Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30271
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81124-4|CAB03372.1| 341|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z71186-7|CAM35835.1| 552|Caenorhabditis elegans Hypothetical pr... 32 0.51
U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated p... 31 1.2
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 31 1.2
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 31 1.2
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 31 1.2
AC006768-3|AAK70665.1| 246|Caenorhabditis elegans Hypothetical ... 30 1.6
AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical ... 30 1.6
Z81124-8|CAD56599.1| 426|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81124-5|CAB03374.1| 328|Caenorhabditis elegans Hypothetical pr... 29 3.6
U41263-3|AAC24425.1| 361|Caenorhabditis elegans Hypothetical pr... 29 3.6
AC024790-11|AAF60631.1| 199|Caenorhabditis elegans Hypothetical... 29 3.6
Z81124-3|CAB03373.1| 341|Caenorhabditis elegans Hypothetical pr... 29 4.8
U39999-5|AAA81106.1| 263|Caenorhabditis elegans Hypothetical pr... 29 4.8
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 4.8
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 4.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 4.8
AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family ... 29 4.8
AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family ... 29 4.8
AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family ... 29 4.8
AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family ... 29 4.8
AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family ... 29 4.8
Z74029-2|CAA98432.1| 334|Caenorhabditis elegans Hypothetical pr... 28 8.4
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 28 8.4
>Z81124-4|CAB03372.1| 341|Caenorhabditis elegans Hypothetical
protein T21B4.6 protein.
Length = 341
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = -3
Query: 280 VPSPSSIFVLEPIFSPFN*GSVHTFVISVSFIVTLSRCLNVSIDSVLCFYFVVV 119
+P P+ F EP F G +++++S ++ L+ +S+ S C Y++ +
Sbjct: 185 LPCPTKEFFTEPFFVLAAPGFWEDYMVTISSLLNLAIIFQISLFSTCCIYYLFI 238
>Z71186-7|CAM35835.1| 552|Caenorhabditis elegans Hypothetical
protein F23D12.10 protein.
Length = 552
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = -2
Query: 578 VASLDTNAPNVLSFRPRRLQNQVNSNIKFQISSE*VPCLEFCRCCPLPDLRPTSRSY 408
V S +++P F P++ ++ + K Q +++ C++F C LPDL P +++
Sbjct: 457 VVSEYSSSPIAAIFSPKKDSHEFADSNKLQKTTKPSICMKFGNCGRLPDLEPNKKNW 513
>U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated
protein 2, isoform d protein.
Length = 286
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 6/64 (9%)
Frame = +2
Query: 89 YRRHEPPCSADHYKVKAEDAV-----YANVQAPRKSHDETY-ADYESVDTPLVERRKNWF 250
YR PP S Y++ D + Y ++ R SHD Y D + P ++
Sbjct: 19 YRTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRSSHDPQYHQDQQQQQQPHHQQHSQHL 78
Query: 251 QHKY 262
QH +
Sbjct: 79 QHSH 82
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 6/64 (9%)
Frame = +2
Query: 89 YRRHEPPCSADHYKVKAEDAV-----YANVQAPRKSHDETY-ADYESVDTPLVERRKNWF 250
YR PP S Y++ D + Y ++ R SHD Y D + P ++
Sbjct: 1659 YRTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRSSHDPQYHQDQQQQQQPHHQQHSQHL 1718
Query: 251 QHKY 262
QH +
Sbjct: 1719 QHSH 1722
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 6/64 (9%)
Frame = +2
Query: 89 YRRHEPPCSADHYKVKAEDAV-----YANVQAPRKSHDETY-ADYESVDTPLVERRKNWF 250
YR PP S Y++ D + Y ++ R SHD Y D + P ++
Sbjct: 1760 YRTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRSSHDPQYHQDQQQQQQPHHQQHSQHL 1819
Query: 251 QHKY 262
QH +
Sbjct: 1820 QHSH 1823
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 6/64 (9%)
Frame = +2
Query: 89 YRRHEPPCSADHYKVKAEDAV-----YANVQAPRKSHDETY-ADYESVDTPLVERRKNWF 250
YR PP S Y++ D + Y ++ R SHD Y D + P ++
Sbjct: 1760 YRTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRSSHDPQYHQDQQQQQQPHHQQHSQHL 1819
Query: 251 QHKY 262
QH +
Sbjct: 1820 QHSH 1823
>AC006768-3|AAK70665.1| 246|Caenorhabditis elegans Hypothetical
protein Y45G12B.2b protein.
Length = 246
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = -3
Query: 439 CPICDQQVAHIKTSCGAGEVAPRAGPLRDSNRQQNCVDFVRRGLPMNTPLKRTVPSPS 266
CP C Q+V EV+P LR+ +Q N GLP L R VPSP+
Sbjct: 34 CPCCSQEVFP-----PINEVSPLIEKLREQLKQSNWAR-AALGLPTLPELNRPVPSPA 85
>AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical
protein Y45G12B.2a protein.
