Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30259
         (787 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...   230   1e-62
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...   229   3e-62
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...   177   1e-46
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    26   0.39 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.8  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   4.8  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.8  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   8.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.4  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score =  230 bits (562), Expect = 1e-62
 Identities = 95/113 (84%), Positives = 104/113 (92%)
 Frame = +2

Query: 254 TCDWKGKVNNCDKLEKPRKVLPILKTDEPICPEGKLACGSGDCIEKELFCNGKPDCKDES 433
           TCDWKGKVNNCDKLEKPRKVLP  KTDEPICP+GKL+CG+G+CI+KELFCNGKPDCKDES
Sbjct: 79  TCDWKGKVNNCDKLEKPRKVLPNFKTDEPICPDGKLSCGNGECIDKELFCNGKPDCKDES 138

Query: 434 DENACTVELDPNRAPDCDPNQCVLXDCFCSADGTRIPGGIEPNQVPQMVTITF 592
           DEN+CTVE DPNRA DCDP QCVL DCFCSADGTRIPG +EP  VPQM+T+TF
Sbjct: 139 DENSCTVETDPNRALDCDPTQCVLPDCFCSADGTRIPGQLEPANVPQMITLTF 191



 Score = 52.0 bits (119), Expect = 5e-09
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = +1

Query: 76  QDDDGAGDEPNADQLCDGRPADEYFRLTTEG 168
           Q+++G GDE  AD+LC+ RPADEYFRLTTEG
Sbjct: 20  QEEEG-GDEATADELCENRPADEYFRLTTEG 49



 Score = 44.4 bits (100), Expect = 1e-06
 Identities = 29/59 (49%), Positives = 35/59 (59%)
 Frame = +1

Query: 607 NVDNIDLYEPNISTVIVIILTGCQI*RNVFRLHTKFPNYAAVQELHRQRXMKFXNFSIT 783
           NVDNIDLYE  I         GCQI R  F +  K+ NY+AVQ+LHR R  +   FS+T
Sbjct: 196 NVDNIDLYE-EIFNGNRANPNGCQI-RGTFFVSHKYTNYSAVQDLHR-RGHEIAVFSLT 251



 Score = 43.2 bits (97), Expect = 2e-06
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = +3

Query: 198 SGLKQITCPSGLAFDLDKQ 254
           SGLKQITCPSGLAFD+DKQ
Sbjct: 60  SGLKQITCPSGLAFDIDKQ 78


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score =  229 bits (559), Expect = 3e-62
 Identities = 96/124 (77%), Positives = 107/124 (86%)
 Frame = +2

Query: 221 PVWIGFRS**TTCDWKGKVNNCDKLEKPRKVLPILKTDEPICPEGKLACGSGDCIEKELF 400
           PV + F     TCDWK KVNNCD +EKPRKVLP  KTDEPICP+GKL+CG+G+CI+KELF
Sbjct: 75  PVGLAFDIERQTCDWKTKVNNCDVIEKPRKVLPNFKTDEPICPDGKLSCGNGECIDKELF 134

Query: 401 CNGKPDCKDESDENACTVELDPNRAPDCDPNQCVLXDCFCSADGTRIPGGIEPNQVPQMV 580
           CNGKPDCKDESDEN+CTVE DPNRAPDCDP QCVL DCFCSADGTRIPG +EP  VPQM+
Sbjct: 135 CNGKPDCKDESDENSCTVETDPNRAPDCDPTQCVLPDCFCSADGTRIPGQLEPANVPQMI 194

Query: 581 TITF 592
           T+TF
Sbjct: 195 TLTF 198



 Score = 52.0 bits (119), Expect = 5e-09
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = +1

Query: 76  QDDDGAGDEPNADQLCDGRPADEYFRLTTEG 168
           Q+++G GDE  AD+LC+ RPADEYFRLTTEG
Sbjct: 20  QEEEG-GDEATADELCENRPADEYFRLTTEG 49



 Score = 44.0 bits (99), Expect = 1e-06
 Identities = 28/59 (47%), Positives = 35/59 (59%)
 Frame = +1

