives = 56/71 (78%)
Frame = +3
Query: 255 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 434
RAIR+KM EII R+ + L+++ NKLIP+ I ++IEKA GIYPL++V IRKVK+LK+P
Sbjct: 162 RAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQP 221
Query: 435 RFEISKLMELH 467
+F++ L+ LH
Sbjct: 222 KFDLGGLLALH 232
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 98.7 bits (235), Expect = 8e-20
Identities = 44/93 (47%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Frame = +1
Query: 4 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 183
++++RK +L+ + V GRN +F+G+D+T D+L M++KWQTLIEA +D KT DGY++RV
Sbjct: 81 DKAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRV 140
Query: 184 FCIGFTNKDSL---SQRKTCYAQHTQVEQSERK 273
F + FT K S S TCYA+ +QV RK
Sbjct: 141 FTLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRK 173
Score = 62.5 bits (145), Expect = 7e-09
Identities = 30/71 (42%), Positives = 44/71 (61%)
Frame = +3
Query: 255 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 434
RAIR+K+ IT + + E LI + K IEK I+PL+++ IRKVKVLKRP
Sbjct: 168 RAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRP 227
Query: 435 RFEISKLMELH 467
+ + +K+ EL+
Sbjct: 228 KLDATKIAELY 238
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 97.9 bits (233), Expect = 1e-19
Identities = 45/89 (50%), Positives = 66/89 (74%)
Frame = +1
Query: 22 FRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 201
++ E V G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT
Sbjct: 86 YKFKCEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFT 145
Query: 202 NKDSLSQRKTCYAQHTQVEQSERKCVKSL 288
++ S +KT YA+ Q+++ RK + +L
Sbjct: 146 SRKSNQIKKTSYAKSAQIKKI-RKIMNNL 173
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 89.8 bits (213), Expect = 4e-17
Identities = 37/95 (38%), Positives = 59/95 (62%)
Frame = +1
Query: 4 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 183
E ++RK R + VQGRN+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+
Sbjct: 81 EEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRL 140
Query: 184 FCIGFTNKDSLSQRKTCYAQHTQVEQSERKCVKSL 288
F + FT + Q + CYA+ V+ + K +
Sbjct: 141 FVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMI 175
Score = 49.2 bits (112), Expect = 7e-05
Identities = 20/69 (28%), Positives = 45/69 (65%)
Frame = +3
Query: 261 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 440
+R ++ ++I R ++ +++E V+ L + ++ + + C+ I PLR++ IRKV+V++ P+F
Sbjct: 167 LRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKF 226
Query: 441 EISKLMELH 467
+ L+ H
Sbjct: 227 DAQALLSAH 235
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 87.4 bits (207), Expect = 2e-16
Identities = 39/93 (41%), Positives = 61/93 (65%)
Frame = +1
Query: 4 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 183
+ ++RK +LI + V+G +F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+
Sbjct: 77 QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRI 136
Query: 184 FCIGFTNKDSLSQRKTCYAQHTQVEQSERKCVK 282
F I FT QRKT YAQ +Q++ +K V+
Sbjct: 137 FVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVE 169
Score = 61.7 bits (143), Expect = 1e-08
Identities = 26/69 (37%), Positives = 48/69 (69%)
Frame = +3
Query: 261 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 440
IRKK+ EI+ ++V+ + +++ +S+AK+I KA I+PL+++ +RKVK++KRP+
Sbjct: 163 IRKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKVKLVKRPKV 222
Query: 441 EISKLMELH 467
+ KL E +
Sbjct: 223 DAQKLREFY 231
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 82.6 bits (195), Expect = 6e-15
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = +3
Query: 327 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 467
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 47
Score = 33.1 bits (72), Expect = 4.8
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 506 VERPEGYEPPVQESV 550
VER EGYEPPVQESV
Sbjct: 65 VERAEGYEPPVQESV 79
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 80.6 bits (190), Expect = 2e-14
Identities = 32/58 (55%), Positives = 47/58 (81%)
Frame = +3
Query: 294 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 467
D ++L+EV+NKL+PD++ KD+EKAC IYPL DV +RKVK+L++P+ ++ KL ELH
