Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30255
(714 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 42 9e-05
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 42 1e-04
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 40 3e-04
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 40 5e-04
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 38 0.001
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 36 0.006
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 35 0.010
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 35 0.013
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 35 0.013
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 35 0.013
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 35 0.013
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 35 0.013
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 35 0.013
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 34 0.018
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 33 0.031
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 33 0.031
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 33 0.041
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 33 0.054
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 32 0.094
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 32 0.094
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 31 0.12
SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces p... 31 0.12
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 31 0.16
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ... 31 0.16
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 31 0.16
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 31 0.16
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 31 0.22
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 31 0.22
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 31 0.22
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 30 0.29
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 30 0.29
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 30 0.29
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 30 0.29
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 30 0.29
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 30 0.29
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 30 0.38
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 30 0.38
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 30 0.38
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 29 0.50
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 29 0.66
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 29 0.66
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 29 0.66
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 29 0.87
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 29 0.87
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 29 0.87
SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4 |Schizosacc... 29 0.87
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 29 0.87
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 28 1.2
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 28 1.2
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 28 1.2
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 28 1.5
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 28 1.5
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 28 1.5
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 1.5
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 2.0
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 27 2.0
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 27 2.0
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 27 2.0
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 27 2.0
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 27 2.0
SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual 27 2.7
SPAC1006.02 |||WD repeat protein, human GNB1L family|Schizosacch... 27 2.7
SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr 1|... 27 2.7
SPBC32H8.09 |||WD repeat protein, human WDR8 family|Schizosaccha... 27 2.7
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 27 3.5
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 27 3.5
SPCC63.06 |||human WDR89 family WD repeat protein|Schizosaccharo... 27 3.5
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 27 3.5
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 27 3.5
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 27 3.5
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 26 4.7
SPCC965.14c |||cytosine deaminase |Schizosaccharomyces pombe|chr... 26 4.7
SPAC22A12.01c |pso2|snm1, SPAC56F8.17c, snm1|DNA 5' exonuclease ... 26 4.7
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 4.7
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 26 4.7
SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr 1|||M... 26 4.7
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 26 6.1
SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr... 26 6.1
SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family |Schizosa... 26 6.1
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 26 6.1
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 26 6.1
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 26 6.1
SPAC1A6.02 ||SPAC23C4.21|WD repeat protein, human WDR55 family|S... 26 6.1
SPAC13G6.08 |||Cdc20/Fizzy family WD repeat protein|Schizosaccha... 25 8.1
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 25 8.1
SPBC354.14c |vac8||vacuolar protein Vac8|Schizosaccharomyces pom... 25 8.1
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 25 8.1
SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomy... 25 8.1
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 41.9 bits (94), Expect = 9e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
G + V FSPDG+YLV+GS+D +++W LQ
Sbjct: 456 GHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQ 488
Score = 36.7 bits (81), Expect = 0.003
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 429 HVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
+V FSPDG+YL TG D + +W++ +++ R+
Sbjct: 336 YVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRL 371
Score = 34.7 bits (76), Expect = 0.013
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVW 506
V FSPDGQ++ GS+D V+ +W
Sbjct: 420 VTTVMFSPDGQFIAAGSLDKVIRIW 444
Score = 31.1 bits (67), Expect = 0.16
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWN 509
G K + SPDG+++++GS D ++ W+
Sbjct: 510 GHKDFILSVTVSPDGKWIISGSKDRTIQFWS 540
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
G + + FS DG+ LV+GS D V +W+++
Sbjct: 374 GHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVE 406
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 572 EEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRKTG 691
++ V ++ F+ D +AAGS D I++W S V++ G
Sbjct: 417 DDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHG 456
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 41.5 bits (93), Expect = 1e-04
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICVIR 548
G K V FSPD L++GS+D ++VW LQ +SV + I+
Sbjct: 482 GHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIK 525
Score = 39.1 bits (87), Expect = 6e-04
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3
Query: 429 HVECARFSPDGQYLVTGSVDGVVEVWNLQREK 524
+V FSPDG+YLVTG+ D +++W+L +K
Sbjct: 362 YVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQK 393
Score = 35.9 bits (79), Expect = 0.006
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2
Query: 572 EEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRKTGPSSLK 706
+E+V S+AF+ DS L +GS D IKVW++ + R G S++K
Sbjct: 484 KESVYSIAFSPDSSILLSGSLDKTIKVWEL---QATRSVGLSAIK 525
Score = 32.7 bits (71), Expect = 0.054
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQ 679
V ++AF+ D L G+ D +IK+W +ST KV+
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVR 395
Score = 30.7 bits (66), Expect = 0.22
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +3
Query: 405 IIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
I+K ++ V SP+ Q++ GS+D ++ VW++
Sbjct: 437 ILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSV 472
Score = 29.9 bits (64), Expect = 0.38
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 387 PTQLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRIC 539
P + K G V SPD ++ ++GS D ++ W+LQ +S C
Sbjct: 526 PEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTC 576
Score = 28.7 bits (61), Expect = 0.87
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 572 EEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
E+ + SL F+ + + +GS D ++W V TG+
Sbjct: 402 EQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQ 435
Score = 28.7 bits (61), Expect = 0.87
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
G K+ V FSPDG+ +GS D +W++
Sbjct: 578 GHKNSVISVCFSPDGRQFASGSGDLRARIWSI 609
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
VLS+A + DS +GS D ++ W + TG+
Sbjct: 541 VLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQ 571
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 40.3 bits (90), Expect = 3e-04
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
G S V+C F P+ Y++TGS D +W++ R SVR+
Sbjct: 461 GHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRV 500
Score = 31.5 bits (68), Expect = 0.12
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +3
Query: 315 LPPGTTIDLFRGKAAIRDQED--DLCP-TQLSKIIKFG---QKSHVECARFSPDGQYLVT 476
LPP +D+ A++D L P L + + +++ CA FSPD +
Sbjct: 282 LPPHKGVDILSEVEAVKDWSKRLHLGPRASLPSVCMYTFHHTNNNMNCAEFSPDSTMIAC 341
Query: 477 GSVDGVVEVWNLQREK 524
G + + +W+++ +K
Sbjct: 342 GFQESYIRLWSIKADK 357
Score = 30.7 bits (66), Expect = 0.22
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 575 EAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
