Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30267
         (728 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9BLL3 Cluster: Serpin-like protein; n=1; Bombyx mori|R...    49   1e-04
UniRef50_Q23MA0 Cluster: TBC domain containing protein; n=2; Alv...    38   0.33 
UniRef50_Q09863 Cluster: Uncharacterized protein C29E6.10c; n=1;...    36   1.3  
UniRef50_UPI000155D015 Cluster: PREDICTED: similar to G protein-...    35   2.3  
UniRef50_Q6FTY2 Cluster: Candida glabrata strain CBS138 chromoso...    34   3.1  
UniRef50_A3ETX7 Cluster: Outer membrane receptor for Fe3+-dicitr...    34   4.1  
UniRef50_A5DP01 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_Q9P0V3 Cluster: SH3 domain-binding protein 4; n=40; Eut...    33   9.5  

>UniRef50_Q9BLL3 Cluster: Serpin-like protein; n=1; Bombyx mori|Rep:
           Serpin-like protein - Bombyx mori (Silk moth)
          Length = 387

 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 27/42 (64%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
 Frame = +1

Query: 484 FQTQVTRPG-SIVSIML*HILGINIFKQITSSQPGNMVVSPF 606
           FQ Q TRP    +   + H  GINIFKQITSSQ GNMVVSPF
Sbjct: 6   FQAQATRPEIDSIDYPITHF-GINIFKQITSSQSGNMVVSPF 46



 Score = 42.3 bits (95), Expect = 0.012
 Identities = 34/78 (43%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
 Frame = +3

Query: 483 FSNASNTTRIDSVDYAITHFG-NKYI*ANNKQSAR*HGGISISP--SRHYWALLQQGATG 653
           F   +    IDS+DY ITHFG N +    + QS    G + +SP       ALLQQGATG
Sbjct: 6   FQAQATRPEIDSIDYPITHFGINIFKQITSSQS----GNMVVSPFSITTLLALLQQGATG 61

Query: 654 IPLWDQISGSFCI*APFK 707
             L DQIS +  + AP K
Sbjct: 62  STL-DQISAALHL-APLK 77


>UniRef50_Q23MA0 Cluster: TBC domain containing protein; n=2;
            Alveolata|Rep: TBC domain containing protein -
            Tetrahymena thermophila SB210
          Length = 2075

 Score = 37.5 bits (83), Expect = 0.33
 Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
 Frame = +2

Query: 200  ESVSQIRFHNQFRSNLF*HNRPSGSINIQKELSNLNGLTIGTKIPIINPNFGAPQYSPYA 379
            E  +QI  +NQ  +N    N  S  + I K +S  N LT     P+        QY P  
Sbjct: 1353 EQYTQI-LNNQQNNNSSNSNNNSEMLQISKSISQQNSLTSFNNPPLSQNQNLQNQYQPSN 1411

Query: 380  NNVIIQPSIQT---YNQETTKIVPQ 445
             N IIQ  IQ+   YNQ+  ++  Q
Sbjct: 1412 QNAIIQNQIQSKIQYNQQQVQLPQQ 1436


>UniRef50_Q09863 Cluster: Uncharacterized protein C29E6.10c; n=1;
            Schizosaccharomyces pombe|Rep: Uncharacterized protein
            C29E6.10c - Schizosaccharomyces pombe (Fission yeast)
          Length = 1085

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 22/77 (28%), Positives = 36/77 (46%)
 Frame = +2

Query: 224  HNQFRSNLF*HNRPSGSINIQKELSNLNGLTIGTKIPIINPNFGAPQYSPYANNVIIQPS 403
            H+  R+N   H+ P  +   Q+  +N   L  G  +P +  +F +PQ SP  N V+ +PS
Sbjct: 876  HSLSRANSPVHHYPFATPPSQR--ANKYPLNNGANVPALLNSFSSPQLSPLVNRVLNEPS 933

