Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30258
(664 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 153 1e-37
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 153 1e-37
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 132 2e-31
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 130 1e-30
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 109 2e-24
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 109 2e-24
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 100 2e-21
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 64 6e-11
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 64 6e-11
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 55 5e-08
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 55 5e-08
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 55 5e-08
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 33 0.14
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.14
Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 30 1.3
U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical p... 28 5.1
U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical p... 28 5.1
U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonin... 28 5.1
U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase ... 28 5.1
U11280-4|AAM97951.2| 353|Caenorhabditis elegans Protein kinase ... 28 5.1
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 28 5.1
U88315-18|ABO16437.1| 99|Caenorhabditis elegans Hypothetical p... 28 6.8
U97403-8|AAB52470.1| 720|Caenorhabditis elegans Hypothetical pr... 27 9.0
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 153 bits (371), Expect = 1e-37
Identities = 72/88 (81%), Positives = 78/88 (88%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV N
Sbjct: 94 GHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACN 153
Query: 182 KMDSTEPPYSEPRFEEIKKEVSSYTRRL 265
KMDSTEPP+SE RF EI EVS + +++
Sbjct: 154 KMDSTEPPFSEARFTEITNEVSGFIKKI 181
Score = 132 bits (319), Expect = 2e-31
Identities = 66/125 (52%), Positives = 78/125 (62%), Gaps = 2/125 (1%)
Frame = +1
Query: 256 KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKERQADGKCXXXXXXXXXXX 435
KKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKE A GK
Sbjct: 179 KKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPP 238
Query: 436 XXXXTSPCVFPCKTYTK--SVVLVPCRRQIETGVLKXGTIVVFAPANITTEVKSVEMHHE 609
P P + K + VP R +ETG++K G +V FAP N+TTEVKSVEMHHE
Sbjct: 239 QRPTDRPLRLPLQDVYKIGGIGTVPVGR-VETGIIKPGMVVTFAPQNVTTEVKSVEMHHE 297
Query: 610 AFPRS 624
+ P +
Sbjct: 298 SLPEA 302
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 153 bits (371), Expect = 1e-37
Identities = 72/88 (81%), Positives = 78/88 (88%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV N
Sbjct: 94 GHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACN 153
Query: 182 KMDSTEPPYSEPRFEEIKKEVSSYTRRL 265
KMDSTEPP+SE RF EI EVS + +++
Sbjct: 154 KMDSTEPPFSEARFTEITNEVSGFIKKI 181
Score = 132 bits (319), Expect = 2e-31
Identities = 66/125 (52%), Positives = 78/125 (62%), Gaps = 2/125 (1%)
Frame = +1
Query: 256 KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKERQADGKCXXXXXXXXXXX 435
KKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKE A GK
Sbjct: 179 KKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPP 238
Query: 436 XXXXTSPCVFPCKTYTK--SVVLVPCRRQIETGVLKXGTIVVFAPANITTEVKSVEMHHE 609
P P + K + VP R +ETG++K G +V FAP N+TTEVKSVEMHHE
Sbjct: 239 QRPTDRPLRLPLQDVYKIGGIGTVPVGR-VETGIIKPGMVVTFAPQNVTTEVKSVEMHHE 297
Query: 610 AFPRS 624
+ P +
Sbjct: 298 SLPEA 302
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 132 bits (319), Expect = 2e-31
Identities = 66/125 (52%), Positives = 78/125 (62%), Gaps = 2/125 (1%)
Frame = +1
Query: 256 KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKERQADGKCXXXXXXXXXXX 435
KKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKE A GK
Sbjct: 145 KKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPP 204
Query: 436 XXXXTSPCVFPCKTYTK--SVVLVPCRRQIETGVLKXGTIVVFAPANITTEVKSVEMHHE 609
P P + K + VP R +ETG++K G +V FAP N+TTEVKSVEMHHE
Sbjct: 205 QRPTDRPLRLPLQDVYKIGGIGTVPVGR-VETGIIKPGMVVTFAPQNVTTEVKSVEMHHE 263
Query: 610 AFPRS 624
+ P +
Sbjct: 264 SLPEA 268
Score = 53.2 bits (122), Expect(2) = 6e-16
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVA 73
GHRDFIKNMITGTSQADCAVL+VA
Sbjct: 94 GHRDFIKNMITGTSQADCAVLVVA 117
Score = 48.4 bits (110), Expect(2) = 6e-16
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +2
Query: 164 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYTRRL 265
L+V NKMDSTEPP+SE RF EI EVS + +++
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKI 147