Length = 309
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = -3
Query: 439 CPICDQQVAHIKTSCGAGEVAPRAGPLRDSNRQQNCVDFVRRGLPMNTPLKRTVPSPS 266
CP C Q+V EV+P LR+ +Q N GLP L R VPSP+
Sbjct: 97 CPCCSQEVFP-----PINEVSPLIEKLREQLKQSNWAR-AALGLPTLPELNRPVPSPA 148
>Z81124-8|CAD56599.1| 426|Caenorhabditis elegans Hypothetical
protein T21B4.14 protein.
Length = 426
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = -3
Query: 286 RTVPSPSSIFVLEPIFSPFN*GSVHTFVISVSFIVTLSRCLNVSIDSVLCFYFVVVS 116
+T+P P+ F LEP+ + G T+ I+ + S C Y++ +S
Sbjct: 264 KTLPCPTKEFFLEPVLVFASGGFWETYQTRARSIINALTTFQILFFSATCIYYLFIS 320
>Z81124-5|CAB03374.1| 328|Caenorhabditis elegans Hypothetical
protein T21B4.7 protein.
Length = 328
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = -3
Query: 292 LKRTVPSPSSIFVLEP--IFSPFN*GSVHTFVISVSF-IVTLSRCLNVSIDSVLCFYFVV 122
L +T+P P+ + LEP +F+P G+ ++ SF ++ L+ L V S C Y++
Sbjct: 176 LLKTIPCPTKKYFLEPSVVFTP---GTFWDTYLTSSFKLILLATGLQVLFFSSCCIYYLF 232
Query: 121 V 119
V
Sbjct: 233 V 233
>U41263-3|AAC24425.1| 361|Caenorhabditis elegans Hypothetical
protein T19D12.5 protein.
Length = 361
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +2
Query: 260 YRGWARYGPLQ--RRIHREASSDEIDTILLSIRVPKRASPWRHLPRTTRCLYMSDLLVAN 433
+RG RY ++ RR + D + + + + PW+HL ++ + + +++ N
Sbjct: 230 FRGTTRYVSIRVHRRCEQSPYDDLVSVMYTAYELLAGELPWKHLEKSEEVVQLKEVMTEN 289
Query: 434 RAEGSIDKIQDTVLIHLIFEI 496
+ + +VLI ++
Sbjct: 290 GINPELFQGDKSVLIDFFKQV 310
>AC024790-11|AAF60631.1| 199|Caenorhabditis elegans Hypothetical
protein Y47D7A.12 protein.
Length = 199
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 271 GSVRSASTAYSSGGLFGRNRHNSVVYSSPEAGQPVA 378
GS + + SSGG+ G N N Y+S AG P A
Sbjct: 113 GSSPTYGGSLSSGGIVGGNSLNYGTYNSASAGTPAA 148
>Z81124-3|CAB03373.1| 341|Caenorhabditis elegans Hypothetical
protein T21B4.5 protein.
Length = 341
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/56 (21%), Positives = 27/56 (48%)
Frame = -3
Query: 286 RTVPSPSSIFVLEPIFSPFN*GSVHTFVISVSFIVTLSRCLNVSIDSVLCFYFVVV 119
+T+P P+ F EP G ++++ + ++ + VS+ S C Y++ +
Sbjct: 183 KTLPCPTKEFFTEPFIMLAAPGLWEDYMVTTTSLLNMGFIFQVSLFSSCCIYYLFI 238
>U39999-5|AAA81106.1| 263|Caenorhabditis elegans Hypothetical
protein F41G3.5 protein.
Length = 263
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 233 RRKNWFQHKYRGWARYGPLQRRIHREA-SSDEIDTIL-LSIRVPKRASPW 376
R W H +RG RY PL R++ ++++TI + + + PW
Sbjct: 117 RHPRWSVHGFRGTVRYAPLATHYGRDSCRKEDLETIFYVLVELLVGTLPW 166
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 128 KVKAEDAVYANVQAPRKSHDETYADYE-SVDTPLVERRKNWFQHKYRGWARYGPLQRRIH 304
K+K E+ A ++ ++H E +YE S+D P+ E N + GP Q
Sbjct: 1551 KLKLENVSVALIKEGDRAHQELVIEYESSIDEPMFEPVHNTSHLTFHQQQPTGPDQHVWS 1610
Query: 305 REASSDEIDTILLSIRV 355
R + +E + ++++ V
Sbjct: 1611 RRSKFEEDEAHVVAVFV 1627
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 128 KVKAEDAVYANVQAPRKSHDETYADYE-SVDTPLVERRKNWFQHKYRGWARYGPLQRRIH 304
K+K E+ A ++ ++H E +YE S+D P+ E N + GP Q
Sbjct: 1551 KLKLENVSVALIKEGDRAHQELVIEYESSIDEPMFEPVHNTSHLTFHQQQPTGPDQHVWS 1610
Query: 305 REASSDEIDTILLSIRV 355
R + +E + ++++ V
Sbjct: 1611 RRSKFEEDEAHVVAVFV 1627
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 128 KVKAEDAVYANVQAPRKSHDETYADYE-SVDTPLVERRKNWFQHKYRGWARYGPLQRRIH 304
K+K E+ A ++ ++H E +YE S+D P+ E N + GP Q
Sbjct: 1551 KLKLENVSVALIKEGDRAHQELVIEYESSIDEPMFEPVHNTSHLTFHQQQPTGPDQHVWS 1610
Query: 305 REASSDEIDTILLSIRV 355
R + +E + ++++ V
Sbjct: 1611 RRSKFEEDEAHVVAVFV 1627
>AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform g protein.
