Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30262
(751 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 183 1e-46
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 183 1e-46
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 183 1e-46
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 180 7e-46
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 180 7e-46
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 180 9e-46
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 180 9e-46
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 103 1e-22
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 103 1e-22
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 103 1e-22
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 103 1e-22
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 102 2e-22
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 102 2e-22
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 101 4e-22
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 101 5e-22
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 101 5e-22
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 69 3e-12
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 69 3e-12
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 32 0.35
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.5
At3g03950.2 68416.m00414 expressed protein contains Pfam profile... 29 4.4
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 183 bits (446), Expect = 1e-46
Identities = 86/139 (61%), Positives = 102/139 (73%), Gaps = 2/139 (1%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
NS+L+TH+ LEH+D ++DNEAIYDICRR+LDIERPTY+NLNRLI Q +SS+T SLRFD
Sbjct: 186 NSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFD 245
Query: 436 GALNVDLTEFQTNLVPYPRIHFPLARTRQSSLPRRPTMNSFPSPRSQTHAFEPANQMVKC 615
GA+NVD+TEFQTNLVPYPRIHF L+ + F P T FEP+N M KC
Sbjct: 246 GAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKC 305
Query: 616 DPRHGKYMG--LLYAVTVV 666
DPRHGKYM L+Y VV
Sbjct: 306 DPRHGKYMACCLMYRGDVV 324
Score = 122 bits (293), Expect = 3e-28
Identities = 56/83 (67%), Positives = 66/83 (79%)
Frame = +2
Query: 2 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 181
NN+ARGHYT+G+EIVD L+R+RKLAD CTGLQGFL+F+ LL+ERLSVD
Sbjct: 101 NNFARGHYTVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160
Query: 182 YGKKSKLEFAIYPAPQVSTAVVE 250
+GKKSKL F IYP+PQVSTAVVE
Sbjct: 161 FGKKSKLGFTIYPSPQVSTAVVE 183
Score = 94.7 bits (225), Expect = 6e-20
Identities = 53/95 (55%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Frame = +3
Query: 483 LPPYP---LPTGTYAPVISAEKAYHEQLSVAEITNACFRARQPDGEMRPPSWQVHG-LAV 650
L PYP +YAPVIS+ KAYHEQ SV EIT + F + P HG
Sbjct: 259 LVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDPR----HGKYMA 314
Query: 651 CC--NRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 749
CC RGDVVPKDVN A+A IK KRTIQFVDWCPT
Sbjct: 315 CCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPT 349
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 183 bits (445), Expect = 1e-46
Identities = 87/139 (62%), Positives = 102/139 (73%), Gaps = 2/139 (1%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
NS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFD
Sbjct: 186 NSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFD 245
Query: 436 GALNVDLTEFQTNLVPYPRIHFPLARTRQSSLPRRPTMNSFPSPRSQTHAFEPANQMVKC 615
GA+NVD+TEFQTNLVPYPRIHF L+ + P FEPA+ M KC
Sbjct: 246 GAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKC 305
Query: 616 DPRHGKYMG--LLYAVTVV 666
DPRHGKYM L+Y VV
Sbjct: 306 DPRHGKYMACCLMYRGDVV 324
Score = 128 bits (310), Expect = 3e-30
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2
Query: 2 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 181
NN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+ LL+ERLSVD
Sbjct: 101 NNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160
