Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30260
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...    96   1e-21
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           25   3.3  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           25   3.3  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           24   5.9  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           24   5.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.7  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score = 95.9 bits (228), Expect = 1e-21
 Identities = 46/56 (82%), Positives = 50/56 (89%)
 Frame = +3

Query: 96  NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERMYL 263
           +AVITVPAYFNDSQRQATKDAG I+GLNV+RIINEPTAAA+AYGLDK   GER  L
Sbjct: 1   DAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVL 56



 Score = 46.0 bits (104), Expect = 1e-06
 Identities = 20/22 (90%), Positives = 22/22 (100%)
 Frame = +2

Query: 254 NVLIFDLGGGTFDVSILTIEDG 319
           NVLIFDLGGGTFDVSILTI++G
Sbjct: 54  NVLIFDLGGGTFDVSILTIDEG 75


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = -3

Query: 354 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIST 256
           W+ P    T+ +P++         PPP +  +T
Sbjct: 221 WIDPTATTTTHVPTTTTTWSDLPPPPPTTTTTT 253


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = -3

Query: 354 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIST 256
           W+ P    T+ +P++         PPP +  +T
Sbjct: 222 WIDPTATTTTHVPTTTTTWSDLPPPPPTTTTTT 254


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = -3

Query: 354 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIST 256
           W+ P    T+  P++         PPP +  +T
Sbjct: 222 WIDPTATTTTHAPTTTTTWSDQPPPPPTTTTTT 254


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = -3

Query: 354 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIST 256
           W+ P    T+ +P +         PPP +  +T
Sbjct: 222 WIDPTATTTTHVPPTTTTWSDLPPPPPTTTTTT 254


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 712  HLGDTSGATPPVQYRGFEPY 653
            H  D+SG+T   QYR  E +
Sbjct: 1534 HTDDSSGSTSAKQYRDLETF 1553


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 846,612
Number of Sequences: 2352
Number of extensions: 18767
Number of successful extensions: 60
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)