Query: 607 NVDNIDLYEPNISTVIVIILTGCQI*RNVFRLHTKFPNYAAVQELHRQRXMKFXNFSIT 783
           N+DNIDLYE  I         GCQI R  F +  K+ NY+AVQ+LHR R  +   FS+T
Sbjct: 203 NIDNIDLYE-EIFNGNRANPNGCQI-RGTFFVSHKYTNYSAVQDLHR-RGHEIAVFSLT 258



 Score = 27.9 bits (59), Expect = 0.097
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 204 LKQITCPSGLAFDLDKQPATGRVK 275
           L  + CP GLAFD+++Q    + K
Sbjct: 69  LASVRCPVGLAFDIERQTCDWKTK 92


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score =  177 bits (430), Expect = 1e-46
 Identities = 73/113 (64%), Positives = 83/113 (73%)
 Frame = +2

Query: 254 TCDWKGKVNNCDKLEKPRKVLPILKTDEPICPEGKLACGSGDCIEKELFCNGKPDCKDES 433
           TCDWK  V NC    K RKV P+L TDEP+CP+G LACG G+CIE+ LFCNG+ DC D S
Sbjct: 87  TCDWKDSVKNCKLKNKERKVKPLLITDEPLCPDGSLACGDGNCIERGLFCNGEKDCSDGS 146

Query: 434 DENACTVELDPNRAPDCDPNQCVLXDCFCSADGTRIPGGIEPNQVPQMVTITF 592
           DEN C ++ DPNRAP CDP  CVL DCFCS DGT IPG +    VPQM+TITF
Sbjct: 147 DENTCDIDNDPNRAPPCDPAVCVLPDCFCSEDGTTIPGDLPSKDVPQMITITF 199



 Score = 33.1 bits (72), Expect = 0.003
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +3

Query: 198 SGLKQITCPSGLAFDLDKQ 254
           SGL+ I CP+GL FD+DKQ
Sbjct: 68  SGLQAIRCPAGLYFDIDKQ 86



 Score = 31.1 bits (67), Expect = 0.010
 Identities = 20/48 (41%), Positives = 27/48 (56%)
 Frame = +1

Query: 607 NVDNIDLYEPNISTVIVIILTGCQI*RNVFRLHTKFPNYAAVQELHRQ 750
           N +NI+LY+  I         GC I    F  H K+ NY+AVQE+HR+
Sbjct: 204 NNNNIELYK-EIFNGKRKNPNGCDIKATFFVSH-KYTNYSAVQEMHRK 249


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 417 SGLPLQNNSFSMQSPLPQANLP 352
           +G+PLQN   ++  P+ Q  LP
Sbjct: 187 AGIPLQNPGLNLNPPVTQTQLP 208


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 110 LISCATVDPPMNISVSPPKXLP 175
           LISC +    M +S+ PP  +P
Sbjct: 546 LISCVSRSVSMALSIGPPLVIP 567


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 110 LISCATVDPPMNISVSPPKXLP 175
           LISC +    M +S+ PP  +P
Sbjct: 546 LISCVSRSVSMALSIGPPLVIP 567


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 404 NGKPDCKDESDENAC 448
           NGKP C  E D+  C
Sbjct: 880 NGKPTCWRECDKATC 894


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 56  LHTSEPTNNTPRHRNA 9
           LHT EPT+ TP    A
Sbjct: 216 LHTGEPTDLTPEQIQA 231


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 6   TRVSVSRCVISWFAGM 53
           T ++ S CVISW  G+
Sbjct: 175 TLITYSLCVISWAVGI 190


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 6   TRVSVSRCVISWFAGM 53
           T ++ S CVISW  G+
Sbjct: 175 TLITYSLCVISWAVGI 190


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 254 TCDWKGKVNNCDK 292
           +CDW   V+ C K
Sbjct: 140 SCDWPENVDGCQK 152


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 269 GKVNNCDKLEKPRKVLPILKT 331
           GKV   ++++K +K  P LKT
Sbjct: 143 GKVGLYERIQKLKKANPSLKT 163


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 377 DCIEKELFCNGKPDCKDESDENACTVELD 463
           D I+ + FCNG     D      CT ++D
Sbjct: 545 DDIDPQQFCNGDNRPADCQQNCMCTHKVD 573


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,361
Number of Sequences: 336
Number of extensions: 4121
Number of successful extensions: 34
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)