Query: 182 YGKKSKLEFAIYPAPQVSTAVVE 250
YGKKSKL F IYP+PQVSTAVVE
Sbjct: 161 YGKKSKLGFTIYPSPQVSTAVVE 183
Score = 104 bits (250), Expect = 5e-23
Identities = 58/95 (61%), Positives = 62/95 (65%), Gaps = 6/95 (6%)
Frame = +3
Query: 483 LPPYP---LPTGTYAPVISAEKAYHEQLSVAEITNACFRARQPDGEMRPPSWQVHG-LAV 650
L PYP +YAPVISA KAYHEQLSV EITNA F + P HG
Sbjct: 259 LVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPR----HGKYMA 314
Query: 651 CC--NRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 749
CC RGDVVPKDVNAA+ TIKTKRT+QFVDWCPT
Sbjct: 315 CCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPT 349
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 183 bits (445), Expect = 1e-46
Identities = 87/139 (62%), Positives = 102/139 (73%), Gaps = 2/139 (1%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
NS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFD
Sbjct: 186 NSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFD 245
Query: 436 GALNVDLTEFQTNLVPYPRIHFPLARTRQSSLPRRPTMNSFPSPRSQTHAFEPANQMVKC 615
GA+NVD+TEFQTNLVPYPRIHF L+ + P FEPA+ M KC
Sbjct: 246 GAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKC 305
Query: 616 DPRHGKYMG--LLYAVTVV 666
DPRHGKYM L+Y VV
Sbjct: 306 DPRHGKYMACCLMYRGDVV 324
Score = 128 bits (310), Expect = 3e-30
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2
Query: 2 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 181
NN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+ LL+ERLSVD
Sbjct: 101 NNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160
Query: 182 YGKKSKLEFAIYPAPQVSTAVVE 250
YGKKSKL F IYP+PQVSTAVVE
Sbjct: 161 YGKKSKLGFTIYPSPQVSTAVVE 183
Score = 104 bits (250), Expect = 5e-23
Identities = 58/95 (61%), Positives = 62/95 (65%), Gaps = 6/95 (6%)
Frame = +3
Query: 483 LPPYP---LPTGTYAPVISAEKAYHEQLSVAEITNACFRARQPDGEMRPPSWQVHG-LAV 650
L PYP +YAPVISA KAYHEQLSV EITNA F + P HG
Sbjct: 259 LVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPR----HGKYMA 314
Query: 651 CC--NRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 749
CC RGDVVPKDVNAA+ TIKTKRT+QFVDWCPT
Sbjct: 315 CCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPT 349
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 180 bits (439), Expect = 7e-46
Identities = 85/139 (61%), Positives = 103/139 (74%), Gaps = 2/139 (1%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
NS+L+TH+ LEH+D + ++DNEAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TASLRFD
Sbjct: 186 NSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFD 245
Query: 436 GALNVDLTEFQTNLVPYPRIHFPLARTRQSSLPRRPTMNSFPSPRSQTHAFEPANQMVKC 615
GALNVD+TEFQTNLVPYPRIHF L+ + AFEPA+ M KC
Sbjct: 246 GALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKC 305
Query: 616 DPRHGKYMG--LLYAVTVV 666
DPRHGKYM L+Y VV
Sbjct: 306 DPRHGKYMACCLMYRGDVV 324
Score = 128 bits (308), Expect = 5e-30
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2
Query: 2 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 181
NN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVD
Sbjct: 101 NNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160
Query: 182 YGKKSKLEFAIYPAPQVSTAVVE 250
YGKKSKL F +YP+PQVST+VVE
Sbjct: 161 YGKKSKLGFTVYPSPQVSTSVVE 183
Score = 107 bits (256), Expect = 1e-23
Identities = 59/95 (62%), Positives = 64/95 (67%), Gaps = 6/95 (6%)
Frame = +3
Query: 483 LPPYP---LPTGTYAPVISAEKAYHEQLSVAEITNACFRARQPDGEMRPPSWQVHG-LAV 650
L PYP +YAPVISAEKA+HEQLSVAEITN+ F + P HG
Sbjct: 259 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPR----HGKYMA 314
Query: 651 CC--NRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 749
CC RGDVVPKDVNAA+ TIKTKRTIQFVDWCPT
Sbjct: 315 CCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPT 349
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 180 bits (439), Expect = 7e-46
Identities = 85/139 (61%), Positives = 103/139 (74%), Gaps = 2/139 (1%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