+ V ++A A D T+A+ ++G I +W + TG+
Sbjct: 506 QPVTAVAIAPDGHTMASADSEGLIHLWDIGTGR 538
Score = 28.7 bits (61), Expect = 0.87
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKV 661
+ SL+F+R+S L +G +D ++ W V
Sbjct: 550 IYSLSFSRESTVLVSGGSDCTVRAWDV 576
Score = 26.2 bits (55), Expect = 4.7
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +3
Query: 447 FSPDGQYLVTGSVDGVVEVWNLQREKSV 530
FSPD +YL++ S D +W++ + ++
Sbjct: 387 FSPDNKYLLSCSEDASARLWSVDTKTAL 414
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 39.5 bits (88), Expect = 5e-04
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICVIRLMMSTCAW 572
G S + F P G +L++GS D V+VWN+++ +VR + + W
Sbjct: 187 GHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGW 238
Score = 33.9 bits (74), Expect = 0.023
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 450 SPDGQYLVTGSVDGVVEVWNLQREKSVRICV 542
S DG +L TG+ D V +WNL E +V C+
Sbjct: 373 SEDGVWLATGAKDNTVRLWNLNIEDNVYKCI 403
Score = 29.1 bits (62), Expect = 0.66
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVR 533
G + V F+P + L +GS D + +WN+ ++ V+
Sbjct: 505 GHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQ 543
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTGKV 676
V ++ ++D +A+ S D IK+W STG+V
Sbjct: 468 VNAIQVSKDGRIIASASQDKTIKLWDSSTGEV 499
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 578 AVLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
A+L L + + + + DG +KVW +S+G+
Sbjct: 551 AILKLIYISQGTQVVSAAADGLVKVWSLSSGE 582
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 456 DGQYLVTGSVDGVVEVW 506
DG LV+G D VV VW
Sbjct: 602 DGSLLVSGGADAVVSVW 618
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 37.9 bits (84), Expect = 0.001
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
G ++ V+C F P+ YL TGS D +W+++ +VR+
Sbjct: 485 GHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRV 524
Score = 32.3 bits (70), Expect = 0.071
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 399 SKIIKF-GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICV 542
S I+K+ G + + +FSP G Y T S D +W+++ +R+ V
Sbjct: 436 STIVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAAPLRVFV 484
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 35.9 bits (79), Expect = 0.006
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWN 509
V RFSP+GQYL +GS D VV +W+
Sbjct: 77 VTSVRFSPNGQYLASGSDDRVVIIWH 102
Score = 30.7 bits (66), Expect = 0.22
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 423 KSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
+SHV+ F P G+Y T S D ++VW +
Sbjct: 176 QSHVKGITFDPAGKYFATESDDRTIKVWRV 205
Score = 29.9 bits (64), Expect = 0.38
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
G + + PDG + TG +DG + +W+ +
Sbjct: 16 GHRLSIFSIHIHPDGSRIATGGLDGTIRIWSTE 48
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRK-TGP 694
V + F A S+D IKVW+VS +++ TGP
Sbjct: 179 VKGITFDPAGKYFATESDDRTIKVWRVSDFSIEKTITGP 217
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 35.1 bits (77), Expect = 0.010
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2
Query: 557 EYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRKTG 691
EY +L L DS A+ D I+VW V+TGKV R+ G
Sbjct: 51 EYAGHGHEILDLDLVYDSTKFASCGGDKFIQVWDVNTGKVDRRLG 95
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 34.7 bits (76), Expect = 0.013
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 414 FGQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
FG + V ARF P G Y +G +D + +WN+
Sbjct: 47 FGHTAEVLVARFDPSGSYFASGGMDRQILLWNV 79
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +2
Query: 572 EEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQ 679
E +L +A++R+S + AGS+D + VW +TG ++
Sbjct: 269 EHNLLGVAWSRNSRFVGAGSSDKNVYVWS-ATGDLR 303
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 34.7 bits (76), Expect = 0.013
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 414 FGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVR 533
FG +HV ++ G L G+ GV+ +W+++ KSVR
Sbjct: 163 FGATNHVTSVLWTGKGTQLAVGTDSGVIYIWDIESTKSVR 202
Score = 29.5 bits (63), Expect = 0.50
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 450 SPDGQYLVTGSVDGVVEVWNLQREK 524
SPDGQ +VTG+ D + W L +K
Sbjct: 388 SPDGQSIVTGAGDETLRFWKLFNKK 412
Score = 25.4 bits (53), Expect = 8.1
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +2
Query: 572 EEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRK 685
E+ + L + R LA+G ND + VW + + K
Sbjct: 249 EQEICGLQWDRSLGQLASGGNDNNLFVWDYRSSRPLHK 286
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 34.7 bits (76), Expect = 0.013
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 321 PGTTIDLFRGKAAIRDQEDDLCPTQLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVE 500
P T+ L G + D C TQ G + V C ++PD + TGS+D +
Sbjct: 144 PSTSSRLVTGSGDFTARLWD-CDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIR 202
Query: 501 VWN 509
W+
