Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30257
(747 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-P... 85 4e-17
At5g26360.1 68418.m03151 chaperonin, putative similar to SWISS-P... 48 7e-06
At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, pu... 48 9e-06
At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, pu... 48 9e-06
At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit / TCP... 47 1e-05
At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-P... 46 3e-05
At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P... 44 1e-04
At3g11830.1 68416.m01450 chaperonin, putative similar to SWISS-P... 41 0.001
At4g08640.1 68417.m01421 hypothetical protein low similarity to ... 37 0.012
At3g32940.1 68416.m04174 expressed protein 33 0.15
At5g05680.1 68418.m00625 nuclear pore complex protein-related co... 31 0.81
At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-P... 30 1.4
At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-P... 30 1.9
At2g46600.1 68415.m05812 calcium-binding protein, putative simil... 29 2.5
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 29 4.3
At5g41910.1 68418.m05102 RNA polymerase II mediator complex prot... 28 5.7
At4g11050.1 68417.m01796 endo-1,4-beta-glucanase, putative / cel... 28 7.6
At1g11050.1 68414.m01266 protein kinase family protein contains ... 28 7.6
At5g08300.1 68418.m00977 succinyl-CoA ligase [GDP-forming] alpha... 27 10.0
At1g77450.1 68414.m09019 no apical meristem (NAM) family protein... 27 10.0
At1g20570.1 68414.m02565 tubulin family protein 27 10.0
>At3g03960.1 68416.m00415 chaperonin, putative similar to
SWISS-PROT:P42932- T-complex protein 1, theta subunit
(TCP-1-theta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 549
Score = 85.4 bits (202), Expect = 4e-17
Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Frame = +1
Query: 262 AAIMSKQYGHEQFISELVTKACVAILPEK-TTFNVDNVRVCKILGAGLLQSEVLSGMVFR 438
AA+ SKQ+G E+ I LVT AC+ + P+ T FNVDNVRV K+LG GL S ++ GMV +
Sbjct: 168 AAVASKQFGQEEIICSLVTDACIQVCPKNPTNFNVDNVRVSKLLGGGLHNSCIVRGMVLK 227
Query: 439 REVEGDVSSAKNAKIAVYSCPIDKXXXXXXXXXXXXXXMNY*TSVKEKNLYLKSRLKIFP 618
+ G + + AK+AV++ +D K + ++ +K
Sbjct: 228 SDAVGSIKRMEKAKVAVFAGGVDTTATETKGTVLIHSAEQLENYAKTEEAKVEELIKAVA 287
Query: 619 TXXXXXXXXXXXXEIWALHFLNKYHYYGLSRLNSKFDIR 735
ALHF +Y L +++SKF++R
Sbjct: 288 ESGAKVIVSGGSIGEMALHFCERYKIMVL-KISSKFELR 325
Score = 67.7 bits (158), Expect = 8e-12
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDK 181
+HPAAKL+VLA++ Q E+GDG N I +G R+G+ SEI GY +A+ K
Sbjct: 79 QHPAAKLLVLAAKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEIISGYTKAVSK 138
Query: 182 CLEILPSLI--CNEIKDTKNIKEV 247
+EIL L+ +E D +N EV
Sbjct: 139 AVEILEQLVETGSETMDVRNKDEV 162
Score = 64.1 bits (149), Expect = 9e-11
Identities = 33/72 (45%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = +3
Query: 516 TETKGTVLIKSADELLNFSKGEESLLEKQIKDISDSGVKVIVAGAKFGDMGLTLLE*IPL 695
TETKGTVLI SA++L N++K EE+ +E+ IK +++SG KVIV+G G+M L E +
Sbjct: 254 TETKGTVLIHSAEQLENYAKTEEAKVEELIKAVAESGAKVIVSGGSIGEMALHFCERYKI 313
Query: 696 L-WAVPS*FQIR 728
+ + S F++R
Sbjct: 314 MVLKISSKFELR 325
>At5g26360.1 68418.m03151 chaperonin, putative similar to