NS+L+TH+ LEH+D + ++DNEAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TASLRFD
Sbjct: 186 NSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFD 245
Query: 436 GALNVDLTEFQTNLVPYPRIHFPLARTRQSSLPRRPTMNSFPSPRSQTHAFEPANQMVKC 615
GALNVD+TEFQTNLVPYPRIHF L+ + AFEPA+ M KC
Sbjct: 246 GALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKC 305
Query: 616 DPRHGKYMG--LLYAVTVV 666
DPRHGKYM L+Y VV
Sbjct: 306 DPRHGKYMACCLMYRGDVV 324
Score = 128 bits (308), Expect = 5e-30
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2
Query: 2 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 181
NN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVD
Sbjct: 101 NNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160
Query: 182 YGKKSKLEFAIYPAPQVSTAVVE 250
YGKKSKL F +YP+PQVST+VVE
Sbjct: 161 YGKKSKLGFTVYPSPQVSTSVVE 183
Score = 107 bits (256), Expect = 1e-23
Identities = 59/95 (62%), Positives = 64/95 (67%), Gaps = 6/95 (6%)
Frame = +3
Query: 483 LPPYP---LPTGTYAPVISAEKAYHEQLSVAEITNACFRARQPDGEMRPPSWQVHG-LAV 650
L PYP +YAPVISAEKA+HEQLSVAEITN+ F + P HG
Sbjct: 259 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPR----HGKYMA 314
Query: 651 CC--NRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 749
CC RGDVVPKDVNAA+ TIKTKRTIQFVDWCPT
Sbjct: 315 CCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPT 349
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 180 bits (438), Expect = 9e-46
Identities = 85/139 (61%), Positives = 102/139 (73%), Gaps = 2/139 (1%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
NS+L+TH+ LEH+D + ++DNEAIYDICRR+L IERPTYTNLNRL+ Q++SS+TASLRFD
Sbjct: 186 NSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFD 245
Query: 436 GALNVDLTEFQTNLVPYPRIHFPLARTRQSSLPRRPTMNSFPSPRSQTHAFEPANQMVKC 615
GALNVD+TEFQTNLVPYPRIHF L+ + AFEPA+ M KC
Sbjct: 246 GALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKC 305
Query: 616 DPRHGKYMG--LLYAVTVV 666
DPRHGKYM L+Y VV
Sbjct: 306 DPRHGKYMACCLMYRGDVV 324
Score = 128 bits (308), Expect = 5e-30
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2
Query: 2 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 181
NN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVD
Sbjct: 101 NNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160
Query: 182 YGKKSKLEFAIYPAPQVSTAVVE 250
YGKKSKL F +YP+PQVST+VVE
Sbjct: 161 YGKKSKLGFTVYPSPQVSTSVVE 183
Score = 107 bits (256), Expect = 1e-23
Identities = 59/95 (62%), Positives = 64/95 (67%), Gaps = 6/95 (6%)
Frame = +3
Query: 483 LPPYP---LPTGTYAPVISAEKAYHEQLSVAEITNACFRARQPDGEMRPPSWQVHG-LAV 650
L PYP +YAPVISAEKA+HEQLSVAEITN+ F + P HG
Sbjct: 259 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPR----HGKYMA 314
Query: 651 CC--NRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 749
CC RGDVVPKDVNAA+ TIKTKRTIQFVDWCPT
Sbjct: 315 CCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPT 349
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 180 bits (438), Expect = 9e-46
Identities = 85/139 (61%), Positives = 102/139 (73%), Gaps = 2/139 (1%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
NS+L+TH+ LEH+D + ++DNEAIYDICRR+L IERPTYTNLNRL+ Q++SS+TASLRFD
Sbjct: 186 NSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFD 245
Query: 436 GALNVDLTEFQTNLVPYPRIHFPLARTRQSSLPRRPTMNSFPSPRSQTHAFEPANQMVKC 615
GALNVD+TEFQTNLVPYPRIHF L+ + AFEPA+ M KC
Sbjct: 246 GALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKC 305
Query: 616 DPRHGKYMG--LLYAVTVV 666
DPRHGKYM L+Y VV
Sbjct: 306 DPRHGKYMACCLMYRGDVV 324
Score = 128 bits (308), Expect = 5e-30
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2
Query: 2 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 181
NN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVD
Sbjct: 101 NNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160
Query: 182 YGKKSKLEFAIYPAPQVSTAVVE 250
YGKKSKL F +YP+PQVST+VVE
Sbjct: 161 YGKKSKLGFTVYPSPQVSTSVVE 183