Sbjct: 203 FWD 205
Score = 31.1 bits (67), Expect = 0.16
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWN 509
G + V A FSPDG+ + T S D V +W+
Sbjct: 387 GHQKVVNHASFSPDGRCIATASFDSSVRLWD 417
Score = 31.1 bits (67), Expect = 0.16
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +3
Query: 399 SKIIKF---GQKSHVECARFSPDGQYLVTGSVDGVVEVWN 509
SK +KF G + V +SPDGQ + +G D V +W+
Sbjct: 462 SKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +2
Query: 572 EEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
++ V +F+ D +A S D +++W TGK
Sbjct: 389 QKVVNHASFSPDGRCIATASFDSSVRLWDGKTGK 422
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 34.7 bits (76), Expect = 0.013
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
G ++V F+P G LV+GS D V +WNLQ +R+
Sbjct: 136 GHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRM 175
Score = 34.3 bits (75), Expect = 0.018
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 414 FGQKSHVECARFSPDGQYLVTGSVDGVVEVWN 509
FG + V C SP+ +++ T S DG +++W+
Sbjct: 51 FGHEKSVTCVSVSPNKRWIATSSSDGTIKIWS 82
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Frame = +2
Query: 521 KIRKDLR-YQAHD---EYMCM---EEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQ 679
+I K +R Y++H EY + E++V ++ + + +A S+DG IK+W T +++
Sbjct: 30 QIHKRIRNYESHSGFSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLE 89
Score = 27.9 bits (59), Expect = 1.5
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +3
Query: 414 FGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVR 533
FG + +++ +YL + S D + +W+ ++ SVR
Sbjct: 93 FGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVR 132
Score = 25.8 bits (54), Expect = 6.1
Identities = 8/31 (25%), Positives = 21/31 (67%)
Frame = +3
Query: 444 RFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
+F+ + +YL+ +++ + +W+ +R + VRI
Sbjct: 230 QFTENRKYLLVSNLNSQIRLWDYRRNRVVRI 260
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 34.7 bits (76), Expect = 0.013
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 387 PTQLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRIC 539
PT+ + + G K V C G +L +G DGV+ +W + + V C
Sbjct: 368 PTRCTNVF-IGHKGRVRCLSVHVSGNWLASGGDDGVLRIWEVMTGRCVWKC 417
Score = 28.7 bits (61), Expect = 0.87
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 617 LAAGSNDGKIKVWKVSTGK 673
LA+G +DG +++W+V TG+
Sbjct: 394 LASGGDDGVLRIWEVMTGR 412
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 34.7 bits (76), Expect = 0.013
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 387 PTQLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICV--IRLMMS 560
P L+ +K G H RFS +G +L +G V+G V +W+L R+ R + S
Sbjct: 15 PEALTTTLKHG---HATSIRFSTNGYHLASGLVNGSVVIWDLSTFSVSRVLTGHTRAIQS 71
Query: 561 TCAWKKRC*AWLL 599
C W C +LL
Sbjct: 72 VC-WSS-CDRFLL 82
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 34.3 bits (75), Expect = 0.018
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +2
Query: 575 EAVLSLAFARDSDTLAAGSNDGKIKVWKVSTG 670
+A+ +L ++ D + G++DGKIKVW +++G
Sbjct: 340 DALSTLQYSSDGQRIITGADDGKIKVWDMNSG 371
Score = 33.5 bits (73), Expect = 0.031
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 420 QKSHVECA---RFSPDGQYLVTGSVDGVVEVWNLQREKSVRICVIRLMMSTCAWKKRC 584
Q+SH + ++S DGQ ++TG+ DG ++VW++ + C++ T A C
Sbjct: 335 QQSHYDALSTLQYSSDGQRIITGADDGKIKVWDM----NSGFCIVTFTQHTSAVSGLC 388
Score = 30.7 bits (66), Expect = 0.22
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
VLSLAF D + S DG++ W V GK
Sbjct: 512 VLSLAFHPDGKEVCVASLDGQLTFWNVQEGK 542
Score = 30.3 bits (65), Expect = 0.29
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 426 SHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
S V F PDG+ + S+DG + WN+Q K +
Sbjct: 510 SDVLSLAFHPDGKEVCVASLDGQLTFWNVQEGKQTSL 546
Score = 29.1 bits (62), Expect = 0.66
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 348 GKAAIRDQEDDLCPTQLSKIIKFGQK-SHVECARFSPDGQYLVTGSVDGVVEVWNLQREK 524
GK + D C I+ F Q S V FS G L + S+DG V W+L R +
Sbjct: 361 GKIKVWDMNSGFC------IVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYR 414
Query: 525 SVR 533
+ R
Sbjct: 415 NFR 417
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 414 FGQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
F Q S + CA F P LV G G+ ++ L
Sbjct: 251 FNQNSKLRCAAFHPTSNLLVVGFSSGLFGIYEL 283
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 572 EEAVLSLAFARDSDTLAAGSNDGKIKVWKVS 664
+ V+S F++D T+ S DG + VWK S
Sbjct: 190 KNTVVSGFFSKDQQTIYTVSKDGALFVWKYS 220
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVW 506
G K+ V FS D Q + T S DG + VW
Sbjct: 188 GHKNTVVSGFFSKDQQTIYTVSKDGALFVW 217
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 33.5 bits (73), Expect = 0.031
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 393 QLSKIIK--FGQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
Q KI++ +G + + FS G++LVT S+DG + W+L
Sbjct: 560 QTRKIVRELWGHSNRLTSFDFSDTGRWLVTASLDGTIRTWDL 601