Sbjct: 158 DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQKPKLDLGKLPELH 215
Score = 76.2 bits (179), Expect = 5e-13
Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +1
Query: 16 RKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIG 195
RKF+LI E ++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC+G
Sbjct: 67 RKFKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVG 125
Query: 196 F-TNKDSLSQRKTCYAQHTQVEQ 261
+ TN + R+ AQ+ QV Q
Sbjct: 126 YTTNVTTRYARQLVCAQYQQVHQ 148
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 71.3 bits (167), Expect = 1e-11
Identities = 37/86 (43%), Positives = 51/86 (59%)
Frame = +1
Query: 16 RKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIG 195
RKF ++G + F GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G
Sbjct: 34 RKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMG 93
Query: 196 FTNKDSLSQRKTCYAQHTQVEQSERK 273
T + +KTCY +H+ E+ RK
Sbjct: 94 VTRRHPGYVKKTCYVKHSD-EKKIRK 118
Score = 48.4 bits (110), Expect = 1e-04
Identities = 19/58 (32%), Positives = 40/58 (68%)
Frame = +3
Query: 255 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 428
+ IRK M ++I +++ ++++++ KL +++ K IE+ I+PL++ C+RKVK +K
Sbjct: 114 KKIRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIK 171
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 69.3 bits (162), Expect = 6e-11
Identities = 33/80 (41%), Positives = 50/80 (62%)
Frame = +1
Query: 49 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 228
G V F GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K + S +
Sbjct: 89 GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKN 148
Query: 229 TCYAQHTQVEQSERKCVKSL 288
YA + Q +K+L
Sbjct: 149 HTYANSHKARQVRDVMIKAL 168
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 68.1 bits (159), Expect = 1e-10
Identities = 33/91 (36%), Positives = 49/91 (53%)
Frame = +1
Query: 19 KFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 198
KF L + V L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF I F
Sbjct: 83 KFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAF 142
Query: 199 TNKDSLSQRKTCYAQHTQVEQSERKCVKSLH 291
T++ +RK C+ + + ++LH
Sbjct: 143 TDRFRFQRRKNCHVKGRVIRMMRAGIYETLH 173
Score = 37.5 bits (83), Expect = 0.22
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +3
Query: 255 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 434
R +R + E + ++ + +V KL + + +A I RDV IR+VKV+KRP
Sbjct: 162 RMMRAGIYETLHNELGKVSIPVLVTKLSNFEVNAKLTEALQKITMCRDVMIRRVKVVKRP 221
Query: 435 RFEISKLMELH 467
R + L +H
Sbjct: 222 RNTMELLSTMH 232
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 62.9 bits (146), Expect = 5e-09
Identities = 28/68 (41%), Positives = 40/68 (58%)
Frame = +1
Query: 70 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 249
FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT Y +
Sbjct: 96 FHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSS 155
Query: 250 QVEQSERK 273
Q R+
Sbjct: 156 QKRALRRR 163
Score = 44.4 bits (100), Expect = 0.002
Identities = 18/58 (31%), Positives = 39/58 (67%)
Frame = +3
Query: 255 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 428
RA+R+++ +II ++ N ++++ ++++ I + IE C I+P+ V IRK+KV++
Sbjct: 158 RALRRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 46.8 bits (106), Expect = 4e-04
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1
Query: 19 KFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 198
K + V+G L F G++LT D +R +V+K + + A +VKT DG V+R+ +G
Sbjct: 74 KLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGI 133
Query: 199 T 201
T
Sbjct: 134 T 134
Score = 38.7 bits (86), Expect = 0.096
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3
Query: 258 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 434
A+RKKM E + + + + + +++ ++A D+ I P+R V I K+KVLK P
Sbjct: 145 AMRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVAKKIAPMRKVEIAKIKVLKYP 203
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 46.4 bits (105), Expect = 5e-04
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = +1
Query: 76 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 225
G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K + S +
Sbjct: 84 GHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKRARSSQ 133