SWISS-PROT:P50143- T-complex protein 1, gamma subunit
(TCP-1-gamma) [Xenopus laevis]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 555
Score = 48.0 bits (109), Expect = 7e-06
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +2
Query: 5 HPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKC 184
HPAAK M+ S+ QD EVGDGT VIVL+G + I Y +AL+
Sbjct: 72 HPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFLEKNYHPTVICRAYIKALEDS 131
Query: 185 LEILPSLICN-EIKDTKNIKEVTK 253
+ +L + + +I D + + K
Sbjct: 132 IAVLDKIAMSIDINDRSQVLGLVK 155
>At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 459
Score = 47.6 bits (108), Expect = 9e-06
Identities = 32/105 (30%), Positives = 52/105 (49%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDK 181
++ AKLMV S+ QD E+GDGT V+V++G G+ IA+GYE A
Sbjct: 4 DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMASRV 63
Query: 182 CLEILPSLICNEIKDTKNIKEVTKVLLLLSCLNNMVMNNSFLSLS 316
+E L + D N + + V ++ L++ ++N SL+
Sbjct: 64 AVEHLERIAQKFEFDVNNYEPL--VQTCMTTLSSKIVNRCKRSLA 106
>At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 535
Score = 47.6 bits (108), Expect = 9e-06
Identities = 32/105 (30%), Positives = 52/105 (49%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDK 181
++ AKLMV S+ QD E+GDGT V+V++G G+ IA+GYE A
Sbjct: 80 DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMASRV 139
Query: 182 CLEILPSLICNEIKDTKNIKEVTKVLLLLSCLNNMVMNNSFLSLS 316
+E L + D N + + V ++ L++ ++N SL+
Sbjct: 140 AVEHLERIAQKFEFDVNNYEPL--VQTCMTTLSSKIVNRCKRSLA 182
>At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit /
TCP-1-alpha / chaperonin (CCT1) identical to
SWISS-PROT:P28769- T-complex protein 1, alpha subunit
(TCP-1-alpha) [Arabidopsis thaliana]
Length = 545
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERAL-D 178
EHPAAK++V +++QD EVGDGT V++++ R + + I GY A+ +
Sbjct: 71 EHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRE 130
Query: 179 KCLEILPSLI 208
C I L+
Sbjct: 131 SCKYIEEKLV 140
>At3g18190.1 68416.m02314 chaperonin, putative similar to
SWISS-PROT:P50991- T-complex protein 1, delta subunit
(TCP-1-delta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 536
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +2
Query: 8 PAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCL 187
PAAK++V S+ QD+ GDGT V+V++G G+ + I+D +A K +
Sbjct: 82 PAAKMLVELSKSQDSAAGDGTTTVVVIAGALLKECQSLLTNGIHPTVISDSLHKACGKAI 141
Query: 188 EILPSL 205
+IL ++
Sbjct: 142 DILTAM 147
>At5g20890.1 68418.m02481 chaperonin, putative similar to
SWISS-PROT:P78371- T-complex protein 1, beta subunit
(TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 527
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDK 181
++PAAK++V S++QD EVGDGT V+VL+G + I GY R +
Sbjct: 72 DNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTIIAGY-RMASE 130
Query: 182 CLE--ILPSLICNEIKDTKNIKEVTKVLLLLSC 274
C +L +I N+ K ++ K+ + C
Sbjct: 131 CARNALLKRVIDNKDNAEKFRSDLLKIAMTTLC 163
>At3g11830.1 68416.m01450 chaperonin, putative similar to
SWISS-PROT:P80313 T-complex protein 1, eta subunit
(TCP-1-eta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 557