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 447 FSPDGQYLVTGSVDGV-VEVW-NLQREKSVRICVIRL 551
F+P G YL T VD V + +W NL K V +RL
Sbjct: 621 FAPTGDYLATTHVDQVGISLWTNLSMFKHVSTKALRL 657
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 33.5 bits (73), Expect = 0.031
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWNLQ 515
+ A++ P G VTG DG+V+VW+L+
Sbjct: 549 INMAQWQPKGNLFVTGGSDGIVKVWDLR 576
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 402 KIIKFGQKSH--VECARFSPDGQYLVTGSVDGVVEVWNLQ 515
K+ + G+K + + FS +L TG+ D V+VW+++
Sbjct: 290 KLNQVGEKEYSTISDLCFSKGNLFLYTGAFDNAVKVWDME 329
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 33.1 bits (72), Expect = 0.041
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
G ++V F DG++L T S DG V+VW+++
Sbjct: 81 GHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMR 113
Score = 32.7 bits (71), Expect = 0.054
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQR 682
V ++AF D LA S DG +KVW + VQR
Sbjct: 86 VTAIAFHCDGKWLATSSEDGTVKVWDMRAPSVQR 119
Score = 32.7 bits (71), Expect = 0.054
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 435 ECARFSPDGQYLVTGSVDGVVEVWNLQREKSVR 533
+CA FS D YLVT S D V +W L +++R
Sbjct: 264 DCA-FSADSTYLVTASSDHVARLWELSSGETIR 295
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 396 LSKIIKF-GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
L ++KF + ++ SPD ++L T S D V +W+ +
Sbjct: 205 LQPVVKFQAHQRYITRCVLSPDVKHLATCSADATVNIWSTE 245
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 32.7 bits (71), Expect = 0.054
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 414 FGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKS 527
+G + + A SPD + T S DG V W++ ++K+
Sbjct: 312 YGHQRSITAATLSPDATHFYTASYDGTVLSWDIGKQKA 349
Score = 31.5 bits (68), Expect = 0.12
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 441 ARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
ARFSP G Y+ +G G V +W+ E +
Sbjct: 64 ARFSPSGYYVASGDNQGNVRIWDCAGEDKI 93
Score = 29.1 bits (62), Expect = 0.66
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWN 509
+ C +SPDG+YL G G V +++
Sbjct: 482 ITCLAYSPDGKYLACGDASGKVVLYD 507
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 31.9 bits (69), Expect = 0.094
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVR 533
G ++V C F P + +++ S D + VW+L R +V+
Sbjct: 254 GHFNNVSCCLFHPHQELILSASEDKTIRVWDLNRRTAVQ 292
Score = 31.5 bits (68), Expect = 0.12
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
G +V CA F P +V+ S+D V VW++
Sbjct: 135 GHSHYVMCAAFHPSEDLIVSASLDQTVRVWDI 166
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 31.9 bits (69), Expect = 0.094
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 411 KFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICVIRL-MMSTCAWKKRC* 587
+ G + + RFS +G + +GS G V+VWN V++ +S W C
Sbjct: 168 QIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQ 227
Query: 588 AW 593
AW
Sbjct: 228 AW 229
Score = 29.1 bits (62), Expect = 0.66
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 447 FSPDGQYLVTGSVDGVVEVWNLQR 518
+SP+G L T S D V++W+L++
Sbjct: 357 WSPNGYQLATSSADDTVKIWDLRK 380
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = +3
Query: 390 TQLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
T + +++ G + PDG + +G D + +W+L+ KS+ +
Sbjct: 296 TGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMV 344
Score = 27.9 bits (59), Expect = 1.5
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 575 EAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
E + S+A D +++G ND ++W + +GK
Sbjct: 308 EGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGK 340
Score = 26.2 bits (55), Expect = 4.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
G + V F P G YLV+ S D +W++
Sbjct: 263 GHLARVGRVAFHPSGDYLVSASFDTTWRLWDV 294
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 31.5 bits (68), Expect = 0.12
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWNLQ 515
+ C FS DG YL++ D + VW+L+
Sbjct: 301 ISCLSFSQDGNYLLSRGEDNALRVWDLR 328
Score = 26.6 bits (56), Expect = 3.5
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +3
Query: 366 DQEDDLCPTQL--SKIIKF-GQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
+ EDD+ + S I F G V F +G TGS+D + W+L
Sbjct: 67 ENEDDITDVGVPGSHEIMFPGHSKIVTTTTFDKNGSRFYTGSLDNTIHCWDL 118
>SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.12
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 426 SHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
S+ C FSPD ++L G D + +W+ Q
Sbjct: 195 SNCFCIEFSPDNRHLAIGGADAITSLWDPQ 224
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 31.1 bits (67), Expect = 0.16
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 593 AFARDSDTLAAGSNDGKIKVWKVSTGKVQR 682
+F D + +G NDG +K+W V TGK+ R
Sbjct: 634 SFVSDEHKIISG-NDGSVKLWDVRTGKLLR 662
Score = 30.7 bits (66), Expect = 0.22
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 611 DTLAAGSNDGKIKVWKVSTGK 673
D L +GS D I++W+VSTG+