Score = 35.5 bits (78), Expect = 0.89
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +3
Query: 213 LEPTQDVLRPAHSGR--AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIY 386
++PT ++ A S + AIR+ M +I+ + + ++ + + I ++ I + IY
Sbjct: 119 VKPTCFTIKRARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAKFIY 178
Query: 387 PLRDVCIRKVKVLKRP 434
PLR V IRK +V P
Sbjct: 179 PLRRVEIRKTQVEAMP 194
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 45.6 bits (103), Expect = 8e-04
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +1
Query: 43 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 222
VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S
Sbjct: 77 VQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSS 136
Query: 223 RKT 231
KT
Sbjct: 137 IKT 139
Score = 41.1 bits (92), Expect = 0.018
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +3
Query: 261 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 440
IRKK+ E +T E V +I D +++ K IYP+R + IRK +VL P
Sbjct: 141 IRKKIQEYLTEKARAMTFSEYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFPEE 200
Query: 441 EISKLM 458
+I +L+
Sbjct: 201 KIVELV 206
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 42.3 bits (95), Expect = 0.008
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = +3
Query: 393 RDVCIRKVKVLKRPRFEISKLMELH 467
R +C++KVK+LK+P+FE+ KLMELH
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELH 87
Score = 33.1 bits (72), Expect = 4.8
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 506 VERPEGYEPPVQESV 550
VER EGYEPPVQESV
Sbjct: 105 VERAEGYEPPVQESV 119
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 41.9 bits (94), Expect = 0.010
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 43 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LS 219
V+G F G L D +R +V++ + I+ IDV T DGY +RV + FT + + S
Sbjct: 66 VEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFTTRRAKTS 125
Query: 220 QRKTCYAQHTQV-EQSERKC 276
Q++ + +V E++ ++C
Sbjct: 126 QQRAIRKEMFKVIEENAKEC 145
Score = 41.1 bits (92), Expect = 0.018
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Frame = +3
Query: 255 RAIRKKMCEIITRDVTNSELREVVNKLIP----DSIAKDIEKACHGIYPLRDVCIRKVKV 422
RAIRK+M ++I + + E + + + +SI + I++A IYP+R IRK +V
Sbjct: 128 RAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAEIRKTEV 187
Query: 423 LKRP 434
L+ P
Sbjct: 188 LEEP 191
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 40.7 bits (91), Expect = 0.024
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +1
Query: 37 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 207
E + G + +F G +LT D +R +VK+ + I+AN+ V T DG+ +RV I T K
Sbjct: 70 EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIVLTVK 126
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 39.9 bits (89), Expect = 0.041
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 183
+ +++K V G N F +LT + L + ++ + IE +DV T DGY LRV
Sbjct: 63 QNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRV 122
Query: 184 FCIGFT-NKDSLSQRKTCYAQHTQV 255
+ FT + SQ++ A Q+
Sbjct: 123 KSVVFTVRRCKTSQKRAIRAIMRQI 147
Score = 35.9 bits (79), Expect = 0.68
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +3
Query: 255 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 434
RAIR M +I+ ++ + + + + + +I K IYP+R V IRK+++L P
Sbjct: 138 RAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYKNAKKIYPIRRVEIRKIELLAEP 197
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 38.7 bits (86), Expect = 0.096
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 43 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 222
V+G F G +L D +R + ++ + + +V T DGY LRV + FT + +
Sbjct: 70 VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFTRQRCKTS 129
Query: 223 RKTCYAQHTQ--VEQSERK 273
+K+ + Q VEQ R+
Sbjct: 130 QKSAIRKVMQEIVEQKARE 148
Score = 35.9 bits (79), Expect = 0.68
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +3
Query: 258 AIRKKMCEIITRDVTNSELREVVNKLI----PDSIAKDIEKACHGIYPLRDVCIRKVKVL 425
AIRK M EI+ + S L E++ ++ S+A I+++ IYPLR V I K K+L
Sbjct: 133 AIRKVMQEIVEQKARESTLDELIQLMVFSDHEGSLAYLIDESARKIYPLRKVEIAKSKLL 192
Query: 426 KRP 434
P
Sbjct: 193 WVP 195
