Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30264
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.6  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   7.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   7.4  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   7.4  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   7.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.8  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 184 LLQGSFRSFKKGTETKRETFG*H 252
           LLQ +++S   G +T   +FG H
Sbjct: 235 LLQDTYKSMLPGAQTVGASFGLH 257


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +3

Query: 555 FPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKREK 662
           F +    +KK+L   +E  + A +  +E   HK+++
Sbjct: 54  FQNRRMKLKKELRAVKEINEQARREREEQERHKQQQ 89


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +1

Query: 346 KALRKIQKTLKVIKSANKSVIEDVDRENTAVTLTGPEQPD 465
           ++LRK+   L VI+      +  + +E     LT  E P+
Sbjct: 78  RSLRKLNSRLFVIRGQPADALPKLFKEWGTTALTFEEDPE 117


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/46 (21%), Positives = 23/46 (50%)
 Frame = +1

Query: 373 LKVIKSANKSVIEDVDRENTAVTLTGPEQPDQDDYGYESQAAAAIL 510
           LK ++ A ++  +++ +    ++   P  PD    GY+  A ++ L
Sbjct: 226 LKELREAFEAEAQEIKKPALLLSAAVPVGPDNIKAGYDVPAVSSYL 271


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +3

Query: 540 PEEPKFPSSLKSVKKDLNGTRERVKNALQHEDEPVPH 650
           P+E    +S KSV    +  R R    L  ED   P+
Sbjct: 214 PQETPVLASYKSVPMSFSSPRRRHSINLLEEDNQKPN 250


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 143 AAQRNQQQKSSDHFYYKARLDPLKKEQRQK 232
           AAQ  Q   + +H  Y+A+L  +++   Q+
Sbjct: 132 AAQAGQPDNAIEHSDYRAKLAQIRQIYHQE 161


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +3

Query: 555 FPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKREK 662
           F +    +KK+L   +E  + A +  +E   HK+++
Sbjct: 205 FQNRRMKLKKELRAVKEINEQARREREEQERHKQQQ 240


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +3

Query: 555 FPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKREK 662
           F +    +KK+L   +E  + A +  +E   HK+++
Sbjct: 264 FQNRRMKLKKELRAVKEINEQARREREEQERHKQQQ 299


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 633 DEPVPHKREKAYWKLEKENPV 695
           D P+P     ++  L+++NPV
Sbjct: 140 DRPLPAPERPSFEGLKRQNPV 160


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 449  PVRVTAVFSLSTSSITDLL 393
            P+  T VFS  TSSI  LL
Sbjct: 1080 PIDYTLVFSKFTSSIRMLL 1098


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,868
Number of Sequences: 336
Number of extensions: 2887
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)