Sbjct: 518 DILVSGSYDSSIRIWRVSTGE 538
Score = 29.9 bits (64), Expect = 0.38
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 468 LVTGSVDGVVEVWNLQREKSVRI 536
LV+GS+D V VWN+++ K I
Sbjct: 404 LVSGSIDKTVRVWNIEKAKCTHI 426
Score = 27.5 bits (58), Expect = 2.0
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 339 LFRGKAAIRDQEDDLCPTQLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQR 518
+FRG +I + L P S++I+ G VE PD Y+V+GS D + VW L +
Sbjct: 426 IFRGHISIIRCLEILVP---SRLIRHG----VEIVE--PDQPYIVSGSRDHTLRVWKLPK 476
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTG 670
+ S+ + + + +GS D I+VW +STG
Sbjct: 550 IYSVLYEPERNICISGSMDKSIRVWDLSTG 579
Score = 25.8 bits (54), Expect = 6.1
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 617 LAAGSNDGKIKVWKVSTGK 673
L +GS D I++W ++TGK
Sbjct: 602 LISGSADSTIRIWDLNTGK 620
>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 31.1 bits (67), Expect = 0.16
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
G + ++ C F+ G L++GS+D +++W++
Sbjct: 99 GHEHNIPCITFNSSGTLLLSGSIDRSLQIWDI 130
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 31.1 bits (67), Expect = 0.16
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 539 RYQAHDEYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVS 664
++QAH EY + SL F+ TLA S D +KVW ++
Sbjct: 327 QFQAHSEY------ITSLDFSHPFGTLATASTDKTVKVWDMA 362
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQRE 521
G +V C ++ TGS+D V +WNL +
Sbjct: 372 GHSDYVSCLAIQDS--FIATGSMDTTVRLWNLDND 404
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
V +LA + D D L G++D ++ W + TG+
Sbjct: 438 VTALALSSD-DVLITGADDKTVRQWDIVTGR 467
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 31.1 bits (67), Expect = 0.16
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
G S V SPD + +V+GS D +++WN+
Sbjct: 103 GHTSDVLSVSISPDNRQVVSGSRDKTIKIWNI 134
Score = 30.7 bits (66), Expect = 0.22
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 414 FGQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
+G +V SPDG +G DG + +W+L
Sbjct: 189 YGHTGYVSAVTISPDGSLCASGGRDGTLMLWDL 221
Score = 29.5 bits (63), Expect = 0.50
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 420 QKSHVECAR--FSPDGQYLVTGSVDGVVEVWNLQR 518
+ S EC +SPDGQ L +G D ++ VW + +
Sbjct: 280 KSSEPECISLTWSPDGQTLFSGWTDNLIRVWQVTK 314
Score = 28.7 bits (61), Expect = 0.87
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 417 GQKSHVECARFSP--DGQYLVTGSVDGVVEVWNLQ 515
G V C RFSP D V+ D V+VW+L+
Sbjct: 146 GHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLE 180
Score = 27.5 bits (58), Expect = 2.0
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKV 661
VLS++ + D+ + +GS D IK+W +
Sbjct: 108 VLSVSISPDNRQVVSGSRDKTIKIWNI 134
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 30.7 bits (66), Expect = 0.22
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 438 CARFSPDGQYLVTGSVDGVVEVWNLQREKSVRIC 539
C +SPDG+++ G D +V +++ K V C
Sbjct: 369 CVTWSPDGKFIAIGGKDDLVSIYSFPLRKLVARC 402
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 30.7 bits (66), Expect = 0.22
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWNLQREK 524
V+C D + VTGS +GV+ +W++QR+K
Sbjct: 347 VDCVAMI-DEDHFVTGSDNGVIALWSVQRKK 376
Score = 30.3 bits (65), Expect = 0.29
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTG 670
+ SLA S+ A+GS DG I++WK++ G
Sbjct: 414 ITSLAAIPYSNLFASGSWDGNIRLWKIAEG 443
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
Frame = +3
Query: 417 GQKSHVE---CARFSPDGQYLVTGSVD 488
G+ HV+ C S DG+++VTG +D
Sbjct: 203 GENDHVKEITCLAISNDGRWIVTGGLD 229
Score = 25.4 bits (53), Expect = 8.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 575 EAVLSLAFARDSDTLAAGSNDGKIKVWKV 661
+AV+ LA R ++ + + S D IKVW +
Sbjct: 251 DAVMGLAMRRGTNEMFSCSADRSIKVWSL 279
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 30.7 bits (66), Expect = 0.22
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
G V C ++ DG +L+TGS D W++++ K++ +
Sbjct: 104 GHAGFVSCCKYVDDG-HLLTGSGDKTCMFWDIEQAKAISV 142
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 450 SPDGQYLVTGSVDGVVEVWNLQREKSVRIC-VIRLMMSTCAW 572
S DG+YL++ S + V+ VW+L V + + TCA+
Sbjct: 30 STDGKYLLSASTNDVLLVWDLHTSNKVAFFEAPSVWIMTCAF 71
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWN 509
G ++ + + DG L TGS D V +W+
Sbjct: 272 GHENRISSLALTSDGTMLATGSWDECVRLWS 302
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 572 EEAVLSLAFARDSDTLAAGSNDGKIKVWKVS 664
E + SLA D LA GS D +++W S
Sbjct: 274 ENRISSLALTSDGTMLATGSWDECVRLWSSS 304
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 30.3 bits (65), Expect = 0.29
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVW-KVSTGK 673
V +LAF+ + +TLA+ NDG + +W K+S+ +
Sbjct: 470 VWALAFSPNGNTLASADNDGNVFLWIKISSNE 501
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVW 506
G ++ V+C +S +G YL T S D V +W
Sbjct: 376 GHENEVKCIAWSCNGNYLATCSRDKSVWIW 405
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 587 SLAFARDSDTLAAGSNDGKIKVW 655