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 38.3 bits (85), Expect = 0.13
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +1
Query: 43 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 222
V G N F G D T + L+ V++ ++ I A ++V+T DG+ +RV + T +
Sbjct: 79 VSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDH 138
Query: 223 RKT 231
KT
Sbjct: 139 HKT 141
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 37.1 bits (82), Expect = 0.29
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 4 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTD 96
E +FRKF+LI E VQG+ L NF M L+ D
Sbjct: 78 EVAFRKFKLITEDVQGKRCLINFRSMGLSCD 108
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 37.1 bits (82), Expect = 0.29
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 82 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRK 228
+LT D LR +V++ + +EA+I V TTD Y +RV + T K + SQ K
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKKADRSQEK 132
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 36.7 bits (81), Expect = 0.39
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +1
Query: 46 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 201
+G + F G +L+ D +R +V++ + I +D+ T DG+ LRV + T
Sbjct: 79 EGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLALT 130
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 35.5 bits (78), Expect = 0.89
Identities = 21/63 (33%), Positives = 38/63 (60%)
Frame = +1
Query: 19 KFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 198
+FR ++E V G++ L F G T+ +R +++++ I+ IDV T DGY++R+ +
Sbjct: 78 RFR-VSETV-GQDALTTFVGHHHQTNHIRRQIRRYRGKIDDVIDVVTEDGYLVRIKPLII 135
Query: 199 TNK 207
T K
Sbjct: 136 TQK 138
>UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3Ae -
Caldivirga maquilingensis IC-167
Length = 221
Score = 35.5 bits (78), Expect = 0.89
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = +3
Query: 261 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 437
IRK + + + + S+ +V I I D+ IYPLR V I K+KVL+ PR
Sbjct: 142 IRKSIMDRLDKVGQESDFDSLVRDSIMGKIQVDLFNVAKKIYPLRKVEIIKIKVLEYPR 200
>UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S3Ae - Thermofilum
pendens (strain Hrk 5)
Length = 207
Score = 34.3 bits (75), Expect = 2.1
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +3
Query: 255 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 434
+AIR+ M +II+ + + + + + ++A +++ IYP++ V + K+KVL P
Sbjct: 133 KAIRRIMFDIISEKAASLDFDTFIQQAVIGTMATEMQMQAKKIYPIKKVEVYKIKVL-TP 191
Query: 435 RFEI 446
EI
Sbjct: 192 TTEI 195
>UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasmatales|Rep: 30S ribosomal protein S3Ae -
Picrophilus torridus
Length = 209
Score = 33.9 bits (74), Expect = 2.7
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 261 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 431
+R K+ I + L E+ +I D++ DI +YP++ + IRK +VL R
Sbjct: 137 VRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIVDTLKDVYPIKKIEIRKSEVLGR 193
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 33.9 bits (74), Expect = 2.7
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 82 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRK 228
+LT D LR +V++ + +EA I V TTD Y +++ + T K + SQ K
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKKADASQEK 132
Score = 33.9 bits (74), Expect = 2.7
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +3
Query: 243 AHSGRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 422
A +AIR+ M +++ + ++++ ++ ++ I IYPLR V I+K +
Sbjct: 128 ASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKDIYPLRRVEIKKTTL 187
Query: 423 LKRP 434
RP
Sbjct: 188 EARP 191
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 33.1 bits (72), Expect = 4.8
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +1
Query: 7 RSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 186
+ + K R + V G F G TTD +R M+++ + I+A+ VKT D +++
Sbjct: 62 KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLH 121
Query: 187 CIGFTNKDSLSQRK 228
+ T + + S ++
Sbjct: 122 VLAVTTRRAKSSQQ 135
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 33.1 bits (72), Expect = 4.8
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +1
