Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30258
(664 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 140 9e-34
03_01_0547 + 4093196-4093657,4094267-4095148 140 9e-34
03_01_0544 + 4082528-4082989,4083585-4084466 140 9e-34
03_01_0543 + 4076981-4077442,4078145-4079026 140 9e-34
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 97 8e-21
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 95 6e-20
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 91 1e-18
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 91 1e-18
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 89 2e-18
02_04_0462 + 23131433-23132836 59 4e-09
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 58 6e-09
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 31 0.82
02_02_0288 - 8603033-8603436,8603611-8603862,8604530-8605022 31 0.82
07_03_0154 + 14509979-14512033 30 1.4
01_02_0134 + 11470543-11470608,11471718-11471775,11472025-114722... 29 2.5
09_04_0239 + 15954995-15956242 29 3.3
09_04_0232 - 15882589-15882720,15882799-15882889,15882987-158830... 29 3.3
08_02_0869 - 22031889-22032017,22032114-22032204,22032289-220323... 29 3.3
06_03_1278 + 28925766-28927196 29 3.3
02_03_0090 - 15100386-15100414,15100740-15100827,15101025-151010... 29 3.3
01_01_0016 - 88825-90411 29 3.3
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 29 4.4
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950 29 4.4
05_04_0116 + 18131510-18133192 29 4.4
04_04_1120 + 31037811-31038813,31038903-31038991,31039094-310391... 29 4.4
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 28 5.8
03_04_0206 - 18493178-18495310 28 5.8
01_01_0720 - 5593311-5595371,5597550-5598027,5598118-5598146 28 7.6
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 140 bits (339), Expect = 9e-34
Identities = 66/88 (75%), Positives = 77/88 (87%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I N
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCN 153
Query: 182 KMDSTEPPYSEPRFEEIKKEVSSYTRRL 265
KMD+T P YS+ R++EI KEVSSY +++
Sbjct: 154 KMDATTPKYSKARYDEIVKEVSSYLKKV 181
Score = 88.6 bits (210), Expect = 4e-18
Identities = 52/121 (42%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Frame = +1
Query: 256 KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKERQADGKCXXXXXXXXXXX 435
KK+GYNP + FVPISG+ GDNM+E ST + W+KG + Q +
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQIN------------EP 226
Query: 436 XXXXTSPCVFPCKTYTK--SVVLVPCRRQIETGVLKXGTIVVFAPANITTEVKSVEMHHE 609
P P + K + VP R +ETGVLK G +V F P+ +TTEVKSVEMHHE
Sbjct: 227 KRPSDKPLRLPLQDVYKIGGIGTVPVGR-VETGVLKPGMVVTFGPSGLTTEVKSVEMHHE 285
Query: 610 A 612
A
Sbjct: 286 A 286
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +3
Query: 438 RPTDKPLRLSLQDVYQIGGIGTVP 509
RP+DKPLRL LQDVY+IGGIGTVP
Sbjct: 228 RPSDKPLRLPLQDVYKIGGIGTVP 251
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 140 bits (339), Expect = 9e-34
Identities = 66/88 (75%), Positives = 77/88 (87%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I N
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCN 153
Query: 182 KMDSTEPPYSEPRFEEIKKEVSSYTRRL 265
KMD+T P YS+ R++EI KEVSSY +++
Sbjct: 154 KMDATTPKYSKARYDEIVKEVSSYLKKV 181
