Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30258
(664 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 175 4e-46
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 175 4e-46
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 175 4e-46
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 169 2e-44
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.49
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 23 2.0
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 4.5
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 7.9
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 7.9
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 7.9
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 7.9
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 175 bits (425), Expect = 4e-46
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN
Sbjct: 21 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 80
Query: 182 KMDSTEPPYSEPRFEEIKKEVSSYTRRL 265
KMDSTEPPYSE RFEEIKKEVSSY +++
Sbjct: 81 KMDSTEPPYSETRFEEIKKEVSSYIKKI 108
Score = 101 bits (241), Expect = 8e-24
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = +1
Query: 256 KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKERQADGKC 402
KKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKE + +GKC
Sbjct: 106 KKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKC 154
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 175 bits (425), Expect = 4e-46
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN
Sbjct: 37 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 96
Query: 182 KMDSTEPPYSEPRFEEIKKEVSSYTRRL 265
KMDSTEPPYSE RFEEIKKEVSSY +++
Sbjct: 97 KMDSTEPPYSETRFEEIKKEVSSYIKKI 124
Score = 144 bits (349), Expect = 7e-37
Identities = 72/121 (59%), Positives = 80/121 (66%), Gaps = 2/121 (1%)
Frame = +1
Query: 256 KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKERQADGKCXXXXXXXXXXX 435
KKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKE + +GKC
Sbjct: 122 KKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPP 181
Query: 436 XXXXTSPCVFPCKTYTK--SVVLVPCRRQIETGVLKXGTIVVFAPANITTEVKSVEMHHE 609
P + K + VP R +ETGVLK G +V FAPA +TTEVKSVEMHHE
Sbjct: 182 TRPTDKALRLPLQDVYKIGGIGTVPVGR-VETGVLKPGMVVTFAPAGLTTEVKSVEMHHE 240
Query: 610 A 612
A
Sbjct: 241 A 241
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 175 bits (425), Expect = 4e-46
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 153
Query: 182 KMDSTEPPYSEPRFEEIKKEVSSYTRRL 265
KMDSTEPPYSE RFEEIKKEVSSY +++
Sbjct: 154 KMDSTEPPYSETRFEEIKKEVSSYIKKI 181
Score = 144 bits (349), Expect = 7e-37
Identities = 72/121 (59%), Positives = 80/121 (66%), Gaps = 2/121 (1%)
Frame = +1
Query: 256 KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKERQADGKCXXXXXXXXXXX 435
KKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKE + +GKC
Sbjct: 179 KKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPP 238
Query: 436 XXXXTSPCVFPCKTYTK--SVVLVPCRRQIETGVLKXGTIVVFAPANITTEVKSVEMHHE 609
P + K + VP R +ETGVLK G +V FAPA +TTEVKSVEMHHE
Sbjct: 239 TRPTDKALRLPLQDVYKIGGIGTVPVGR-VETGVLKPGMVVTFAPAGLTTEVKSVEMHHE 297
Query: 610 A 612
A
Sbjct: 298 A 298
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 169 bits (411), Expect = 2e-44
Identities = 80/88 (90%), Positives = 84/88 (95%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQTREHALLAFTLGVKQLIVGVN
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 153
Query: 182 KMDSTEPPYSEPRFEEIKKEVSSYTRRL 265
KMD T+PPYSE RFEEIKKEVSSY +++
Sbjct: 154 KMDMTDPPYSEARFEEIKKEVSSYIKKI 181
Score = 136 bits (328), Expect = 2e-34
Identities = 68/121 (56%), Positives = 78/121 (64%), Gaps = 2/121 (1%)
Frame = +1
Query: 256 KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKERQADGKCXXXXXXXXXXX 435
KKIGYN A+VAFVPISGWHGDNMLEPS K PW+KGW+VERK+ ADGK
Sbjct: 179 KKIGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPP 238
Query: 436 XXXXTSPCVFPCKTYTK--SVVLVPCRRQIETGVLKXGTIVVFAPANITTEVKSVEMHHE 609
P + K + VP R +ETG+LK G +V FAPA +TTEVKSVEMHHE
Sbjct: 239 SRPTDKALRLPLQDVYKIGGIGTVPVGR-VETGILKPGMLVTFAPAALTTEVKSVEMHHE 297
Query: 610 A 612
A
Sbjct: 298 A 298
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.4 bits (53), Expect = 0.49
Identities = 24/78 (30%), Positives = 33/78 (42%)
Frame = +2
Query: 2 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 181
GH FI G D VL+VAA G E QT + +A V +IV +N
Sbjct: 202 GHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV-PIIVAIN 253
Query: 182 KMDSTEPPYSEPRFEEIK 235
K+D + ++E K
Sbjct: 254 KIDKPNIDIIKVQYELAK 271
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1
Query: 586 KSVEMHHEA 612
KSVEMHHEA
Sbjct: 1 KSVEMHHEA 9
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 393 REMPH*SSRCHPATARPTDKPLRLS 467
RE P + H +A P D+PL LS
Sbjct: 492 REAPLVGVQPHQDSATPADQPLDLS 516
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 206 YSEPRFEEIKKEVSSYTRRLATTQLLSL 289
Y+E + I+ + SYT A + LS+
Sbjct: 58 YNEGQAWNIEANIDSYTNAAAVKEFLSI 85
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 206 YSEPRFEEIKKEVSSYTRRLATTQLLSL 289
Y+E + I+ + SYT A + LS+
Sbjct: 58 YNEGQAWNIEANIDSYTNAAAVKEFLSI 85
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 342 FG*RLQHVVSVPSRNGHESDSSWV 271
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 186 WIPLNHHTVSPDLRKSRRKY 245
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,391
Number of Sequences: 438
Number of extensions: 4526
Number of successful extensions: 30
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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