Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30256
         (844 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2QQH7 Cluster: Similarity to hypothetical transaminase...    38   0.32 
UniRef50_Q8I541 Cluster: Putative uncharacterized protein; n=1; ...    37   0.73 
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    36   1.7  
UniRef50_UPI00004990AD Cluster: conserved hypothetical protein; ...    35   2.2  
UniRef50_A2FVP5 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  
UniRef50_Q7QWL9 Cluster: GLP_762_28007_25179; n=1; Giardia lambl...    34   5.1  
UniRef50_Q5BWU9 Cluster: SJCHGC03814 protein; n=1; Schistosoma j...    34   5.1  
UniRef50_UPI0001555BB1 Cluster: PREDICTED: similar to ALMS1, par...    33   9.0  
UniRef50_Q6BUQ1 Cluster: Debaryomyces hansenii chromosome C of s...    33   9.0  

>UniRef50_A2QQH7 Cluster: Similarity to hypothetical transaminase
           DR1350 - Deinococcus radiodurans; n=1; Aspergillus
           niger|Rep: Similarity to hypothetical transaminase
           DR1350 - Deinococcus radiodurans - Aspergillus niger
          Length = 378

 Score = 37.9 bits (84), Expect = 0.32
 Identities = 22/78 (28%), Positives = 35/78 (44%)
 Frame = -2

Query: 774 FSGSVSESGGRFCESTALVRASVSNTSGLIPESSPTR*GNADIAFQGYQHR*EKEKNCPV 595
           F GS++E   RFC     ++AS S TSG+ P     +  ++ +    + H   +E   P+
Sbjct: 61  FGGSLAELLPRFCSRRGELKASASGTSGMRPIMEREKRTSSPLHLSLFWHTLRRESKVPI 120

Query: 594 SMDGSYNFPPGRLHASAH 541
            M G  + P      S H
Sbjct: 121 VMVGCADCPASLSTRSRH 138


>UniRef50_Q8I541 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 349

 Score = 36.7 bits (81), Expect = 0.73
 Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
 Frame = -1

Query: 304 YNDFHRKILETFRVVRRSRHHISLIKLSRSCFDQTKATSSP-VILNLFFVAAHIKRFQNL 128
           YN ++ +      +  RS ++I ++  S  C D  +    P + LNLF++  H   ++ +
Sbjct: 193 YNQYNLQKYYLLNIQLRSINNIIILNESSLCHDMKRLLEEPNICLNLFYIDVH--NYKII 250

Query: 127 AAHKKKDKNYLLTTTHCINSLSKIFNIRNKLKYTIIFF 14
           + H   D    +   H I   +KIF +  K+  T  FF
Sbjct: 251 STHLNIDN---IEQVHSIIKENKIFYVIYKVLDTYTFF 285


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 35.5 bits (78), Expect = 1.7
 Identities = 26/71 (36%), Positives = 35/71 (49%)
 Frame = -2

Query: 813 P*TQPTGGFLPHLFSGSVSESGGRFCESTALVRASVSNTSGLIPESSPTR*GNADIAFQG 634
           P TQP   FL      S   S GRFCE+  L+   ++N+  L P   P R   A IAF+ 
Sbjct: 70  PKTQPMK-FLAGSSQSSRFRSDGRFCEALLLLGLVLANSLRLSPYELPNRPRVAGIAFRL 128

Query: 633 YQHR*EKEKNC 601
             +R E++  C
Sbjct: 129 PANRYEEKTVC 139


>UniRef50_UPI00004990AD Cluster: conserved hypothetical protein; n=2;
            Entamoeba histolytica HM-1:IMSS|Rep: conserved
            hypothetical protein - Entamoeba histolytica HM-1:IMSS
          Length = 955

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -1

Query: 136  QNLAAHKKKDKNYLLTTTHCINSLSKIFNIRNKLKYTIIFFC 11
            Q  A +++K++N L+TT H I    KI  + NK+ Y ++  C
Sbjct: 884  QQQAKYREKEENSLVTTLHMIAKNMKIIGVSNKIIYEVLEDC 925


>UniRef50_A2FVP5 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 858

 Score = 34.3 bits (75), Expect = 3.9
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
 Frame = -1

