Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30261
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    24   1.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    24   1.1  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   1.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   1.4  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   3.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.7  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 288 DQKIPRLFRNIYVVCSI 238
           D KIP++  N+Y++C +
Sbjct: 220 DDKIPQISDNLYILCRL 236


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 288 DQKIPRLFRNIYVVCSI 238
           D KIP++  N+Y++C +
Sbjct: 220 DDKIPQISDNLYILCRL 236


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +1

Query: 109 QKLQLWEDVIVCYTILQLRHKAAEVIQQQ-IDT 204
           Q   L+ DVIV  T LQL  +  EVI +Q +DT
Sbjct: 218 QLYYLYFDVIVISTFLQLFLEHYEVINRQTLDT 250


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +1

Query: 109 QKLQLWEDVIVCYTILQLRHKAAEVIQQQ-IDT 204
           Q   L+ DVIV  T LQL  +  EVI +Q +DT
Sbjct: 144 QLYYLYFDVIVISTFLQLFLEHYEVINRQTLDT 176


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 509 WNNLAKVYVKQGDKYRAYRA 568
           WN L + Y K+G+  + Y A
Sbjct: 101 WNELEEKYDKEGEYRKKYEA 120


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 699 NSVNPKVCDSRE*RPSKCRV 640
           +SV+P+V DS   RP  C V
Sbjct: 120 SSVSPEVKDSSRDRPFTCEV 139


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 18  ERSPRVMDVAPAAGRPVPEPGAREGSTRGV 107
           +RSP V D++   G  VPE  +  GS+  V
Sbjct: 701 QRSPSVTDLSTKDGTTVPE--SNNGSSPSV 728


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 393 IQESVWLRLGY 425
           +QE+ WL+LGY
Sbjct: 900 LQENDWLQLGY 910


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,160
Number of Sequences: 336
Number of extensions: 3901
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)