Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30262
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.6  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   6.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.0  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 16/56 (28%), Positives = 22/56 (39%)
 Frame = +3

Query: 438 RSECGPHRVPD*LGALPPYPLPTGTYAPVISAEKAYHEQLSVAEITNACFRARQPD 605
           +S   PH   D     PP+P       PV +     +  LSV ++T  C R    D
Sbjct: 722 QSPLTPHEAFDVKLPPPPHPHHQPPRNPVGTNPHDINNPLSVNQLTGQCVRNDSSD 777


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 16/56 (28%), Positives = 22/56 (39%)
 Frame = +3

Query: 438 RSECGPHRVPD*LGALPPYPLPTGTYAPVISAEKAYHEQLSVAEITNACFRARQPD 605
           +S   PH   D     PP+P       PV +     +  LSV ++T  C R    D
Sbjct: 614 QSPLTPHEAFDVKLPPPPHPHHQPPRNPVGTNPHDINNPLSVNQLTGQCVRNDSSD 669


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +2

Query: 5   NYARGHYTIGKEIVDLVLDRIRKLADQCTG 94
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 346  YGGRCHRWLHC 314
            Y G C R+LHC
Sbjct: 1287 YPGDCTRYLHC 1297


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +1

Query: 151 FLIDGASLR*LRQEV*TGVRHLPRASGFHCRRRALNSILTTHTTLEHSD 297
           F+I    L  + ++V  G+ HL +    H    A N ++  + T++ SD
Sbjct: 587 FIIQPKHLLSIARQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSD 635


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 319 EAIYDICRRNLDIERPTYTNLNRLIGQIV 405
           E I DIC R+ D       ++NR+ G I+
Sbjct: 510 EQIVDICIRSHDKLCDVCDSVNRIFGFII 538


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,258
Number of Sequences: 336
Number of extensions: 4081
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)