Score = 107 bits (256), Expect = 1e-23
Identities = 59/95 (62%), Positives = 64/95 (67%), Gaps = 6/95 (6%)
Frame = +3
Query: 483 LPPYP---LPTGTYAPVISAEKAYHEQLSVAEITNACFRARQPDGEMRPPSWQVHG-LAV 650
L PYP +YAPVISAEKA+HEQLSVAEITN+ F + P HG
Sbjct: 259 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPR----HGKYMA 314
Query: 651 CC--NRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 749
CC RGDVVPKDVNAA+ TIKTKRTIQFVDWCPT
Sbjct: 315 CCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPT 349
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 103 bits (248), Expect = 1e-22
Identities = 47/128 (36%), Positives = 72/128 (56%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
N+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN LI +S +T LRF
Sbjct: 184 NATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFP 243
Query: 436 GALNVDLTEFQTNLVPYPRIHFPLARTRQSSLPRRPTMNSFPSPRSQTHAFEPANQMVKC 615
G LN DL + NL+P+PR+HF + + ++ P ++ N M
Sbjct: 244 GQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAA 303
Query: 616 DPRHGKYM 639
DPRHG+Y+
Sbjct: 304 DPRHGRYL 311
Score = 70.9 bits (166), Expect = 8e-13
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +2
Query: 2 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 181
NN+A+GHYT G E++D VLD +RK A+ LQGF + H LL+ ++ +
Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 182 YGKKSKLEFAIYPAPQVSTAVVE 250
Y + + F+++P+P+VS VVE
Sbjct: 159 YPDRMMMTFSVFPSPKVSDTVVE 181
Score = 32.3 bits (70), Expect = 0.35
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +3
Query: 513 YAPVISAEKAYHEQLSVAEITNACFRARQPDGEMRPPSWQVHGLAVCCNRGDVVPKDVNA 692
+AP+ S + LSV E+T + A+ P + + A RG + K+V+
Sbjct: 270 FAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGR-YLTASAVFRGKLSTKEVDE 328
Query: 693 AIATIKTKRTIQFVDWCP 746
+ I+ K + FV+W P
Sbjct: 329 QMMNIQNKNSSYFVEWIP 346
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 103 bits (248), Expect = 1e-22
Identities = 47/128 (36%), Positives = 72/128 (56%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
N+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN LI +S +T LRF
Sbjct: 184 NATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFP 243
Query: 436 GALNVDLTEFQTNLVPYPRIHFPLARTRQSSLPRRPTMNSFPSPRSQTHAFEPANQMVKC 615
G LN DL + NL+P+PR+HF + + ++ P ++ N M
Sbjct: 244 GQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAA 303
Query: 616 DPRHGKYM 639
DPRHG+Y+
Sbjct: 304 DPRHGRYL 311
Score = 74.9 bits (176), Expect = 5e-14
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +2
Query: 2 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 181
NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++ +
Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 182 YGKKSKLEFAIYPAPQVSTAVVE 250
Y + + F+++P+P+VS VVE
Sbjct: 159 YPDRMMMTFSVFPSPKVSDTVVE 181
Score = 31.9 bits (69), Expect = 0.47
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +3
Query: 513 YAPVISAEKAYHEQLSVAEITNACFRARQPDGEMRPPSWQVHGLAVCCNRGDVVPKDVNA 692
+AP+ S + LSV E+T + A+ P + + A RG + K+V+
Sbjct: 270 FAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGR-YLTASAVFRGKMSTKEVDE 328
Query: 693 AIATIKTKRTIQFVDWCP 746
+ ++ K + FV+W P
Sbjct: 329 QMMNVQNKNSSYFVEWIP 346
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 103 bits (248), Expect = 1e-22
Identities = 48/128 (37%), Positives = 72/128 (56%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
N+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T SLRF
Sbjct: 185 NATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFP 244
Query: 436 GALNVDLTEFQTNLVPYPRIHFPLARTRQSSLPRRPTMNSFPSPRSQTHAFEPANQMVKC 615
G LN DL + NL+P+PR+HF + + S P ++ N M
Sbjct: 245 GQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAA 304
Query: 616 DPRHGKYM 639
DPRHG+Y+
Sbjct: 305 DPRHGRYL 312
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = +2
Query: 2 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 181
NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++ +
Sbjct: 100 NNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 159
Query: 182 YGKKSKLEFAIYPAPQVSTAVVE 250
Y + L F+++P+P+VS VVE
Sbjct: 160 YPDRMMLTFSVFPSPKVSDTVVE 182
Score = 31.1 bits (67), Expect = 0.82
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +3
Query: 513 YAPVISAEKAYHEQLSVAEITNACFRARQPDGEMRPPSWQVHGLAVCCNRGDVVPKDVNA 692
+AP+ S + L+V E+T + A+ P + + A RG + K+V+
Sbjct: 271 FAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGR-YLTASAMFRGKMSTKEVDE 329
Query: 693 AIATIKTKRTIQFVDWCP 746
I ++ K + FV+W P
Sbjct: 330 QILNVQNKNSSYFVEWIP 347
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 103 bits (248), Expect = 1e-22
Identities = 48/128 (37%), Positives = 72/128 (56%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
N+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T SLRF
Sbjct: 185 NATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFP 244
Query: 436 GALNVDLTEFQTNLVPYPRIHFPLARTRQSSLPRRPTMNSFPSPRSQTHAFEPANQMVKC 615
G LN DL + NL+P+PR+HF + + S P ++ N M
Sbjct: 245 GQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAA 304
Query: 616 DPRHGKYM 639
DPRHG+Y+
Sbjct: 305 DPRHGRYL 312
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = +2
Query: 2 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 181
NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++ +
Sbjct: 100 NNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 159
Query: 182 YGKKSKLEFAIYPAPQVSTAVVE 250
Y + L F+++P+P+VS VVE
Sbjct: 160 YPDRMMLTFSVFPSPKVSDTVVE 182
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +3
Query: 513 YAPVISAEKAYHEQLSVAEITNACFRARQPDGEMRPPSWQVHGLAVCCNRGDVVPKDVNA 692
+AP+ S + L+V E+T + ++ P + + A RG + K+V+
Sbjct: 271 FAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGR-YLTASAIFRGQMSTKEVDE 329
Query: 693 AIATIKTKRTIQFVDWCP 746
I I+ K + FV+W P
Sbjct: 330 QILNIQNKNSSYFVEWIP 347
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 102 bits (245), Expect = 2e-22
Identities = 47/128 (36%), Positives = 71/128 (55%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
N+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF
Sbjct: 184 NATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 243
Query: 436 GALNVDLTEFQTNLVPYPRIHFPLARTRQSSLPRRPTMNSFPSPRSQTHAFEPANQMVKC 615
G LN DL + NL+P+PR+HF + + S P ++ N M
Sbjct: 244 GQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAA 303
Query: 616 DPRHGKYM 639
DPRHG+Y+
Sbjct: 304 DPRHGRYL 311
Score = 75.8 bits (178), Expect = 3e-14
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = +2
Query: 2 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 181
NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++ +
Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 182 YGKKSKLEFAIYPAPQVSTAVVE 250
Y + L F+++P+P+VS VVE
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVE 181
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +3
Query: 513 YAPVISAEKAYHEQLSVAEITNACFRARQPDGEMRPPSWQVHGLAVCCNRGDVVPKDVNA 692
+AP+ S + L+V E+T + ++ P + + A RG + K+V+
Sbjct: 270 FAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGR-YLTASAMFRGKMSTKEVDE 328
Query: 693 AIATIKTKRTIQFVDWCP 746
+ ++ K + FV+W P
Sbjct: 329 QMLNVQNKNSSYFVEWIP 346
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 102 bits (245), Expect = 2e-22
Identities = 47/128 (36%), Positives = 71/128 (55%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
N+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF
Sbjct: 184 NATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 243
Query: 436 GALNVDLTEFQTNLVPYPRIHFPLARTRQSSLPRRPTMNSFPSPRSQTHAFEPANQMVKC 615
G LN DL + NL+P+PR+HF + + S P ++ N M
Sbjct: 244 GQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAA 303
Query: 616 DPRHGKYM 639
DPRHG+Y+
Sbjct: 304 DPRHGRYL 311
Score = 75.8 bits (178), Expect = 3e-14
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = +2
