Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30264
(705 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38933-1|AAC41915.1| 203|Homo sapiens protein ( Homo sapiens GT... 34 0.57
AF440240-1|AAL33609.1| 217|Homo sapiens nuclear receptor coacti... 34 0.57
AB030304-1|BAA92872.1| 217|Homo sapiens TBP-1 interacting prote... 34 0.57
BC038505-1|AAH38505.2| 457|Homo sapiens BCL2-associated athanog... 33 0.75
AF111116-1|AAD05226.1| 457|Homo sapiens silencer of death domai... 33 0.75
AF095194-1|AAD16123.2| 457|Homo sapiens BAG-family molecular ch... 33 0.75
BC111950-1|AAI11951.1| 628|Homo sapiens zinc finger protein 528... 31 3.0
BC101712-1|AAI01713.1| 628|Homo sapiens zinc finger protein 528... 31 3.0
BC008792-1|AAH08792.1| 205|Homo sapiens PSMC3 interacting prote... 31 5.3
U66616-1|AAC50694.1| 1213|Homo sapiens SWI/SNF complex 170 KDa s... 30 7.0
BT009924-1|AAP88926.1| 1130|Homo sapiens SWI/SNF related, matrix... 30 7.0
BC026222-1|AAH26222.1| 1214|Homo sapiens SWI/SNF related, matrix... 30 7.0
BC013045-1|AAH13045.1| 1130|Homo sapiens SWI/SNF related, matrix... 30 7.0
AB209293-1|BAD92530.1| 1156|Homo sapiens SWI/SNF-related matrix-... 30 7.0
AB209006-1|BAD92243.1| 1164|Homo sapiens SWI/SNF-related matrix-... 30 7.0
>L38933-1|AAC41915.1| 203|Homo sapiens protein ( Homo sapiens GT198
mRNA, complete ORF. ).
Length = 203
Score = 33.9 bits (74), Expect = 0.57
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 498 CCHFAKMMEKYSKIPEEPKFPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKREKAYWKL 677
C + +++ S P+ ++ +KK+ G RER+KN + P ++E+ Y +
Sbjct: 106 CRYMEAELKELSSALTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRER 165
Query: 678 EK 683
+K
Sbjct: 166 QK 167
>AF440240-1|AAL33609.1| 217|Homo sapiens nuclear receptor
coactivator GT198 protein.
Length = 217
Score = 33.9 bits (74), Expect = 0.57
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 498 CCHFAKMMEKYSKIPEEPKFPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKREKAYWKL 677
C + +++ S P+ ++ +KK+ G RER+KN + P ++E+ Y +
Sbjct: 107 CRYMEAELKELSSALTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRER 166
Query: 678 EK 683
+K
Sbjct: 167 QK 168
>AB030304-1|BAA92872.1| 217|Homo sapiens TBP-1 interacting protein
protein.
Length = 217
Score = 33.9 bits (74), Expect = 0.57
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 498 CCHFAKMMEKYSKIPEEPKFPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKREKAYWKL 677
C + +++ S P+ ++ +KK+ G RER+KN + P ++E+ Y +
Sbjct: 107 CRYMEAELKELSSALTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRER 166
Query: 678 EK 683
+K
Sbjct: 167 QK 168
>BC038505-1|AAH38505.2| 457|Homo sapiens BCL2-associated athanogene
4 protein.
Length = 457
Score = 33.5 bits (73), Expect = 0.75
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +3
Query: 522 EKYSKIPEE--PKFPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKREKAYWKLEK 683
++ S +PEE P S+ S+KK ++ E+V+ Q +E V K +KAYW LE+
Sbjct: 360 DQSSSLPEECVPSDESTPPSIKKIIH-VLEKVQYLEQEVEEFVGKKTDKAYWLLEE 414
>AF111116-1|AAD05226.1| 457|Homo sapiens silencer of death domains
protein.
Length = 457
Score = 33.5 bits (73), Expect = 0.75
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +3
Query: 522 EKYSKIPEE--PKFPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKREKAYWKLEK 683
++ S +PEE P S+ S+KK ++ E+V+ Q +E V K +KAYW LE+
Sbjct: 360 DQSSSLPEECVPSDESTPPSIKKIIH-VLEKVQYLEQEVEEFVGKKTDKAYWLLEE 414
>AF095194-1|AAD16123.2| 457|Homo sapiens BAG-family molecular
chaperone regulator-4 protein.
