Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30261
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    28   0.34 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.2  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    24   5.5  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    23   7.3  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 27.9 bits (59), Expect = 0.34
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -2

Query: 91  PSRAPGSGTGRPAAGATSMTRGDRSPR 11
           P+ APG G GRP A      RG   P+
Sbjct: 399 PAGAPGGGEGRPGAPGPKGPRGYEGPQ 425


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 18   ERSPRVMDVAPAAGRPVPEPGAREGSTRGVSET 116
            E+ P+V+  AP   +P+P P     S+ GV  T
Sbjct: 926  EQPPQVVAAAPTQQQPLP-PAPAAASSAGVQPT 957


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 255 YVVCSIAQQTVQLDCRICVNLLLYNFCC 172
           + VCS+ + TVQ+ C  C  L    F C
Sbjct: 316 WCVCSLREATVQVKCFKCWKLGHKGFEC 343


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -3

Query: 348 HTSCD-RTENFPSGAVLGYFYDQKIPRLFRNI 256
           H+ C  R + +P    +GY +D++IP   R +
Sbjct: 629 HSFCGIRDQLYPDKRHMGYPFDRRIPTATRTL 660


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 800,491
Number of Sequences: 2352
Number of extensions: 17054
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)