Score = 88.6 bits (210), Expect = 4e-18
Identities = 52/121 (42%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Frame = +1
Query: 256 KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKERQADGKCXXXXXXXXXXX 435
KK+GYNP + FVPISG+ GDNM+E ST + W+KG + Q +
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQIN------------EP 226
Query: 436 XXXXTSPCVFPCKTYTK--SVVLVPCRRQIETGVLKXGTIVVFAPANITTEVKSVEMHHE 609
P P + K + VP R +ETGVLK G +V F P+ +TTEVKSVEMHHE
Sbjct: 227 KRPSDKPLRLPLQDVYKIGGIGTVPVGR-VETGVLKPGMVVTFGPSGLTTEVKSVEMHHE 285
Query: 610 A 612
A
Sbjct: 286 A 286
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +3
Query: 438 RPTDKPLRLSLQDVYQIGGIGTVP 509
RP+DKPLRL LQDVY+IGGIGTVP
Sbjct: 228 RPSDKPLRLPLQDVYKIGGIGTVP 251
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 140 bits (339), Expect = 9e-34
Identities = 66/88 (75%), Positives = 77/88 (87%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I N
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCN 153
Query: 182 KMDSTEPPYSEPRFEEIKKEVSSYTRRL 265
KMD+T P YS+ R++EI KEVSSY +++
Sbjct: 154 KMDATTPKYSKARYDEIVKEVSSYLKKV 181
Score = 88.6 bits (210), Expect = 4e-18
Identities = 52/121 (42%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Frame = +1
Query: 256 KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKERQADGKCXXXXXXXXXXX 435
KK+GYNP + FVPISG+ GDNM+E ST + W+KG + Q +
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQIN------------EP 226
Query: 436 XXXXTSPCVFPCKTYTK--SVVLVPCRRQIETGVLKXGTIVVFAPANITTEVKSVEMHHE 609
P P + K + VP R +ETGVLK G +V F P+ +TTEVKSVEMHHE
Sbjct: 227 KRPSDKPLRLPLQDVYKIGGIGTVPVGR-VETGVLKPGMVVTFGPSGLTTEVKSVEMHHE 285
Query: 610 A 612
A
Sbjct: 286 A 286
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +3
Query: 438 RPTDKPLRLSLQDVYQIGGIGTVP 509
RP+DKPLRL LQDVY+IGGIGTVP
Sbjct: 228 RPSDKPLRLPLQDVYKIGGIGTVP 251
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 140 bits (339), Expect = 9e-34
Identities = 66/88 (75%), Positives = 77/88 (87%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I N
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCN 153
Query: 182 KMDSTEPPYSEPRFEEIKKEVSSYTRRL 265
KMD+T P YS+ R++EI KEVSSY +++
Sbjct: 154 KMDATTPKYSKARYDEIVKEVSSYLKKV 181
Score = 88.6 bits (210), Expect = 4e-18
Identities = 52/121 (42%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Frame = +1
Query: 256 KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKERQADGKCXXXXXXXXXXX 435
KK+GYNP + FVPISG+ GDNM+E ST + W+KG + Q +
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQIN------------EP 226
Query: 436 XXXXTSPCVFPCKTYTK--SVVLVPCRRQIETGVLKXGTIVVFAPANITTEVKSVEMHHE 609
P P + K + VP R +ETGVLK G +V F P+ +TTEVKSVEMHHE
Sbjct: 227 KRPSDKPLRLPLQDVYKIGGIGTVPVGR-VETGVLKPGMVVTFGPSGLTTEVKSVEMHHE 285
Query: 610 A 612
A
Sbjct: 286 A 286
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +3
Query: 438 RPTDKPLRLSLQDVYQIGGIGTVP 509
RP+DKPLRL LQDVY+IGGIGTVP
Sbjct: 228 RPSDKPLRLPLQDVYKIGGIGTVP 251
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 97.5 bits (232), Expect = 8e-21
Identities = 44/86 (51%), Positives = 61/86 (70%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GH+ ++ NMI+G SQAD VL+++A GEFE G K GQTREH LLA TLGV +LIV +N