Length = 457
Score = 33.5 bits (73), Expect = 0.75
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +3
Query: 522 EKYSKIPEE--PKFPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKREKAYWKLEK 683
++ S +PEE P S+ S+KK ++ E+V+ Q +E V K +KAYW LE+
Sbjct: 360 DQSSSLPEECVPSDESTPPSIKKIIH-VLEKVQYLEQEVEEFVGKKTDKAYWLLEE 414
>BC111950-1|AAI11951.1| 628|Homo sapiens zinc finger protein 528
protein.
Length = 628
Score = 31.5 bits (68), Expect = 3.0
Identities = 22/58 (37%), Positives = 26/58 (44%)
Frame = +3
Query: 495 GCCHFAKMMEKYSKIPEEPKFPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKREKAY 668
GC HF K + S + K SS+KS LN R +A E H REKAY
Sbjct: 131 GCKHFEKPVSDNSSVSPLEKISSSVKS--HLLNKYRNNFDHAPLLPQEQKAHIREKAY 186
>BC101712-1|AAI01713.1| 628|Homo sapiens zinc finger protein 528
protein.
Length = 628
Score = 31.5 bits (68), Expect = 3.0
Identities = 22/58 (37%), Positives = 26/58 (44%)
Frame = +3
Query: 495 GCCHFAKMMEKYSKIPEEPKFPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKREKAY 668
GC HF K + S + K SS+KS LN R +A E H REKAY
Sbjct: 131 GCKHFEKPVSDNSSVSPLEKISSSVKS--HLLNKYRNNFDHAPLLPQEQKAHIREKAY 186
>BC008792-1|AAH08792.1| 205|Homo sapiens PSMC3 interacting protein
protein.
Length = 205
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 546 EPKFPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKREKAYWKLEK 683
E + ++ +KK+ G RER+KN + P ++E+ Y + +K
Sbjct: 111 EAEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQK 156
>U66616-1|AAC50694.1| 1213|Homo sapiens SWI/SNF complex 170 KDa
subunit protein.
Length = 1213
Score = 30.3 bits (65), Expect = 7.0
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 540 PE-EPKFPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKREKAYW 671
PE EPK LK + K GT KN H PVP E+ W
Sbjct: 146 PEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPGNLEEEEW 190
>BT009924-1|AAP88926.1| 1130|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1130
Score = 30.3 bits (65), Expect = 7.0
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 540 PE-EPKFPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKREKAYW 671
PE EPK LK + K GT KN H PVP E+ W
Sbjct: 146 PEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPGNLEEEEW 190
>BC026222-1|AAH26222.1| 1214|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1214
Score = 30.3 bits (65), Expect = 7.0
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 540 PE-EPKFPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKREKAYW 671
PE EPK LK + K GT KN H PVP E+ W
Sbjct: 146 PEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPGNLEEEEW 190
>BC013045-1|AAH13045.1| 1130|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1130
Score = 30.3 bits (65), Expect = 7.0
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 540 PE-EPKFPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKREKAYW 671
PE EPK LK + K GT KN H PVP E+ W
Sbjct: 146 PEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPGNLEEEEW 190
>AB209293-1|BAD92530.1| 1156|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
c2 iso protein.
Length = 1156
Score = 30.3 bits (65), Expect = 7.0
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 540 PE-EPKFPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKREKAYW 671
PE EPK LK + K GT KN H PVP E+ W
Sbjct: 151 PEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPGNLEEEEW 195
>AB209006-1|BAD92243.1| 1164|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
c2 iso protein.
Length = 1164
Score = 30.3 bits (65), Expect = 7.0
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 540 PE-EPKFPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKREKAYW 671
PE EPK LK + K GT KN H PVP E+ W
Sbjct: 158 PEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPGNLEEEEW 202
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,515,271
Number of Sequences: 237096
Number of extensions: 1681671
Number of successful extensions: 4579
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4579
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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