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 5 HPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYER----A 172
HPAAK++V ++ QD+EVGDGT V++L+ GV + Y A
Sbjct: 76 HPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPFIEDGVHAQNLIRSYRTASTLA 135
Query: 173 LDKCLEILPSLICNEIKDTKNI 238
+ K E+ S+ +++ K +
Sbjct: 136 IAKVKELAVSIEGKSVEEKKGL 157
>At4g08640.1 68417.m01421 hypothetical protein low similarity to
chaperonin-containing-TCP1 theta subunit from
Tetrahymena pyriformis [GI:4959731], Homo sapiens
[SP|P50990]
Length = 171
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 352 TFNVDNVRVCKILGAGLLQSEVLSGMVFRREVEGDV-SSAKNAKI 483
T N+D+V V KILG +S V+ G+VF+ + G++ KNAK+
Sbjct: 2 TMNIDDVHVAKILGVDSRKSCVVCGIVFKSDDVGNIRHPLKNAKV 46
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +3
Query: 564 NFSKGEESLLEKQIKDISDSGVKVIVAGAKFGDMGL 671
NF K +E++LE +KDI+ S VKVIV+ + +M L
Sbjct: 48 NFGKSKEAMLETLVKDIAFSNVKVIVSRSSICEMTL 83
>At3g32940.1 68416.m04174 expressed protein
Length = 607
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = -3
Query: 679 RSVRPISPNLAPATITFTPESEISLICFSSKDSSPLLKFSNSSAL 545
+SVRP++PN +P + P +EI I F S SS + ++ + S+L
Sbjct: 397 QSVRPLAPNFSPHPVAHQPGTEIPSIPFPSA-SSLIAEYGSGSSL 440
>At5g05680.1 68418.m00625 nuclear pore complex protein-related
contains weak similarity to Nuclear pore complex protein
Nup88 (Nucleoporin Nup88) (88 kDa nuclear pore complex
protein) (Swiss-Prot:Q99567) [Homo sapiens]
Length = 810
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 241 RSYKG-IVAAIMSKQYGHEQFISELVTKACVAILPEKTTFNVDNVRVCKILGAGLLQSE 414
+S+KG +VAA KQY + I + + L + + N DN + KI+ + L E
Sbjct: 748 KSHKGTVVAASQKKQYSKKNLIQDTQMSQLQSTLAKLSLMNSDNSKKVKIVESALKSQE 806
>At3g02530.1 68416.m00241 chaperonin, putative similar to
SWISS-PROT:P80317- T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/86 (22%), Positives = 36/86 (41%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDK 181
++P A ++ + QD GDGT ++ G G+ + DG+E A
Sbjct: 69 QNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRA 128
Query: 182 CLEILPSLICNEIKDTKNIKEVTKVL 259
L+ L + + + KE+ K++
Sbjct: 129 TLQFLDTFKTPVVMGDEPDKEILKMV 154
>At5g16070.1 68418.m01878 chaperonin, putative similar to
SWISS-PROT:P80317 T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/86 (22%), Positives = 36/86 (41%)
Frame = +2
Query: 2 EHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDK 181
++P A ++ + QD GDGT ++ G G+ + DG+E A
Sbjct: 69 QNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRA 128
Query: 182 CLEILPSLICNEIKDTKNIKEVTKVL 259
L+ L + + + KE+ K++
Sbjct: 129 TLQFLDNFKTPVVMGDEVDKEILKMV 154
>At2g46600.1 68415.m05812 calcium-binding protein, putative similar
to EF-hand Ca2+-binding protein CCD1 [Triticum aestivum]
GI:9255753
Length = 135
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 268 IMSKQYGHEQFISELVTKACVAILPEKTTFNVDNV-RVCKILGAGLLQSEVLSGMVFRRE 444
+M+++ E+F+SEL + PE+ +++ R ILG + E GMV +
Sbjct: 28 VMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGD 87
Query: 445 VEGD 456
++GD
Sbjct: 88 LDGD 91
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = -3
Query: 724 IWN*DGTAHNNGIYS-RSVRPI-SPNLAPATITFTPESEISLICFSSKDSSPLLKFSNSS 551
+WN D G S RS SP ++ PE+++S + ++S +++ SS