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 130 bits (313), Expect = 1e-30
Identities = 79/144 (54%), Positives = 85/144 (59%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQL+
Sbjct: 94 GHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLV---- 149
Query: 182 KMDSTEPPYSEPRFEEIKKEVSSYTRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSRD 361
S P P +RR T Q L D TETTC C GSRD
Sbjct: 150 ---SLRSPTRSP----------DSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRD 196
Query: 362 GRWSVKKGKLTGNASLKLSMPSCH 433
G + +K L S +L PS H
Sbjct: 197 GLLNARKETLPERPSSRLLTPSSH 220
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 109 bits (261), Expect = 2e-24
Identities = 53/89 (59%), Positives = 66/89 (74%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV QLIV VN
Sbjct: 257 GHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVN 316
Query: 182 KMDSTEPPYSEPRFEEIKKEVSSYTRRLA 268
K+D+ + +S+ RF+EIK +S + R A
Sbjct: 317 KLDTVD--WSQDRFDEIKNNLSVFLTRQA 343
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/40 (27%), Positives = 26/40 (65%)
Frame = +1
Query: 241 SILIHKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 360
S+ + ++ G++ FVP+SG+ G+N+++ ++ W+ G
Sbjct: 336 SVFLTRQAGFSKPK--FVPVSGFTGENLIK-RMELDWYDG 372
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 109 bits (261), Expect = 2e-24
Identities = 53/89 (59%), Positives = 66/89 (74%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV QLIV VN
Sbjct: 275 GHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVN 334
Query: 182 KMDSTEPPYSEPRFEEIKKEVSSYTRRLA 268
K+D+ + +S+ RF+EIK +S + R A
Sbjct: 335 KLDTVD--WSQDRFDEIKNNLSVFLTRQA 361
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/40 (27%), Positives = 26/40 (65%)
Frame = +1
Query: 241 SILIHKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 360
S+ + ++ G++ FVP+SG+ G+N+++ ++ W+ G
Sbjct: 354 SVFLTRQAGFSKPK--FVPVSGFTGENLIK-RMELDWYDG 390
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 99.5 bits (237), Expect = 2e-21
Identities = 47/106 (44%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GH+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH++L T GVK L++ VN
Sbjct: 196 GHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVKHLVILVN 255
Query: 182 KMDSTEPPYSEPRFEEIKKEVSSYTRRLA---TTQLLSLSCPFLDG 310
KMD + E RF+EI+ +++ + R+L T + + C L G
Sbjct: 256 KMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTG 301
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 64.5 bits (150), Expect = 6e-11
Identities = 34/66 (51%), Positives = 42/66 (63%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GH DFIKNMI GTSQ D AVL++AA G E QT+EH +LA +GVK + + +N
Sbjct: 117 GHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAIFIN 169
Query: 182 KMDSTE 199
K D E
Sbjct: 170 KADLVE 175
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 64.5 bits (150), Expect = 6e-11
Identities = 34/66 (51%), Positives = 42/66 (63%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GH DFIKNMI GTSQ D AVL++AA G E QT+EH +LA +GVK + + +N
Sbjct: 117 GHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAIFIN 169
Query: 182 KMDSTE 199
K D E
Sbjct: 170 KADLVE 175
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 54.8 bits (126), Expect = 5e-08
Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--KQLIVG 175
GH D+IKNMITG +Q + A+L+VAA G QTREH LLA +GV ++V
Sbjct: 121 GHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLDNIVVF 173
Query: 176 VNKMDSTEPPYSEPR 220
+NK+D E P +E R
Sbjct: 174 MNKVD--EVPDAETR 186
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 54.8 bits (126), Expect = 5e-08
Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--KQLIVG 175
GH D+IKNMITG +Q + A+L+VAA G QTREH LLA +GV ++V
Sbjct: 122 GHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLDNIVVF 174
Query: 176 VNKMDSTEPPYSEPR 220
+NK+D E P +E R
Sbjct: 175 MNKVD--EVPDAETR 187
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 54.8 bits (126), Expect = 5e-08
Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--KQLIVG 175
GH D+IKNMITG +Q + A+L+VAA G QTREH LLA +GV ++V
Sbjct: 122 GHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLDNIVVF 174
Query: 176 VNKMDSTEPPYSEPR 220
+NK+D E P +E R
Sbjct: 175 MNKVD--EVPDAETR 187
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GH I+ ++ ++ D A++I+ + AGI QT EH LLA ++I+ +N
Sbjct: 81 GHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPNRVIIVLN 133
Query: 182 KMDSTEPPYSEPRFEEIKKEVSS 250
K D E ++++K + S
Sbjct: 134 KCDLAEKSKISESAKKVRKGLKS 156
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 183 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 55
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical
protein C44H9.4 protein.
