Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30272
(573 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X98186-1|CAA66861.1| 269|Anopheles gambiae put. S3a ribosomal p... 150 3e-38
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 27 0.57
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 25 1.7
AY062207-1|AAL58568.1| 504|Anopheles gambiae cytochrome P450 CY... 24 4.0
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 24 4.0
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 23 5.3
EF519382-1|ABP68491.1| 493|Anopheles gambiae LRIM1 protein. 23 9.3
AY344814-1|AAR03842.1| 286|Anopheles gambiae LRR Toll protein. 23 9.3
AY146739-1|AAO12099.1| 176|Anopheles gambiae odorant-binding pr... 23 9.3
AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein. 23 9.3
>X98186-1|CAA66861.1| 269|Anopheles gambiae put. S3a ribosomal
protein homologue protein.
Length = 269
Score = 150 bits (364), Expect = 3e-38
Identities = 68/91 (74%), Positives = 79/91 (86%)
Frame = +1
Query: 1 AERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLR 180
AERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MV KWQTLIE ++DVKTTDG++LR
Sbjct: 80 AERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLR 139
Query: 181 VFCIGFTNKDSLSQRKTCYAQHTQVEQSERK 273
VFCIGFT KDS+SQRKTCYAQH+Q++ K
Sbjct: 140 VFCIGFTIKDSMSQRKTCYAQHSQIKNIRAK 170
Score = 102 bits (244), Expect = 1e-23
Identities = 47/69 (68%), Positives = 58/69 (84%)
Frame = +3
Query: 261 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 440
IR KM II R++T+++L+ VV KL+PDSIAKDIEKAC +YPL DV IRKVKVLK+PRF
Sbjct: 167 IRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRF 226
Query: 441 EISKLMELH 467
++S LMELH
Sbjct: 227 DLSSLMELH 235
Score = 31.1 bits (67), Expect = 0.027
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2
Query: 506 VERPEGYEPPVQESV 550
V RPEGYEPPVQ SV
Sbjct: 255 VVRPEGYEPPVQASV 269
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 26.6 bits (56), Expect = 0.57
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 383 LPSARCLHPKGESVEEAPFRDLEVDGT 463
+P C H G ++E+A LE DGT
Sbjct: 557 MPPKGCSHDDGPALEKAQLYQLESDGT 583
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 25.0 bits (52), Expect = 1.7
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 430 GPVSRSRS*WNFTAKAVEARGKPETSRTAGGLRASRSR 543
G SRSRS +++ A+G SR+ G SRSR
Sbjct: 1094 GSRSRSRSRSRSRSRSGSAKGSRSRSRSGSGGSRSRSR 1131
>AY062207-1|AAL58568.1| 504|Anopheles gambiae cytochrome P450
CYP6S2 protein.
Length = 504
Score = 23.8 bits (49), Expect = 4.0
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 193 GF-TNKDSLSQRKTCYAQHTQVEQSERKCVKS 285
GF T+ +L+ AQH + ++ RKCV+S
Sbjct: 304 GFETSTTTLTFALHLLAQHPKAQRKARKCVRS 335
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 23.8 bits (49), Expect = 4.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -2
Query: 413 LSDANIAQRVDAMAGLLDVLGNGVRNQLV 327
L+ AN QR++ L D++G+ RN+++
Sbjct: 560 LAIANALQRINTPKYLYDIIGDYFRNRVL 588
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.4 bits (48), Expect = 5.3
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = -1
Query: 438 NGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQESTCSP 322
NG + G H G RPSR ++ S C P
Sbjct: 146 NGLGLEVLNIGTSHTFRGCGSARPSRIDVAFASPSICRP 184
>EF519382-1|ABP68491.1| 493|Anopheles gambiae LRIM1 protein.
Length = 493
Score = 22.6 bits (46), Expect = 9.3
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 43 VQGRNVLCNFHGMDLTTDKLRWMVKKWQT 129
+QG+ V +DL+++KL +M ++Q+
Sbjct: 206 IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 234
>AY344814-1|AAR03842.1| 286|Anopheles gambiae LRR Toll protein.
Length = 286
Score = 22.6 bits (46), Expect = 9.3
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 43 VQGRNVLCNFHGMDLTTDKLRWMVKKWQT 129
+QG+ V +DL+++KL +M ++Q+
Sbjct: 131 IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 159
>AY146739-1|AAO12099.1| 176|Anopheles gambiae odorant-binding
protein AgamOBP29 protein.
Length = 176
Score = 22.6 bits (46), Expect = 9.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 264 RKKMCEIITRDVTNSELRE 320
+ K+ +IT+D+ ELRE
Sbjct: 106 KHKVLHVITKDIREHELRE 124
>AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein.
Length = 722
Score = 22.6 bits (46), Expect = 9.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 275 HFLSDCST*VCWA*HVLRWLKESL 204
HFL+D V H+ W+K+SL
Sbjct: 17 HFLNDLKYPVLIRQHLGNWIKDSL 40
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,568
Number of Sequences: 2352
Number of extensions: 12382
Number of successful extensions: 41
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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