Query: 404  IQTYNQETTKIVPQKSG 454
                +  + K    K G
Sbjct: 934  SSPLSSSSLKSPLSKEG 950


>UniRef50_UPI000155D015 Cluster: PREDICTED: similar to G
           protein-coupled receptor 114; n=1; Ornithorhynchus
           anatinus|Rep: PREDICTED: similar to G protein-coupled
           receptor 114 - Ornithorhynchus anatinus
          Length = 661

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = +1

Query: 466 KDDRYVFQTQVTRPGSIVSIML*HILGINIFKQITSSQPGNMVVSPFLHHDIIGLFFNKA 645
           K+D  ++Q  +  PGS++ +    +L +     + S  PG + ++ FLH  ++      A
Sbjct: 244 KEDNCLWQIHINLPGSVLLLNGTFLLAV----ALASEGPGCVALASFLHFSLLSCLTWMA 299

Query: 646 LQGFH 660
           ++GFH
Sbjct: 300 IEGFH 304


>UniRef50_Q6FTY2 Cluster: Candida glabrata strain CBS138 chromosome
           F complete sequence; n=1; Candida glabrata|Rep: Candida
           glabrata strain CBS138 chromosome F complete sequence -
           Candida glabrata (Yeast) (Torulopsis glabrata)
          Length = 1049

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +3

Query: 240 QIYFDTTDLVALLIFKRNYLI*MD*RLEQKYRLLTPISELRNIVLMQTML*FNRQYKLIT 419
           QIY +T     +L+   N  I ++  L + Y  L+P+  ++  VL       ++ Y LI 
Sbjct: 522 QIYINTETAAGVLVEAVNMAISLELHLHKSYEGLSPLELIKRRVLWSYCFSVDKYYSLIL 581

Query: 420 KKPP 431
            +PP
Sbjct: 582 SRPP 585


>UniRef50_A3ETX7 Cluster: Outer membrane receptor for
           Fe3+-dicitrate; n=2; Leptospirillum sp. Group II
           UBA|Rep: Outer membrane receptor for Fe3+-dicitrate -
           Leptospirillum sp. Group II UBA
          Length = 974

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 20/77 (25%), Positives = 37/77 (48%)
 Frame = +2

Query: 266 SGSINIQKELSNLNGLTIGTKIPIINPNFGAPQYSPYANNVIIQPSIQTYNQETTKIVPQ 445
           +G+IN++ E+  +N L +G +            Y+ Y NN+    S+QT     T ++P 
Sbjct: 736 AGTINVKPEI--VNDLEVGARYSTDKGFVAFDVYNDYINNMFTT-SLQTLPSGVTNVLPD 792

Query: 446 KSGTPAKKMTDTFFKRK 496
            +G    +  +  FKR+
Sbjct: 793 SAGLAEMRGFEAEFKRE 809


>UniRef50_A5DP01 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 639

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +2

Query: 260 RPSGSINIQKELSNLNGLTIGTKIPIINPNFGAPQYSPYANNVIIQPSIQTYNQETTKIV 439
           RP+  +   KE++  +G    TKIP I+PN     +SP  + +I +P +  + Q +   +
Sbjct: 515 RPNYHLLNVKEIAKKSG---PTKIPSISPNHQVFLHSPERDTMISRPQLGHFRQSSRSTI 571

Query: 440 PQKSGTPAK 466
              S TP +
Sbjct: 572 AFPSPTPLR 580


>UniRef50_Q9P0V3 Cluster: SH3 domain-binding protein 4; n=40;
           Euteleostomi|Rep: SH3 domain-binding protein 4 - Homo
           sapiens (Human)
          Length = 963

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
 Frame = +2

Query: 257 NRPSGSINIQKELSNLNGLTIGTKIP----IINPNFGAPQYSPYAN-NVIIQPSIQTYNQ 421
           N P     + KEL  L G T   K+P      NP +   Q +P+ N NV + PS+   N 
Sbjct: 127 NLPDSPDEVAKELELLGGWTDDKKVPGRMYSNNPFWNGVQTNPFLNGNVPVMPSLDELNP 186

Query: 422 ETT 430
           ++T
Sbjct: 187 KST 189


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,182,799
Number of Sequences: 1657284
Number of extensions: 14565254
Number of successful extensions: 32380
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32363
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)