Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30261
(728 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10401-9|AAA19054.4| 771|Caenorhabditis elegans Hypothetical pr... 75 7e-14
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 38 0.006
U58757-5|AAC47919.3| 555|Caenorhabditis elegans Hypothetical pr... 32 0.48
U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of hsp70... 31 1.1
AF303269-1|AAG50227.1| 266|Caenorhabditis elegans Hsp70-interac... 31 1.1
U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain (pr... 29 2.6
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical ... 29 3.4
Z66522-6|CAH04737.1| 1147|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical pr... 28 5.9
U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small glutamine... 28 5.9
>U10401-9|AAA19054.4| 771|Caenorhabditis elegans Hypothetical
protein T20B12.1 protein.
Length = 771
Score = 74.5 bits (175), Expect = 7e-14
Identities = 37/101 (36%), Positives = 54/101 (53%)
Frame = +3
Query: 207 SDSQAVLFAGRCYRRHKCYEKAWEFSDHKSSRAQRHWGNFLFDHKKYEECIPHYEKSVEI 386
+DS ++ G R + + KA E SD +++RA R G+ L KK+EE H +S+E+
Sbjct: 421 NDSMLHVYLGDITRNLEYFTKAIELSDDRNARAHRSLGHLLLMDKKFEEAYKHLRRSLEL 480
Query: 387 NSIQESVWLRLGYAALTTENWELSARAYRRYTYLNPNSFEA 509
IQ W GY A EN++ S + Y R L P+ FEA
Sbjct: 481 QPIQLGTWFNAGYCAWKLENFKESTQCYHRCVSLQPDHFEA 521
Score = 56.4 bits (130), Expect = 2e-08
Identities = 21/55 (38%), Positives = 37/55 (67%)
Frame = +2
Query: 488 QP*LVRGWNNLAKVYVKQGDKYRAYRALMEALRFNYDNWKLWDNVIIVSMDTLHF 652
QP WNNL+ Y++ G K +A++ L EAL++NY++ +W+N +++S+D F
Sbjct: 515 QPDHFEAWNNLSAAYIRHGQKPKAWKLLQEALKYNYEHPNVWENYMLLSVDVGEF 569
Score = 55.2 bits (127), Expect = 5e-08
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Frame = +1
Query: 4 SYLWASGLPASWTWRQQLADLYQSLGLVKAALEEYQKLQLWEDVIVCYTILQLRHKAAEV 183
SY+ ASGL W LA + SLG AL +KL++W+ VI CY L KA +
Sbjct: 352 SYILASGLTPFWQSSVLLAGILNSLGCTSEALLILEKLEMWDGVIDCYKQLGQMDKAETL 411
Query: 184 IQQQIDTNPT-VKLYCLLGDATDDINVTKKPGNFLIIKVAE-HSATGEIFCSITRSMKNA 357
I++ I+ P L+ LGD T ++ K + A H + G + + + + A
Sbjct: 412 IRRLIEQKPNDSMLHVYLGDITRNLEYFTKAIELSDDRNARAHRSLGHLLL-MDKKFEEA 470
Query: 358 YRITKSRSKLIP 393
Y+ + +L P
Sbjct: 471 YKHLRRSLELQP 482
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 38.3 bits (85), Expect = 0.006
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 258 CYEKAWEFSDHKSSRAQRHWGNFLFDHKKYEECIPHYEKSVEIN 389
C+E + D ++ + GN LF +++Y + + HY K++E+N
Sbjct: 11 CFEFIYSLDDKTEAQREYEAGNALFVNRQYSDALTHYHKAIELN 54
>U58757-5|AAC47919.3| 555|Caenorhabditis elegans Hypothetical
protein C01B10.9 protein.