Query: 2 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 181
NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++ +
Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 182 YGKKSKLEFAIYPAPQVSTAVVE 250
Y + L F+++P+P+VS VVE
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVE 181
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +3
Query: 513 YAPVISAEKAYHEQLSVAEITNACFRARQPDGEMRPPSWQVHGLAVCCNRGDVVPKDVNA 692
+AP+ S + L+V E+T + ++ P + + A RG + K+V+
Sbjct: 270 FAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGR-YLTASAMFRGKMSTKEVDE 328
Query: 693 AIATIKTKRTIQFVDWCP 746
+ ++ K + FV+W P
Sbjct: 329 QMLNVQNKNSSYFVEWIP 346
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 101 bits (243), Expect = 4e-22
Identities = 46/128 (35%), Positives = 71/128 (55%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
N+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF
Sbjct: 184 NATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFP 243
Query: 436 GALNVDLTEFQTNLVPYPRIHFPLARTRQSSLPRRPTMNSFPSPRSQTHAFEPANQMVKC 615
G LN DL + NL+P+PR+HF + + + P ++ N M
Sbjct: 244 GQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAA 303
Query: 616 DPRHGKYM 639
DPRHG+Y+
Sbjct: 304 DPRHGRYL 311
Score = 74.9 bits (176), Expect = 5e-14
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +2
Query: 2 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 181
NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++ +
Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 182 YGKKSKLEFAIYPAPQVSTAVVE 250
Y + + F+++P+P+VS VVE
Sbjct: 159 YPDRMMMTFSVFPSPKVSDTVVE 181
Score = 31.1 bits (67), Expect = 0.82
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = +3
Query: 513 YAPVISAEKAYHEQLSVAEITNACFRARQPDGEMRPPSWQVHGLAVCCNRGDVVPKDVNA 692
+AP+ S + L+V E+T + A+ P + + A RG + K+V+
Sbjct: 270 FAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADPRHGR-YLTASAMFRGKMSTKEVDE 328
Query: 693 AIATIKTKRTIQFVDWCP 746
+ ++ K + FV+W P
Sbjct: 329 QMLNVQNKNSSYFVEWIP 346
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 101 bits (242), Expect = 5e-22
Identities = 46/128 (35%), Positives = 71/128 (55%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
N+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF
Sbjct: 184 NATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 243
Query: 436 GALNVDLTEFQTNLVPYPRIHFPLARTRQSSLPRRPTMNSFPSPRSQTHAFEPANQMVKC 615
G LN DL + NL+P+PR+HF + + + P ++ N M
Sbjct: 244 GQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAA 303
Query: 616 DPRHGKYM 639
DPRHG+Y+
Sbjct: 304 DPRHGRYL 311
Score = 75.8 bits (178), Expect = 3e-14
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = +2
Query: 2 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 181
NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++ +
Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 182 YGKKSKLEFAIYPAPQVSTAVVE 250
Y + L F+++P+P+VS VVE
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVE 181
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = +3
Query: 513 YAPVISAEKAYHEQLSVAEITNACFRARQPDGEMRPPSWQVHGLAVCCNRGDVVPKDVNA 692
+AP+ S + L+V E+T + A+ P + + A RG + K+V+
Sbjct: 270 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGR-YLTASAMFRGKMSTKEVDE 328
Query: 693 AIATIKTKRTIQFVDWCP 746
+ ++ K + FV+W P
Sbjct: 329 QMINVQNKNSSYFVEWIP 346
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 101 bits (242), Expect = 5e-22
Identities = 46/128 (35%), Positives = 71/128 (55%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
N+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF
Sbjct: 184 NATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 243
Query: 436 GALNVDLTEFQTNLVPYPRIHFPLARTRQSSLPRRPTMNSFPSPRSQTHAFEPANQMVKC 615
G LN DL + NL+P+PR+HF + + + P ++ N M
Sbjct: 244 GQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAA 303
Query: 616 DPRHGKYM 639
DPRHG+Y+
Sbjct: 304 DPRHGRYL 311