Sbjct: 85 GHKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQTREHVLLAKTLGVAKLIVVIN 144
Query: 182 KMDSTEPPYSEPRFEEIKKEVSSYTR 259
KMD +S+ R++EI+ ++ + R
Sbjct: 145 KMDEPTVKWSKERYDEIESKMVPFLR 170
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 94.7 bits (225), Expect = 6e-20
Identities = 41/86 (47%), Positives = 62/86 (72%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GH+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH LLA TLGV +L+V +N
Sbjct: 40 GHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVLLAKTLGVSKLVVVIN 99
Query: 182 KMDSTEPPYSEPRFEEIKKEVSSYTR 259
KMD + +S+ R++EI+ ++ + +
Sbjct: 100 KMDESTVGWSKERYDEIEGKMVPFLK 125
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 90.6 bits (215), Expect = 1e-18
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 5/91 (5%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTREHALLAFTLGVKQL 166
GH+DF+ NMI+G +QAD A+L+V A TG FEAG+ GQT+EHA L + GV+QL
Sbjct: 334 GHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQL 393
Query: 167 IVGVNKMDSTEPPYSEPRFEEIKKEVSSYTR 259
IV VNKMD+ YS+ RFE IK ++ S+ R
Sbjct: 394 IVAVNKMDAI--GYSKERFEFIKVQLGSFLR 422
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 90.6 bits (215), Expect = 1e-18
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 5/91 (5%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTREHALLAFTLGVKQL 166
GH+DF+ NMI+G +QAD A+L+V A TG FEAG+ GQT+EHA L + GV+QL
Sbjct: 334 GHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQL 393
Query: 167 IVGVNKMDSTEPPYSEPRFEEIKKEVSSYTR 259
IV VNKMD+ YS+ RFE IK ++ S+ R
Sbjct: 394 IVAVNKMDAI--GYSKERFEFIKVQLGSFLR 422
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 89.4 bits (212), Expect = 2e-18
Identities = 44/88 (50%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN--GQTREHALLAFTLGVKQLIVG 175
GH+DF+ NMI+G +Q+D A+L++ A G FEAG+ N GQT+EH+ L + GV LIV
Sbjct: 321 GHKDFVPNMISGATQSDAAILVIDASIGSFEAGMGINGIGQTKEHSQLVRSFGVDNLIVV 380
Query: 176 VNKMDSTEPPYSEPRFEEIKKEVSSYTR 259
VNKMDS E YS+ RF IK ++ ++ R
Sbjct: 381 VNKMDSVE--YSKERFNFIKSQLGAFLR 406
Score = 31.1 bits (67), Expect = 0.82
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 2/125 (1%)
Frame = +1
Query: 229 NQEGSILIHKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKERQADGKCXX 408
+Q G+ L + GY +AVA+VPIS +N++ ++ W DG C
Sbjct: 399 SQLGAFL--RSCGYKDSAVAWVPISAMENENLMTTASDTR-LSSWY--------DGNCLL 447
Query: 409 XXXXXXXXXXXXXTSPCVFP-CKTYTK-SVVLVPCRRQIETGVLKXGTIVVFAPANITTE 582
+ P P C ++ + V ++E G + G+ ++ P
Sbjct: 448 KAIDTLPPPSRDVSKPLRLPICDVFSSHKLGQVAIGGKVEVGATRSGSKILVMPFGELAV 507
Query: 583 VKSVE 597
VK++E
Sbjct: 508 VKTIE 512
>02_04_0462 + 23131433-23132836
Length = 467
Score = 58.8 bits (136), Expect = 4e-09
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GH D++KNMITG +Q D A+L+V+ G QT+EH LLA +GV +++V +N
Sbjct: 142 GHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPKIVVFLN 194
Query: 182 KMDSTEPPYSEPRFE-EIKKEVSSY 253
K D + E E+++ +SSY
Sbjct: 195 KKDQVDDEELLQLVELEVRELLSSY 219
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 426 PATARPTDKPLRLSLQDVYQIGGIGTV 506
P R TD P L+++DV+ I G GTV
Sbjct: 269 PVPQRQTDLPFLLAVEDVFSITGRGTV 295