Length = 1099
Score = 31.1 bits (67), Expect = 0.73
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 458 QGLVSGAGSGRMASRASM-RHFPSACLSLRSTCHPLNQGIL 339
QGL+ G G+ +RAS + FP + L L CHP IL
Sbjct: 793 QGLLKDYGIGKTMARASRDKMFPQSILRLVYRCHPTTTKIL 833
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GH F G AD VL+VAA G E QT + A V QL+V VN
Sbjct: 213 GHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVN 264
Query: 182 KMD 190
K+D
Sbjct: 265 KID 267
>U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical
protein C37H5.13b protein.
Length = 132
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = -2
Query: 429 QDGIESFNEAFPVSLPFFT-LHLPSLEPRHFG*RLQHVVSVPSRNGHESDSSWVVANLLV 253
Q +ES +S P T + + HF R QHV S PSR+ D + V ++
Sbjct: 22 QKRLESLTTGNGMSSPSSTHANTAPVVQSHFAHRPQHVSSAPSRSMEIDDQNGVQHYPML 81
Query: 252 YEDTSFLISSNLGSLYGGSVESIL 181
T ++S + G +++ L
Sbjct: 82 LNVTHIDMTSRADDIRAGLIDTFL 105
>U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical
protein C37H5.13a protein.
Length = 414
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = -2
Query: 429 QDGIESFNEAFPVSLPFFT-LHLPSLEPRHFG*RLQHVVSVPSRNGHESDSSWVVANLLV 253
Q +ES +S P T + + HF R QHV S PSR+ D + V ++
Sbjct: 22 QKRLESLTTGNGMSSPSSTHANTAPVVQSHFAHRPQHVSSAPSRSMEIDDQNGVQHYPML 81
Query: 252 YEDTSFLISSNLGSLYGGSVESIL 181
T ++S + G +++ L
Sbjct: 82 LNVTHIDMTSRADDIRAGLIDTFL 105
>U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonine
kinase protein.
Length = 982
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 170 VGVNKMDSTEPPYSEPRFEEIKKEVSSYTRRLATTQLLSLSCPFLDGTETTCWSLQPKCL 349
V + KM+ + E ++ +I KEVS + + ++ FL +TTCW + C+
Sbjct: 56 VAIKKMNFSGKQAVE-KWNDILKEVS-FLNTVVHPHIVDYKACFLK--DTTCWLVMEYCI 111
Query: 350 GS 355
GS
Sbjct: 112 GS 113
>U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase
protein 18, isoforma protein.
Length = 982
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 170 VGVNKMDSTEPPYSEPRFEEIKKEVSSYTRRLATTQLLSLSCPFLDGTETTCWSLQPKCL 349
V + KM+ + E ++ +I KEVS + + ++ FL +TTCW + C+
Sbjct: 56 VAIKKMNFSGKQAVE-KWNDILKEVS-FLNTVVHPHIVDYKACFLK--DTTCWLVMEYCI 111
Query: 350 GS 355
GS
Sbjct: 112 GS 113
>U11280-4|AAM97951.2| 353|Caenorhabditis elegans Protein kinase
protein 18, isoformb protein.
Length = 353
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 170 VGVNKMDSTEPPYSEPRFEEIKKEVSSYTRRLATTQLLSLSCPFLDGTETTCWSLQPKCL 349
V + KM+ + E ++ +I KEVS + + ++ FL +TTCW + C+
Sbjct: 56 VAIKKMNFSGKQAVE-KWNDILKEVS-FLNTVVHPHIVDYKACFLK--DTTCWLVMEYCI 111
Query: 350 GS 355
GS
Sbjct: 112 GS 113
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/77 (24%), Positives = 32/77 (41%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GH + M+ G + D A L+VA QT EH + + L++ N
Sbjct: 136 GHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQLNHLMILQN 189
Query: 182 KMDSTEPPYSEPRFEEI 232
K+D + + +E+I
Sbjct: 190 KVDIIKESQARENYEQI 206
>U88315-18|ABO16437.1| 99|Caenorhabditis elegans Hypothetical
protein C37H5.13c protein.
Length = 99
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -2
Query: 345 HFG*RLQHVVSVPSRNGHESDSSWVVANLLVYEDTSFLISSNLGSLYGGSVESIL 181
HF R QHV S PSR+ D + V ++ T ++S + G +++ L
Sbjct: 18 HFAHRPQHVSSAPSRSMEIDDQNGVQHYPMLLNVTHIDMTSRADDIRAGLIDTFL 72
>U97403-8|AAB52470.1| 720|Caenorhabditis elegans Hypothetical
protein T10E9.2 protein.
Length = 720
Score = 27.5 bits (58), Expect = 9.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 534 EXRYHCCLCPRQH 572
E ++ CCLCPR H
Sbjct: 346 EFKWRCCLCPRAH 358
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,574,307
Number of Sequences: 27780
Number of extensions: 364960
Number of successful extensions: 1094
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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