Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30257
(747 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 101 5e-22
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 55 5e-08
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 55 5e-08
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 55 5e-08
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 45 5e-05
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 45 5e-05
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 45 7e-05
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 45 7e-05
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 43 3e-04
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 43 3e-04
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 43 3e-04
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 40 0.002
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 40 0.002
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 39 0.004
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 39 0.004
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z81147-9|CAB03538.1| 349|Caenorhabditis elegans Hypothetical pr... 28 8.1
U58730-1|AAC48058.1| 514|Caenorhabditis elegans Inward rectifyi... 28 8.1
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 101 bits (242), Expect = 5e-22
Identities = 48/98 (48%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
Frame = +1
Query: 217 DKRHKKH*RSYKGIVAAIMSKQYGHEQFISELVTKACVAILPEKT-TFNVDNVRVCKILG 393
D ++ + R Y I +AI SKQY +E I++LV KACV P + FNVDN+R+CKI+G
Sbjct: 152 DMKNIEEVRQY--IRSAITSKQYDNEDIIADLVAKACVTTCPANSFNFNVDNIRICKIIG 209
Query: 394 AGLLQSEVLSGMVFRREVEGDVSSAKNAKIAVYSCPID 507
+G+ S V++GMVF+R EG++ A++A+IAVY+CP D
Sbjct: 210 SGVHTSTVMNGMVFKRGAEGEIREARDARIAVYTCPFD 247
Score = 85.0 bits (201), Expect = 5e-17
Identities = 35/86 (40%), Positives = 59/86 (68%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDK 181
+HPAA+++++A++MQ+ ++GD TN V++L+ +G+T E+A GYE+A +K
Sbjct: 78 QHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEK 137
Query: 182 CLEILPSLICNEIKDTKNIKEVTKVL 259
LEILP+L+ E D KNI+EV + +
Sbjct: 138 ALEILPTLVVKEATDMKNIEEVRQYI 163
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3
Query: 513 QTETKGTVLIKSADELLNFSKGEESLLEKQIKDISDSGVKVIVA 644
QTETKGTVLI++ADEL NFSKGEE+ +E+Q+K I+D+ I+A
Sbjct: 250 QTETKGTVLIENADELRNFSKGEEAEVEEQVKAIADNARSSILA 293
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/42 (61%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
Frame = +3
Query: 558 LLNFSKGEESLLEKQ-IKDISDSGVKVIVAGAKFGDMGLTLL 680
L+NFSKGEE+ +E+Q +K I+D+GVKV+VA KFGDM L L
Sbjct: 297 LMNFSKGEEAEVEEQQVKAIADNGVKVVVAAGKFGDMYLHFL 338
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 55.2 bits (127), Expect = 5e-08
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDK 181
+H AKLMV S+ QD E+GDGT V+VL+G G+ +IADG++ A K
Sbjct: 85 QHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKK 144
Query: 182 CLEILPSL 205
LE L S+
Sbjct: 145 ALETLDSI 152
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 55.2 bits (127), Expect = 5e-08
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDK 181
+H AKLMV S+ QD E+GDGT V+VL+G G+ +IADG++ A K
Sbjct: 85 QHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKK 144
Query: 182 CLEILPSL 205
LE L S+
Sbjct: 145 ALETLDSI 152
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 55.2 bits (127), Expect = 5e-08
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDK 181
+H AKLMV S+ QD E+GDGT V+VL+G G+ +IADG++ A K
Sbjct: 85 QHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKK 144
Query: 182 CLEILPSL 205
LE L S+
Sbjct: 145 ALETLDSI 152
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/65 (32%), Positives = 36/65 (55%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDK 181
EHPA K++V +Q+QD EVGDGT V++++ + V + I +GY A +
Sbjct: 72 EHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKE 131
Query: 182 CLEIL 196
++ +
Sbjct: 132 AVKYI 136
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/65 (32%), Positives = 36/65 (55%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDK 181
EHPA K++V +Q+QD EVGDGT V++++ + V + I +GY A +
Sbjct: 72 EHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKE 131
Query: 182 CLEIL 196
++ +
Sbjct: 132 AVKYI 136
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 5 HPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKC 184