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/68 (42%), Positives = 42/68 (61%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GH D++KNMITG +Q D +L+V+A G QT+EH LLA +GV L+ +N
Sbjct: 139 GHADYVKNMITGAAQMDGGILVVSAPDGPMP-------QTKEHILLARQVGVPSLVCFLN 191
Query: 182 KMDSTEPP 205
K+D+ + P
Sbjct: 192 KVDAVDDP 199
>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -3
Query: 512 RRHGTNTTDLVYVLQGKTQGLVSGAGSGRMASRASMRHFPSACLSLRSTCHPL 354
+RH N DL + + + L G R+ + S++ F + CL L+ HPL
Sbjct: 1145 QRHSKNNNDLAFFTYEEKRKLGYGTQRERLG-KDSIKPFDACCLCLKPLIHPL 1196
>02_02_0288 - 8603033-8603436,8603611-8603862,8604530-8605022
Length = 382
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +2
Query: 377 KKGKLTGNASLKLSMPSCHC---PPH*QAPASFPARRIPNRWYWYRA 508
+ G + S+ + PSCHC P Q P RR P RW Y A
Sbjct: 51 RSGSSSSTLSIAAASPSCHCRHSRPMVQLPLHGYRRRHPGRWSHYFA 97
>07_03_0154 + 14509979-14512033
Length = 684
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = -1
Query: 328 PTCCLRAIQKWARKRQQLGCSQSSCV*GYFLLDFLKSGLTVWWFSGIHFVYSYDELFDTE 149
P+C R QK R R ++ S+ + G LD +K+G + FSGI + E+
Sbjct: 517 PSCPNRVSQKGLRNRLEVFRSRETGW-GVRSLDLIKAGTFICEFSGIVLTHQQSEIMAAN 575
Query: 148 GE 143
G+
Sbjct: 576 GD 577
>01_02_0134 +
11470543-11470608,11471718-11471775,11472025-11472278,
11472307-11472511,11472907-11473142
Length = 272
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = +2
Query: 110 NGQTREHALLAFTLGVKQ----LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYTRRLAT-T 274
N + +EH L T G LIV ++D P +EP+ +E KK S + T T
Sbjct: 81 NDKAKEHELPKGTEGPSTSAIVLIVSEKELDVQVVPENEPKVQEPKKSKSHQVWNVETET 140
Query: 275 QLLSLSCPFLDGTETT 322
+ CP + E T
Sbjct: 141 DVYEDPCPAKNDVENT 156
>09_04_0239 + 15954995-15956242
Length = 415
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -3
Query: 515 CRRHGTNT--TDLVYVLQGKTQGLVSGAGSGRMASRASMRHFPSACL 381
C HG T ++ L+G+T V AGSG MA++A ++ +CL
Sbjct: 370 CTLHGAGAEKTTSMHALRGQTAPKVQHAGSGIMANKAD-KYVVRSCL 415
>09_04_0232 -
15882589-15882720,15882799-15882889,15882987-15883087,
15883494-15883592,15883693-15883830,15883918-15884508,
15884819-15884989,15885068-15885203,15885561-15885592,
15886280-15886336,15886434-15886686,15886762-15886850,
15887181-15887234,15887498-15887689,15887777-15887938
Length = 765
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 261 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 362
DW+ C AHF RRQ +G F A G+
Sbjct: 697 DWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGL 730
>08_02_0869 -
22031889-22032017,22032114-22032204,22032289-22032389,
22033262-22033303,22033393-22033491,22033616-22033753,
22033853-22034428,22034897-22035070,22035155-22035290,
22035694-22035725,22036873-22037125,22037216-22037304,
22037771-22037824,22038801-22038992,22039065-22039229
Length = 756
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 261 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 362
DW+ C AHF RRQ +G F A G+
Sbjct: 689 DWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGL 722
>06_03_1278 + 28925766-28927196
Length = 476
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = -3
Query: 545 VPXFNTPVSICRRHGTNTTDLVYVLQGKTQGLVSGAGSGRMASRASMRHFPSACLSLRST 366
VP +NT +S C R G LV T ++ AGS R S+ SAC LRS
