Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30262
(751 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 91 4e-20
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 91 4e-20
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 91 4e-20
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 91 4e-20
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 90.6 bits (215), Expect = 4e-20
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
N+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L+ +S +T LRF
Sbjct: 80 NATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFP 139
Query: 436 GALNVDLTEFQTNLVPYPRIHF 501
G LN DL + N+VP+PR+HF
Sbjct: 140 GQLNADLRKLAVNMVPFPRLHF 161
Score = 58.0 bits (134), Expect = 3e-10
Identities = 28/77 (36%), Positives = 42/77 (54%)
Frame = +2
Query: 20 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 199
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 200 LEFAIYPAPQVSTAVVE 250
+++ P+P+VS VVE
Sbjct: 61 NTYSVVPSPKVSDTVVE 77
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 90.6 bits (215), Expect = 4e-20
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
N+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L+ +S +T LRF
Sbjct: 80 NATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFP 139
Query: 436 GALNVDLTEFQTNLVPYPRIHF 501
G LN DL + N+VP+PR+HF
Sbjct: 140 GQLNADLRKLAVNMVPFPRLHF 161
Score = 58.0 bits (134), Expect = 3e-10
Identities = 28/77 (36%), Positives = 42/77 (54%)
Frame = +2
Query: 20 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 199
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 200 LEFAIYPAPQVSTAVVE 250
+++ P+P+VS VVE
Sbjct: 61 NTYSVVPSPKVSDTVVE 77
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 90.6 bits (215), Expect = 4e-20
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
N+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L+ +S +T LRF
Sbjct: 80 NATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFP 139
Query: 436 GALNVDLTEFQTNLVPYPRIHF 501
G LN DL + N+VP+PR+HF
Sbjct: 140 GQLNADLRKLAVNMVPFPRLHF 161
Score = 58.0 bits (134), Expect = 3e-10
Identities = 28/77 (36%), Positives = 42/77 (54%)
Frame = +2
Query: 20 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 199
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 200 LEFAIYPAPQVSTAVVE 250
+++ P+P+VS VVE
Sbjct: 61 NTYSVVPSPKVSDTVVE 77
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 90.6 bits (215), Expect = 4e-20
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
N+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L+ +S +T LRF
Sbjct: 80 NATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFP 139
Query: 436 GALNVDLTEFQTNLVPYPRIHF 501
G LN DL + N+VP+PR+HF
Sbjct: 140 GQLNADLRKLAVNMVPFPRLHF 161
Score = 58.0 bits (134), Expect = 3e-10
Identities = 28/77 (36%), Positives = 42/77 (54%)
Frame = +2
Query: 20 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 199
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 200 LEFAIYPAPQVSTAVVE 250
+++ P+P+VS VVE
Sbjct: 61 NTYSVVPSPKVSDTVVE 77
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,958
Number of Sequences: 2352
Number of extensions: 19180
Number of successful extensions: 50
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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