SL + RD D L +G +DG+ +VW
Sbjct: 584 SLEYLRD-DRLLSGGDDGECRVW 605
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 30.3 bits (65), Expect = 0.29
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 444 RFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
+F P Q L T DGVV W++Q K +R+
Sbjct: 240 KFHPIHQTLATAGGDGVVAFWDIQVRKRLRV 270
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 30.3 bits (65), Expect = 0.29
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 614 TLAAGSNDGKIKVWKVSTGKVQ 679
T +GS+D +KVW +STG VQ
Sbjct: 138 TFLSGSDDKTVKVWDLSTGAVQ 159
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 30.3 bits (65), Expect = 0.29
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQR 682
VLS+ ++RD +A+GS D KV+ + TG+ Q+
Sbjct: 77 VLSVNWSRDGTKVASGSVDKSAKVFDIQTGQNQQ 110
Score = 29.9 bits (64), Expect = 0.38
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 515 TGKIRKDLRYQAHDEYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKV-STGK 673
TG ++KD+ E +++ LAF+ ++ LAA S D K+++++V +TG+
Sbjct: 16 TGDLKKDVEVAQPPE-----DSISDLAFSPQAEYLAASSWDSKVRIYEVQATGQ 64
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 30.3 bits (65), Expect = 0.29
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 387 PTQLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
P L ++I G V C P Q+ TG+ D +++W+L
Sbjct: 152 PWTLMRVIS-GHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDL 192
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 393 QLSKIIKF--GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
+ +K+I+ G S V + P LVT D V VW+++ ++V +
Sbjct: 235 ETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHV 284
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
G KS V +VTGS+D + +W+L K++
Sbjct: 287 GHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTL 324
Score = 25.4 bits (53), Expect = 8.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 572 EEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
+ V SLA + GS D I++W ++ GK
Sbjct: 289 KSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGK 322
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 30.3 bits (65), Expect = 0.29
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 387 PTQLSKIIKF-GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
P+ + ++K + V + DG+Y+VT D +++VW+L+ K +
Sbjct: 252 PSSTTPLVKMLTHRGPVRDLAVNRDGRYMVTAGADSLLKVWDLRTYKEL 300
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 29.9 bits (64), Expect = 0.38
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICVIRLMMSTCAW 572
G V R+SPD +YL++ S D V +W+ + +R +S C W
Sbjct: 253 GHIDTVAYIRWSPDDRYLLSCSCDKSVILWDAFTGEKLRDYKHGFSVSCCCW 304
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWNLQRE 521
V C + PDG +TGS D + W+L E
Sbjct: 299 VSCCCWLPDGLSFITGSPDCHITHWSLNGE 328
Score = 26.2 bits (55), Expect = 4.7
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 602 RDSDTLAAGSNDGKIKVWKVSTGKV 676
+D + +GS D KI++W +GK+
Sbjct: 438 KDDTFVLSGSEDDKIRIWHRESGKL 462
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 29.9 bits (64), Expect = 0.38
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWN 509
+ R++PDG+ L+TGS G +WN
Sbjct: 84 INVVRWTPDGRRLLTGSSTGEFTLWN 109
Score = 28.7 bits (61), Expect = 0.87
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVW--NLQREKSVR 533
V CA +S DG++L++G G+V+ + NL K V+
Sbjct: 126 VRCAEWSTDGRWLISGDGGGMVKYFEPNLNNVKIVQ 161
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 402 KIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWN 509
KI++ + V FSP+ VT S DG ++VWN
Sbjct: 158 KIVQ-AHEMEVRDVAFSPNDSKFVTASDDGSLKVWN 192
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 572 EEAVLSLAFARDSDTLAAGSNDGKIKVW 655
E V +AF+ + S+DG +KVW
Sbjct: 164 EMEVRDVAFSPNDSKFVTASDDGSLKVW 191
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 29.9 bits (64), Expect = 0.38
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 617 LAAGSNDGKIKVWKVSTGKV 676
LAAG NDG I +W + +GKV
Sbjct: 161 LAAGCNDGSIWMWSLPSGKV 180
Score = 29.5 bits (63), Expect = 0.50
Identities = 9/33 (27%), Positives = 23/33 (69%)
Frame = +2
Query: 572 EEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTG 670
+++++++ ++ D +A G D ++++WK STG
Sbjct: 104 KDSIVAIDWSFDGTYIATGGMDSQVRLWKSSTG 136
Score = 28.7 bits (61), Expect = 0.87
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVW 506
G K + +S DG Y+ TG +D V +W
Sbjct: 102 GHKDSIVAIDWSFDGTYIATGGMDSQVRLW 131
Score = 26.2 bits (55), Expect = 4.7
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
G + + C +PDG+ +VTGS D + V++ +
Sbjct: 366 GHQEPILCMAITPDGKRVVTGSDDTELLVFDCE 398
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 453 PDGQYLVTGSVDGVVEVWNLQREKSVRI 536
P G +L G DG + +W+L K V++
Sbjct: 156 PKGLFLAAGCNDGSIWMWSLPSGKVVQV 183
Score = 25.4 bits (53), Expect = 8.1
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = +3
Query: 420 QKSHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