HP AK++V S+ QD E GDGT V+V++G G+ + I++ ++ A +
Sbjct: 84 HPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEA 143
Query: 185 LEILPSL 205
+IL +
Sbjct: 144 EKILDEM 150
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 5 HPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKC 184
HP AK++V S+ QD E GDGT V+V++G G+ + I++ ++ A +
Sbjct: 84 HPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEA 143
Query: 185 LEILPSL 205
+IL +
Sbjct: 144 EKILDEM 150
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/98 (28%), Positives = 47/98 (47%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDK 181
+HPAAK M+ ++ QD E GDGT VI+L+G + I Y +AL+
Sbjct: 75 KHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALED 134
Query: 182 CLEILPSLICNEIKDTKNIKEVTKVLLLLSCLNNMVMN 295
++ + + D + E+ KV + SCL +++
Sbjct: 135 MIQWSENKFSKTV-DITDDAEIAKV--VKSCLGTKMIS 169
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/81 (35%), Positives = 39/81 (48%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDK 181
++PAAK++V S QD EVGDGT V VL+ + I GY RAL
Sbjct: 74 DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGI 133
Query: 182 CLEILPSLICNEIKDTKNIKE 244
E SL + I+ NI++
Sbjct: 134 AQE---SLKKSSIESGDNIRD 151
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/81 (35%), Positives = 39/81 (48%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDK 181
++PAAK++V S QD EVGDGT V VL+ + I GY RAL
Sbjct: 74 DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGI 133
Query: 182 CLEILPSLICNEIKDTKNIKE 244
E SL + I+ NI++
Sbjct: 134 AQE---SLKKSSIESGDNIRD 151
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/81 (35%), Positives = 39/81 (48%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDK 181
++PAAK++V S QD EVGDGT V VL+ + I GY RAL
Sbjct: 74 DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGI 133
Query: 182 CLEILPSLICNEIKDTKNIKE 244
E SL + I+ NI++
Sbjct: 134 AQE---SLKKSSIESGDNIRD 151
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDK 181
+HP A ++ AS QD GDGT ++L G G+ + +G+E A K
Sbjct: 70 QHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTK 129
Query: 182 CLEIL 196
LE+L
Sbjct: 130 TLELL 134
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDK 181
+HP A ++ AS QD GDGT ++L G G+ + +G+E A K
Sbjct: 70 QHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTK 129
Query: 182 CLEIL 196
LE+L
Sbjct: 130 TLELL 134
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = +2
Query: 8 PAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCL 187
PAA MV ++ QDAEVGDGT V+VL+ GV + +A +K L
Sbjct: 74 PAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTL 133
Query: 188 EILPSL 205
+ L L
Sbjct: 134 KNLADL 139
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = +2
Query: 8 PAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCL 187
PAA MV ++ QDAEVGDGT V+VL+ GV + +A +K L
Sbjct: 74 PAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTL 133
Query: 188 EILPSL 205
+ L L
Sbjct: 134 KNLADL 139
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 292 EQFISELVTKACVAILPEKTTFNVDNVRV 378
E + EL+ +AC +PE+T F +D V V
Sbjct: 909 ESLVEELIEEACYGEIPEETLFALDEVEV 937
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical protein
C03D6.4 protein.
Length = 1390
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 640 TITFTPESEISLICFSSKDSSPLLKFSNSSALLMRTVPLVSV 515
T+ T ES I + SSPL+K + ++A T P V+V
Sbjct: 881 TVVVTVESPAKPIASAPAVSSPLIKLNTTTATTTMTTPKVTV 922
>Z81147-9|CAB03538.1| 349|Caenorhabditis elegans Hypothetical
protein T09E11.11 protein.
Length = 349
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +2
Query: 263 LLSCLNNMVMNNSFLSLSRKPVLQYYQKKLHLMLIMLEF 379
L++CL + N+F SL ++++ Q+K L+ + + F
Sbjct: 61 LITCLETGALFNNFSSLQAHMIIRFSQRKQILVYVTISF 99
>U58730-1|AAC48058.1| 514|Caenorhabditis elegans Inward rectifying
k (potassium)channel family protein 2 protein.
Length = 514
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 158 GYERALDKCLEILPSLICNEIKDTKNIKEV 247
GY++ LD+ I P IC+EI + + E+
Sbjct: 291 GYDQGLDRVFVIWPITICHEIDERSPLWEI 320
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,901,836
Number of Sequences: 27780
Number of extensions: 311308
Number of successful extensions: 977
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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