Query: 70 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 228
F + + + LR +V++ + + +DVKT+DGYV R+ + T + + +K
Sbjct: 82 FKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia
endosymbiont strain TRS of Brugia malayi|Rep: Predicted
protein, WF-1 - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 128
Score = 32.7 bits (71), Expect = 6.3
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 276 CEIITRDVTNSELREVVNK---LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 443
CE + D+ N ++VNK + D + DI+ I +DV I VKV+ P+ E
Sbjct: 42 CEKVKSDLKNPAYEDIVNKDTQIQEDGLVVDIDNCYFYIKYPQDVIIEVVKVINSPKVE 100
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 6.3
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 80 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 205
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_A6FVI8 Cluster: Surface repeat protein, putative; n=2;
cellular organisms|Rep: Surface repeat protein, putative
- Roseobacter sp. AzwK-3b
Length = 5954
Score = 32.7 bits (71), Expect = 6.3
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -2
Query: 512 VRLVSGFPLASTAFAVKFHQLR-DLETGPLQHFHLSDANIAQRVDAMAGLLDVLGNGV 342
+RL + P+ V QL D+ TGP+ H + D Q V A GL+D+ GNG+
Sbjct: 5490 LRLGALVPVGPDGLGVALDQLDLDVTTGPV-HLNERDGIDLQSVIARDGLIDIFGNGL 5546
>UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 363
Score = 32.7 bits (71), Expect = 6.3
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 309 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 461
EL V + +P + AK + CH Y L D ++ +K RFE L+E
Sbjct: 60 ELLWEVTRHLPPASAKMLAYTCHKFYHLSDTWLKNIKFFPVERFETLCLLE 110
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 32.7 bits (71), Expect = 6.3
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +3
Query: 261 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 440
IRK + + I + E V LI D I D+ A IYPL+ + +RK +++
Sbjct: 138 IRKVLTDFILNKGLSLPYSEFVRYLIGDDIYNDMISATKDIYPLKKIEVRKSELV----- 192
Query: 441 EISKLMELH 467
+S + E+H
Sbjct: 193 SLSGISEIH 201
>UniRef50_UPI000155EEEB Cluster: PREDICTED: similar to leukocyte
immunoglobulin-like receptor; n=2; Laurasiatheria|Rep:
PREDICTED: similar to leukocyte immunoglobulin-like
receptor - Equus caballus
Length = 618
Score = 32.3 bits (70), Expect = 8.3
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -1
Query: 459 PSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQES 334
P R A + P H RC+G PS P+ WSQ S
Sbjct: 175 PRIHHGRWQALFPVGPVNTSHGGTYRCYGSPSSYPYAWSQPS 216
>UniRef50_UPI000051ABD5 Cluster: PREDICTED: similar to ric8a
CG15797-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to ric8a CG15797-PA - Apis mellifera
Length = 453
Score = 32.3 bits (70), Expect = 8.3
Identities = 15/59 (25%), Positives = 34/59 (57%)
Frame = +3
Query: 162 RWIRSTCLLHWFHQ*GLLEPTQDVLRPAHSGRAIRKKMCEIITRDVTNSELREVVNKLI 338
R +++ L+ + + +L P +DV+ G +R K+C+++T + ELR++V + +
Sbjct: 258 RMVKAERLIRKYTRLQILPPLKDVMHRPEEGTTLRAKLCKLLTSPLI--ELRDLVAEFL 314
>UniRef50_Q3WJB7 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 283
Score = 32.3 bits (70), Expect = 8.3
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 189 HWFHQ*GLLEPTQDVLRPAHSGRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 365
HWF Q G P D LR + R ++C+ TR + ++ +L+P DIE
Sbjct: 172 HWFRQPG--GPDYDTLRDVPTERIHVLQLCDAPTRPADDLRTETIIARLLPGDGDADIE 228
>UniRef50_Q01HQ6 Cluster: OSIGBa0153E02-OSIGBa0093I20.19 protein;
n=42; Oryza sativa|Rep: OSIGBa0153E02-OSIGBa0093I20.19
protein - Oryza sativa (Rice)
Length = 1752
Score = 32.3 bits (70), Expect = 8.3
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 35 PNMCK-DVMCSATSTAWTSQPISSGGWLKNGRL--SSKPTLM*RQPMDTFYVSSALVSPI 205
P CK + WTS P+++ GW NGR+ + PTL Q + ++ A VS +
Sbjct: 1631 PGKCKLHAWLIIQNRVWTSDPLATRGWQNNGRVPPARTPTLGVAQSVKDWWEMLASVSGV 1690
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,746,893
Number of Sequences: 1657284
Number of extensions: 11429541
Number of successful extensions: 34196
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 32990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34190
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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