Query: 241 ISLIKLSRSCFDQTKATSSPV--ILNLFFVAAHIKRFQNLAAHKKKDKNYLLTTTHCINS 68
           I L K+ + C  Q  A  S +  IL+ F+V+  +  F +L  + +KD +Y ++     N 
Sbjct: 85  IQLTKIVQDCLTQPSAAISKIHRILHTFYVSGQMSIFADLLVNYQKDFHYCISRIE--NG 142

Query: 67  LSKIFN----IRNKLKYT 26
           L   FN    I NK K T
Sbjct: 143 LEIEFNEQMHINNKFKIT 160


>UniRef50_Q7QWL9 Cluster: GLP_762_28007_25179; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_762_28007_25179 - Giardia lamblia
           ATCC 50803
          Length = 942

 Score = 33.9 bits (74), Expect = 5.1
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = -1

Query: 256 RSRHHISLIKLSRSCFDQTKATSSPVILNLFFVAAHIKRFQNLAAHKKKDKNYLL--TTT 83
           RS+H +SLI    S FD TK  SS  I  L  + +      + AA +  D+  ++   TT
Sbjct: 71  RSKHGVSLINPLSSTFDSTKGDSSSYITTLSVLESGEHTTNSYAAARSLDRQGIMRGNTT 130

Query: 82  HCINSL 65
             +N++
Sbjct: 131 KTVNTI 136


>UniRef50_Q5BWU9 Cluster: SJCHGC03814 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC03814 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 238

 Score = 33.9 bits (74), Expect = 5.1
 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
 Frame = -1

Query: 268 RVVRRSR--HHI-SLIKLSRSCFDQTKATSSPVILNLFFVAAHIKRFQNLAAHKKKDKNY 98
           ++VR S   HH+ S+ K+S+SC    K   SPV +NL   +++ +   ++ ++K      
Sbjct: 104 KLVRNSNNNHHLASISKVSQSCSSFDKVILSPVSMNLKSSSSNKQLLLHIGSNKSFSSYK 163

Query: 97  LLTTTHCINSLSKIFNIRNKLK 32
           L   TH  +   +   + N LK
Sbjct: 164 LSNNTHISSCCKEYQYLANSLK 185


>UniRef50_UPI0001555BB1 Cluster: PREDICTED: similar to ALMS1,
           partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           similar to ALMS1, partial - Ornithorhynchus anatinus
          Length = 623

 Score = 33.1 bits (72), Expect = 9.0
 Identities = 20/51 (39%), Positives = 28/51 (54%)
 Frame = +1

Query: 634 ALKGYISVTLACR*ALGNQTGSIANTGPNKSSAFAESTTGFGNRPTEKMRQ 786
           A K   S+T A R     ++ S + + P K+   AES  GFG+ PTE+ RQ
Sbjct: 182 ASKRITSITFASR----RRSKSFSGSPPGKNPLAAESLGGFGSLPTEEERQ 228


>UniRef50_Q6BUQ1 Cluster: Debaryomyces hansenii chromosome C of
           strain CBS767 of Debaryomyces hansenii; n=1;
           Debaryomyces hansenii|Rep: Debaryomyces hansenii
           chromosome C of strain CBS767 of Debaryomyces hansenii -
           Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
          Length = 1661

 Score = 33.1 bits (72), Expect = 9.0
 Identities = 25/109 (22%), Positives = 48/109 (44%)
 Frame = -1

Query: 355 QNKYIQNS*YNF*YSLTYNDFHRKILETFRVVRRSRHHISLIKLSRSCFDQTKATSSPVI 176
           QN+Y  NS  +    LTY DF  K  +    + + +  + + KL+   +        P++
Sbjct: 57  QNRYTSNSSTD---ELTYPDF--KPWKDTTHLPKGKSEVEVEKLNNEAYLNKGYFEGPLV 111

Query: 175 LNLFFVAAHIKRFQNLAAHKKKDKNYLLTTTHCINSLSKIFNIRNKLKY 29
            N ++ A ++ +    ++    DK     + H +NS      + NK+KY
Sbjct: 112 ANEYYSARNLIQASLFSSSSNCDKVLKELSQHLVNSYRTRNEVINKIKY 160


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 830,805,196
Number of Sequences: 1657284
Number of extensions: 16880627
Number of successful extensions: 36542
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 35307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36535
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73783549980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)