Sbjct: 72 VPLWNTLLSACARSGLPQHALV------TASTMARAGSSR-PDNVSVTILLSACARLRSL 124
Query: 365 CH 360
H
Sbjct: 125 VH 126
>02_03_0090 -
15100386-15100414,15100740-15100827,15101025-15101078,
15101184-15101243,15101352-15101462,15103213-15103287,
15103845-15103901
Length = 157
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 347 LGSRDGRWSVKKGKLTGNASLKLSMPSCHCPPH 445
+G RD WSVK+ + +S + + P C PH
Sbjct: 34 IGKRDTSWSVKRRSSSRGSSHQHAGPDDQCQPH 66
>01_01_0016 - 88825-90411
Length = 528
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 172 YDELFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSA 53
YD F + +G+L L+V+ F+ TGT + D+H A
Sbjct: 241 YDAAF--RDHARRGLLPALSVIEPRYFDLTGTPADDDHPA 278
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/79 (25%), Positives = 36/79 (45%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GH + M+ G + D A+L++AA QT EH + ++ +I+ N
Sbjct: 157 GHDILMATMLNGAAIMDGALLLIAANES------CPQPQTSEHLAAVEIMRLQHIIILQN 210
Query: 182 KMDSTEPPYSEPRFEEIKK 238
K+D + + + E I+K
Sbjct: 211 KIDLIQEGAAMNQHEAIQK 229
>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
Length = 346
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 362 HPLNQGILVEGSNMLSPCHPEMGTKATAAG 273
HP +L G N L+ C+P + AT AG
Sbjct: 258 HPSLNQLLGVGDNFLAECYPSTASTATVAG 287
>05_04_0116 + 18131510-18133192
Length = 560
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = -2
Query: 228 SSNLGSLYGGSVE-SILFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPA---ATMS 61
+S G GGS+ S+ P S T V S P + PA+ +P PA ATM+
Sbjct: 66 ASGSGEGQGGSMSLSLQLRPLGSTPTAAVAVSVPPMAAAPMMAGPAAAAPAPAPPLATMA 125
Query: 60 TAQSA 46
AQ+A
Sbjct: 126 VAQNA 130
>04_04_1120 +
31037811-31038813,31038903-31038991,31039094-31039163,
31039270-31039353,31039452-31039528,31039631-31039712,
31039847-31039929,31040270-31040333,31040435-31040566,
31040674-31040777,31040901-31040996,31041144-31041251
Length = 663
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 7/57 (12%)
Frame = +2
Query: 293 CPFLDGTE------TTCWSLQP-KCLGSRDGRWSVKKGKLTGNASLKLSMPSCHCPP 442
CP +DG + T C ++ P +C + G W + T +A + C CPP
Sbjct: 451 CPVVDGVQYQGDGYTHCKAVGPGRCAMNNGGCWKGTRDGKTFSACSDSDLSGCKCPP 507
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 238 LLDFLKSGLTVWWFSGIHFVY 176
+L+ GL VW GIHFVY
Sbjct: 234 ILEIKTGGLVVWTRGGIHFVY 254
>03_04_0206 - 18493178-18495310
Length = 710
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 176 VNKMDSTEPPYSEPRFEEIKKEV 244
VNK D T Y + EEIKKEV
Sbjct: 686 VNKFDGTFEDYKDELLEEIKKEV 708
>01_01_0720 - 5593311-5595371,5597550-5598027,5598118-5598146
Length = 855
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = -2
Query: 480 IRLAGKDAGACQWGGQWQDGIESFNEAFPVSLPFFTLHLPSLEPRHFG*RLQHVVSVPSR 301
+RL GKD G++ G S+ E P L L LP + + Q V +V +
Sbjct: 565 VRLMGKDLAVSTTRGEYVSGTHSYTEDHPTKL---FLELPRQGRPYLSLQAQSVPNVSAN 621
Query: 300 NGHESDS 280
+ S S
Sbjct: 622 SASPSQS 628
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,617,183
Number of Sequences: 37544
Number of extensions: 471668
Number of successful extensions: 1582
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1574
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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