Sbjct: 469 LWNNDAFPSRKGAKSSRSFEYFHSPGVSAVAAWTQPETKVSKVAGDDEESRRVMRKIQSS 528
Query: 550 ALLMRTVPLVSVW 512
L R+ + + W
Sbjct: 529 GRLSRSCRVTATW 541
>At5g41910.1 68418.m05102 RNA polymerase II mediator complex
protein-related similar to SP|P87310 RNA polymerase II
mediator complex protein nut2 {Schizosaccharomyces
pombe}
Length = 186
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +2
Query: 125 RLGVTTSEIADGYERALDKCLEILPSLICNEIKDTKNIKEVTKVLLLLSCL 277
RL E+ D + DKC +P + N I D KN E TK +L +C+
Sbjct: 70 RLNSLVMEL-DNMAKLSDKCNIQVPIEVLNLIDDGKNPDEFTKDVLNKNCI 119
>At4g11050.1 68417.m01796 endo-1,4-beta-glucanase, putative /
cellulase, putative similar to endo-beta-1,4-glucanase
GI:4972236 from [Fragaria x ananassa]
Length = 626
Score = 27.9 bits (59), Expect = 7.6
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 161 YERALDKCLEILPSLICNEIKDTKNIKEVTKVLLLLSCLNNM--VMNNSFLSLSRKPVLQ 334
+ER K + + SL+ K TKNIK+ L+ NNM V + SFL+ L
Sbjct: 304 FERYQQKAEQFMCSLLG---KSTKNIKKTPGGLIFRQSWNNMQFVTSASFLATVYSDYLS 360
Query: 335 YYQKKL 352
Y ++ L
Sbjct: 361 YSKRDL 366
>At1g11050.1 68414.m01266 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 625
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 152 ADGYERALDKCLEILPSLICNEIKDTKNIKEVTKVLLLLSCLNNMVMNNSFLSLS 316
AD L ++ + + +K T N + + + +SCLNN+ S LSLS
Sbjct: 51 ADSKNSCCQSLLTLIGIPLAHRLKQTSNFR-LPNLATSISCLNNLQTKLSSLSLS 104
>At5g08300.1 68418.m00977 succinyl-CoA ligase [GDP-forming]
alpha-chain, mitochondrial, putative / succinyl-CoA
synthetase, alpha chain, putative / SCS-alpha, putative
identical to SP|P53586 Succinyl-CoA ligase [GDP-forming]
alpha-chain, mitochondrial precursor (EC 6.2.1.4)
(Succinyl-CoA synthetase, alpha chain) (SCS-alpha)
{Arabidopsis thaliana}; strong similarity to SP|P13086
Succinyl-CoA ligase [GDP-forming] alpha-chain,
mitochondrial precursor {Rattus norvegicus}; contains
Pfam profiles PF00549: CoA-ligase, PF02629: CoA binding
domain
Length = 347
Score = 27.5 bits (58), Expect = 10.0
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 576 GEESLLEKQIKDISDSGVKVIVAGAKFG 659
G + + +IK ++D+GVKV+ + AK G
Sbjct: 305 GGKGTAQDKIKSLNDAGVKVVESPAKIG 332
>At1g77450.1 68414.m09019 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
similar to GRAB1 protein GB:CAA09371, a novel member of
the NAC domain family
Length = 253
Score = 27.5 bits (58), Expect = 10.0
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = -3
Query: 730 CRIWN*DGTAHNNGIYSRSVRPISPNLAPATITFTPESEISLICFSSKDSSPLLKFSN 557
CRI+N G+ + I L P T T PES LI S + SP SN
Sbjct: 155 CRIYN------KKGVIEKRRSDIEDGLKPVTDTCPPESVARLISGSEQAVSPEFTCSN 206
>At1g20570.1 68414.m02565 tubulin family protein
Length = 976
Score = 27.5 bits (58), Expect = 10.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 218 IKDTKNIKEVTKVLLLLSCLNNMVMNNSFLSLSR 319
+K+ KN+ KVL L C N+V++ S + L R
Sbjct: 473 VKEEKNVLAAEKVLQGLFCHENLVVSASKMDLER 506
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,868,009
Number of Sequences: 28952
Number of extensions: 284215
Number of successful extensions: 827
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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