Length = 555
Score = 31.9 bits (69), Expect = 0.48
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +3
Query: 318 GNFLFDH--KKYEECIPHYEKSVEINSIQESVWLRLGYAALTTENWELSARAYRRY 479
GN+ FD KK + K +N+ QES W LT E WE S R+ Y
Sbjct: 88 GNYFFDADTKKAFDYFNSTGKEGVVNASQESFWYNSDPIWLTNERWESSRRSAAFY 143
>U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of
hsp70-interacting protein(chip family) protein 1
protein.
Length = 266
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 294 SSRAQRHW--GNFLFDHKKYEECIPHYEKSVEINSIQESVWLRLGYAALTTENWELSARA 467
SS A++H G + +K+Y++ + HY K++++N + + + N +++
Sbjct: 2 SSGAEQHNTNGKKCYMNKRYDDAVDHYSKAIKVNPLPK-YYQNRAMCYFQLNNLKMTEED 60
Query: 468 YRRYTYLNPN 497
+R L+PN
Sbjct: 61 CKRALELSPN 70
>AF303269-1|AAG50227.1| 266|Caenorhabditis elegans
Hsp70-interacting protein protein.
Length = 266
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 294 SSRAQRHW--GNFLFDHKKYEECIPHYEKSVEINSIQESVWLRLGYAALTTENWELSARA 467
SS A++H G + +K+Y++ + HY K++++N + + + N +++
Sbjct: 2 SSGAEQHNTNGKKCYMNKRYDDAVDHYSKAIKVNPLPK-YYQNRAMCYFQLNNLKMTEED 60
Query: 468 YRRYTYLNPN 497
+R L+PN
Sbjct: 61 CKRALELSPN 70
>U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 9 protein.
Length = 591
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -3
Query: 261 NIYVVCSIAQQTVQLDCRICVNLLLYNFCCLMPQLEYSVTNYNIFPKL 118
N+ S++ ++V L CR N+ + PQL+Y++ + I P +
Sbjct: 211 NLENTISLSAESVSLTCRAARNVFTRAAVIVQPQLQYNMLHEAIIPSI 258
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1
Query: 247 DDINVTKKPGNFLIIKVAEHSATGEIFCSITRSMKNAYRITK 372
++I+V K G FL I +A H+ + F SITRS+ YR+ K
Sbjct: 45 NEIDV-KNIGEFLEIHMA-HTTKDDKFGSITRSITRCYRLPK 84
>AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical
protein R09E12.3 protein.
Length = 320
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 246 RRHKCYEKAWEFSDHKSSRAQRHWGNFLFDHKKYEECIPHYEKSVEI 386
+ H Y+KA E D + + F+ KK+ EC+ EK+VE+
Sbjct: 23 KAHVHYDKAIEL-DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEV 68
>Z66522-6|CAH04737.1| 1147|Caenorhabditis elegans Hypothetical
protein F14E5.2b protein.
Length = 1147
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 539 VSRRLWRDCSSLERVRVEVGVSTVRSRRQLPVLCRK 432
+ R L R+C ++ + R++ VR R QL CRK
Sbjct: 862 IVRLLQRECKAIVKERMQESARDVRLRPQLLTSCRK 897
>Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical
protein F14E5.2a protein.
Length = 1149
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 539 VSRRLWRDCSSLERVRVEVGVSTVRSRRQLPVLCRK 432
+ R L R+C ++ + R++ VR R QL CRK
Sbjct: 864 IVRLLQRECKAIVKERMQESARDVRLRPQLLTSCRK 899
>U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small
glutamine-rich tetratricorepeat protein protein 1
protein.
Length = 337
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 339 KKYEECIPHYEKSVEINSIQESVWLRLGYAALTTENWELSARAYRRYTYLNPN 497
++Y+ I ++ ++ W R+G A +E +A AY++ L PN
Sbjct: 152 EQYDLAIQDCRTALALDPSYSKAWGRMGLAYSCQNRYEHAAEAYKKALELEPN 204
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,320,488
Number of Sequences: 27780
Number of extensions: 377053
Number of successful extensions: 1330
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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