Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30256
         (844 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014135-147|AAS64612.1| 1579|Drosophila melanogaster CG11148-PC...    30   4.6  
AE014135-146|AAS64611.1| 1579|Drosophila melanogaster CG11148-PB...    30   4.6  
AE014135-145|AAF59406.2| 1572|Drosophila melanogaster CG11148-PA...    30   4.6  
AE013599-3301|AAF46781.2|  408|Drosophila melanogaster CG13495-P...    30   4.6  

>AE014135-147|AAS64612.1| 1579|Drosophila melanogaster CG11148-PC,
            isoform C protein.
          Length = 1579

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
 Frame = -1

Query: 355  QNKYIQNS*YNF*YSLTYNDFHRKI--LETFRVVRRSRHHISLIKLSRSCFDQTKATSSP 182
            Q++YIQ+  Y     L+ N+  +++  +E   VVRR    + L+ L          ++S 
Sbjct: 722  QDQYIQHQEYQILAELSKNECFQRLSAVEQETVVRRK---VQLLGLPEYLISLNGLSNSL 778

Query: 181  VILNLFFVAAHIKRFQNLAAHKKKDKNYLLTTTHCINSLSKIFNIRN 41
             +LN     A  + ++ +  H KKD+ ++   T    S+  + +  N
Sbjct: 779  SVLN---PVAGRQLYRAVVEHAKKDQQHIFANTEQQRSVGNLLDANN 822


>AE014135-146|AAS64611.1| 1579|Drosophila melanogaster CG11148-PB,
            isoform B protein.
          Length = 1579

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
 Frame = -1

Query: 355  QNKYIQNS*YNF*YSLTYNDFHRKI--LETFRVVRRSRHHISLIKLSRSCFDQTKATSSP 182
            Q++YIQ+  Y     L+ N+  +++  +E   VVRR    + L+ L          ++S 
Sbjct: 722  QDQYIQHQEYQILAELSKNECFQRLSAVEQETVVRRK---VQLLGLPEYLISLNGLSNSL 778

Query: 181  VILNLFFVAAHIKRFQNLAAHKKKDKNYLLTTTHCINSLSKIFNIRN 41
             +LN     A  + ++ +  H KKD+ ++   T    S+  + +  N
Sbjct: 779  SVLN---PVAGRQLYRAVVEHAKKDQQHIFANTEQQRSVGNLLDANN 822


>AE014135-145|AAF59406.2| 1572|Drosophila melanogaster CG11148-PA,
            isoform A protein.
          Length = 1572

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
 Frame = -1

Query: 355  QNKYIQNS*YNF*YSLTYNDFHRKI--LETFRVVRRSRHHISLIKLSRSCFDQTKATSSP 182
            Q++YIQ+  Y     L+ N+  +++  +E   VVRR    + L+ L          ++S 
Sbjct: 715  QDQYIQHQEYQILAELSKNECFQRLSAVEQETVVRRK---VQLLGLPEYLISLNGLSNSL 771

Query: 181  VILNLFFVAAHIKRFQNLAAHKKKDKNYLLTTTHCINSLSKIFNIRN 41
             +LN     A  + ++ +  H KKD+ ++   T    S+  + +  N
Sbjct: 772  SVLN---PVAGRQLYRAVVEHAKKDQQHIFANTEQQRSVGNLLDANN 815


>AE013599-3301|AAF46781.2|  408|Drosophila melanogaster CG13495-PA
           protein.
          Length = 408

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = -1

Query: 310 LTYNDFH-RKILETFRVVRR-SRHHISLIKLSRSCFDQTKATSSPVILNLFFVAAHI 146
           L  N  H RK  + ++ +R  +  H+  ++L+R  FD     ++ V +N+F  A +I
Sbjct: 212 LAINALHGRKARKKWKALRSVAAMHLKTLRLARRIFDMFDIANATVFINMFMTAINI 268


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,493,688
Number of Sequences: 53049
Number of extensions: 802145
Number of successful extensions: 1595
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1595
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)