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = +2
Query: 2 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 181
NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++ +
Sbjct: 99 NNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 182 YGKKSKLEFAIYPAPQVSTAVVE 250
Y + L F+++P+P+VS VVE
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVE 181
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +3
Query: 513 YAPVISAEKAYHEQLSVAEITNACFRARQPDGEMRPPSWQVHGLAVCCNRGDVVPKDVNA 692
+AP+ S + L+V E+T + ++ P + + A RG + K+V+
Sbjct: 270 FAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGR-YLTASAMFRGKMSTKEVDE 328
Query: 693 AIATIKTKRTIQFVDWCP 746
+ ++ K + FV+W P
Sbjct: 329 QMINVQNKNSSYFVEWIP 346
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 69.3 bits (162), Expect = 3e-12
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 6/137 (4%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
NS+LT ++DC ++DN A+ I L + PT+ N L+ ++S+ T +LR+
Sbjct: 187 NSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYP 246
Query: 436 GALNVDLTEFQTNLVPYPRIHF------PLARTRQSSLPRRPTMNSFPSPRSQTHAFEPA 597
G +N DL +L+P PR HF PL RQ+++ R+ T+ QT +
Sbjct: 247 GYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVS 306
Query: 598 NQMVKCDPRHGKYMGLL 648
+ + KY+ +L
Sbjct: 307 SYARNKEASQAKYISIL 323
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/82 (28%), Positives = 42/82 (51%)
Frame = +2
Query: 2 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 181
NN+A G++ GK + + ++D I + AD L+GF++ H L+E L+
Sbjct: 102 NNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDR 160
Query: 182 YGKKSKLEFAIYPAPQVSTAVV 247
Y KK ++++P ++ VV
Sbjct: 161 YSKKLVQTYSVFPNQMETSDVV 182
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 660 RGDVVPKDVNAAIATIKTKRTIQFVDWCP 746
+G+V P V+ ++ I+ ++ + F+DW P
Sbjct: 327 QGEVDPTQVHESLQRIRERKLVNFIDWGP 355
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 68.9 bits (161), Expect = 3e-12
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 6/137 (4%)
Frame = +1
Query: 256 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 435
NS+LT ++DC ++DN A+ I L + PT+ N L+ ++S+ T +LR+
Sbjct: 187 NSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYP 246
Query: 436 GALNVDLTEFQTNLVPYPRIHF------PLARTRQSSLPRRPTMNSFPSPRSQTHAFEPA 597
G +N DL +L+P PR HF PL RQ+++ R+ T+ QT +
Sbjct: 247 GYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVS 306
Query: 598 NQMVKCDPRHGKYMGLL 648
+ + KY+ +L
Sbjct: 307 SYARNKEASQAKYISIL 323
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/82 (28%), Positives = 42/82 (51%)
Frame = +2
Query: 2 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 181
NN+A G++ GK + + ++D I + AD L+GF++ H L+E L+
Sbjct: 102 NNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDR 160
Query: 182 YGKKSKLEFAIYPAPQVSTAVV 247
Y KK ++++P ++ VV
Sbjct: 161 YSKKLVQTYSVFPNQMETSDVV 182
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/45 (42%), Positives = 21/45 (46%)
Frame = +3
Query: 408 LDHCFFEIRRRSECGPHRVPD*LGALPPYPLPTGTYAPVISAEKA 542
L C RRR GP RV + LPPYP P T A V + A
Sbjct: 97 LQRCIIARRRRDRVGPVRVEN---TLPPYPPPPMTSAAVTTTTLA 138
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 139 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 41
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At3g03950.2 68416.m00414 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 424
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +1
Query: 382 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLARTRQSSLPRRPTMNS 555
+RL+ TA L D +L D E N +P H P + S RRP MN+
Sbjct: 8 DRLVTSFPLLDTADLFQDLSLGSDANEVPMNFTKHPYGHAPYGASSHGS-ERRPNMNA 64
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,434,353
Number of Sequences: 28952
Number of extensions: 379216
Number of successful extensions: 1210
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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