Length = 1769
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 128 KVKAEDAVYANVQAPRKSHDETYADYE-SVDTPLVERRKNWFQHKYRGWARYGPLQRRIH 304
K+K E+ A ++ ++H E +YE S+D P+ E N + GP Q
Sbjct: 1551 KLKLENVSVALIKEGDRAHQELVIEYESSIDEPMFEPVHNTSHLTFHQQQPTGPDQHVWS 1610
Query: 305 REASSDEIDTILLSIRV 355
R + +E + ++++ V
Sbjct: 1611 RRSKFEEDEAHVVAVFV 1627
>AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform f protein.
Length = 1769
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 128 KVKAEDAVYANVQAPRKSHDETYADYE-SVDTPLVERRKNWFQHKYRGWARYGPLQRRIH 304
K+K E+ A ++ ++H E +YE S+D P+ E N + GP Q
Sbjct: 1551 KLKLENVSVALIKEGDRAHQELVIEYESSIDEPMFEPVHNTSHLTFHQQQPTGPDQHVWS 1610
Query: 305 REASSDEIDTILLSIRV 355
R + +E + ++++ V
Sbjct: 1611 RRSKFEEDEAHVVAVFV 1627
>AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform e protein.
Length = 1769
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 128 KVKAEDAVYANVQAPRKSHDETYADYE-SVDTPLVERRKNWFQHKYRGWARYGPLQRRIH 304
K+K E+ A ++ ++H E +YE S+D P+ E N + GP Q
Sbjct: 1551 KLKLENVSVALIKEGDRAHQELVIEYESSIDEPMFEPVHNTSHLTFHQQQPTGPDQHVWS 1610
Query: 305 REASSDEIDTILLSIRV 355
R + +E + ++++ V
Sbjct: 1611 RRSKFEEDEAHVVAVFV 1627
>AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform d protein.
Length = 1769
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 128 KVKAEDAVYANVQAPRKSHDETYADYE-SVDTPLVERRKNWFQHKYRGWARYGPLQRRIH 304
K+K E+ A ++ ++H E +YE S+D P+ E N + GP Q
Sbjct: 1551 KLKLENVSVALIKEGDRAHQELVIEYESSIDEPMFEPVHNTSHLTFHQQQPTGPDQHVWS 1610
Query: 305 REASSDEIDTILLSIRV 355
R + +E + ++++ V
Sbjct: 1611 RRSKFEEDEAHVVAVFV 1627
>AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform c protein.
Length = 1769
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 128 KVKAEDAVYANVQAPRKSHDETYADYE-SVDTPLVERRKNWFQHKYRGWARYGPLQRRIH 304
K+K E+ A ++ ++H E +YE S+D P+ E N + GP Q
Sbjct: 1551 KLKLENVSVALIKEGDRAHQELVIEYESSIDEPMFEPVHNTSHLTFHQQQPTGPDQHVWS 1610
Query: 305 REASSDEIDTILLSIRV 355
R + +E + ++++ V
Sbjct: 1611 RRSKFEEDEAHVVAVFV 1627
>Z74029-2|CAA98432.1| 334|Caenorhabditis elegans Hypothetical
protein C45B11.4 protein.
Length = 334
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -3
Query: 292 LKRTVPSPSSIFVLEPIFSPFN*GSVHTFVISVSFIVTLSRCLNVSIDSVLCFYFVVVS 116
L +T+P P+ F IF HT++ + I+ + + V+ + C Y++ S
Sbjct: 183 LLQTIPCPTEEFFYSEIFVLATDDFWHTYLWMFTTIIVIGIFIQVAFFFLCCLYYIYFS 241
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 80 SEHYRRHEPPCSADHYK---VKAEDAVYANVQ-APRKSHDETYADYESVDTPLVER 235
S+ Y P +AD ++ ED +Y + A R +++ ++ ++V TP+VER
Sbjct: 592 SDQYAEFITPAAADEFRSVLTSTEDWLYDEGEDAERDVYEKRLSELKAVGTPVVER 647
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,743,858
Number of Sequences: 27780
Number of extensions: 384337
Number of successful extensions: 1108
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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