Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30256
         (844 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   1.3  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    24   1.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    24   1.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    24   1.7  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    24   1.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.0  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   5.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   7.0  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 599 QYPWMVVTTFHQVDCMLRLIKAIKLKL 519
           QYP +VV+TF+ V  M  LI   + KL
Sbjct: 37  QYPRIVVSTFNIVFYMYTLILEERFKL 63


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 514 NVNFNFIALMSRSMQSTWWKVVTTIHGYWAIL 609
           +VNF++++  SR +    W +  T+   WA++
Sbjct: 201 SVNFHYLSPQSRGLFHRGWSMSGTMLVPWALM 232


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 514 NVNFNFIALMSRSMQSTWWKVVTTIHGYWAIL 609
           +VNF++++  SR +    W +  T+   WA++
Sbjct: 201 SVNFHYLSPQSRGLFHRGWSMSGTMLVPWALM 232


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 514 NVNFNFIALMSRSMQSTWWKVVTTIHGYWAIL 609
           +VNF++++  SR +    W +  T+   WA++
Sbjct: 201 SVNFHYLSPQSRGLFHRGWSMSGTMLVPWALM 232


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 514 NVNFNFIALMSRSMQSTWWKVVTTIHGYWAIL 609
           +VNF++++  SR +    W +  T+   WA++
Sbjct: 201 SVNFHYLSPQSRGLFHRGWSMSGTMLVPWALM 232


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 274 FQGFYGGSRCTLNYIKSYIKNSVCIYFVRQIKLDN 378
           F  FY  SR TL     Y K+ V   +V   ++DN
Sbjct: 103 FDLFYYPSRQTLYTPVQYFKDLVAEAYVSPFRIDN 137


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = +1

Query: 514 NVNFNFIALMSRSMQSTWWKVVTTIHGYWAIL 609
           + NF++++  SR +    W +  T+   WA++
Sbjct: 201 SANFHYLSPQSRGLFHRGWSMSGTMLVPWALM 232


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 648 IAFQGYQHR*EKEKNCPVSMDGSYNFPPGRLH 553
           +A +  Q R  +EKN  V  +G  +F P ++H
Sbjct: 267 VAKEDIQVRFFEEKNGKVVWEGFGDFQPSQVH 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,654
Number of Sequences: 336
Number of extensions: 4497
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)