+++ ++C +F P+ YL+T D V+ W+++
Sbjct: 326 EQAVIDC-KFLPNTPYLLTACADCVIRKWDVR 356
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 29.5 bits (63), Expect = 0.50
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 393 QLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQR---EKSV 530
+L K+I+ G + V F P GQ+L + S D ++VW L EKS+
Sbjct: 175 KLIKVIE-GHHTFVGGLAFDPMGQFLASQSFDHTLKVWKLSTFGVEKSI 222
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 590 LAFARDSDTLAAGSNDGKIKVWKVSTGKVQR 682
LAF LA+ S D +KVWK+ST V++
Sbjct: 190 LAFDPMGQFLASQSFDHTLKVWKLSTFGVEK 220
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 29.1 bits (62), Expect = 0.66
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREK 524
G +V S DG+ ++T S D +++W+L+ +K
Sbjct: 214 GHTDNVRDILISDDGRTILTASSDATIKLWSLRAQK 249
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 29.1 bits (62), Expect = 0.66
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +3
Query: 399 SKIIKFGQKSH---VECARFSPDGQ--YLVTGSVDGVVEVWNLQREKSVRI 536
S + F ++H V + P G YL+T D +++VW+ Q + VRI
Sbjct: 173 SSVANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRI 223
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWN 509
G ++V A F +++GS DG V++W+
Sbjct: 226 GHTNNVSFAFFHSKFPIIISGSEDGTVKIWH 256
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 29.1 bits (62), Expect = 0.66
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = +3
Query: 321 PGTTIDLFRGKAAIRDQEDDLCPTQLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVE 500
PG+T+ G + + D L Q+ ++ G + + F+P G L++ V+G ++
Sbjct: 197 PGSTLLAAAGDSKMITIYDVLSGDQVGQLR--GHAAWIFAVAFNPVGDLLLSADVEGKIK 254
Query: 501 VWNL 512
+W++
Sbjct: 255 IWDI 258
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 450 SPDGQYLVTGSVDGVVEVWN 509
SPDGQ + SVDG + VW+
Sbjct: 112 SPDGQTIAFTSVDGRIAVWD 131
Score = 27.1 bits (57), Expect = 2.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVST 667
+ ++AF D L + +GKIK+W + T
Sbjct: 232 IFAVAFNPVGDLLLSADVEGKIKIWDIDT 260
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 28.7 bits (61), Expect = 0.87
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWN 509
V +S DG +L V+G VE+WN
Sbjct: 204 VSSLAYSSDGGFLAIARVNGFVEIWN 229
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 28.7 bits (61), Expect = 0.87
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKS 527
G V SP+G+ +VTG+ D + W L KS
Sbjct: 502 GHTDRVLYLAMSPNGENIVTGAADETLRFWKLFDSKS 538
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 28.7 bits (61), Expect = 0.87
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 572 EEAVLSLAFARDSDT-LAAGSNDGKIKVWKVSTGK 673
++A LSL++ + T L + DG+ VW V TG+
Sbjct: 260 QKAALSLSWCPEDPTFLLSSGKDGRAMVWNVETGE 294
>SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 488
Score = 28.7 bits (61), Expect = 0.87
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRKTGPSS 700
+ SLA D + AG +G+++ ++ S+G K GP S
Sbjct: 336 ITSLAVHPDGNLFVAGLENGELRFFETSSGNELTKFGPHS 375
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 28.7 bits (61), Expect = 0.87
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWNLQREK 524
V FS +G+YL TG G V +W+ + K
Sbjct: 478 VSALSFSHNGRYLATGDTSGGVCIWSCKTAK 508
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 28.3 bits (60), Expect = 1.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 444 RFSPDGQYLVTGSVDGVVEVW 506
+FS DG+YL G D ++ +W
Sbjct: 245 KFSRDGRYLAVGGQDRILRIW 265
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 441 ARFSPDGQYLVTGSVDGVVEVWNL 512
A F DG Y++ GS D V +W+L
Sbjct: 498 AYFDDDGNYVICGSEDHQVFIWDL 521
Score = 27.1 bits (57), Expect = 2.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 578 AVLSLAFARDSDTLAAGSNDGKIKVWKV 661
A+ ++ F+RD LA G D +++W V
Sbjct: 240 AIWAMKFSRDGRYLAVGGQDRILRIWAV 267
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 611 DTLAAGSNDGKIKVWKVSTGKVQR 682
DTL GS D ++VW + TG+ ++
Sbjct: 457 DTLVTGSTDRTVRVWDLRTGECKQ 480
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 611 DTLAAGSNDGKIKVWKVSTG 670
D + + S DG ++VWK STG
Sbjct: 588 DLIVSASYDGTLRVWKASTG 607
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 390 TQLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
T+ +I+ ++ + F G LVTGS D V VW+L+
Sbjct: 433 TKTGVLIRSLEEHEGDVWTFEYVGDTLVTGSTDRTVRVWDLR 474
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +2
Query: 572 EEAVLSLAFARDSDTL---AAGSNDGKIKVWKVS 664
++ V SLA RD+ TL A+GS DG +K+W S
Sbjct: 64 QDGVYSLA--RDTKTLIDCASGSGDGAVKLWDAS 95
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
V +FS D QY+ +GS D V +W + I
Sbjct: 319 VTAVKFSMDAQYIFSGSDDSNVRLWRARASSRASI 353
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 590 LAFARDSDTLAAGSNDGKIKVWKVSTGKVQRKTGPSS 700
L F+ D L SNDG + W +ST Q T +S
Sbjct: 124 LKFSNDGMVLFTASNDGDVFAWLISTLVDQNSTFETS 160
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +2
Query: 572 EEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRK 685
+ + +L + D+ L +G DG + VW + +V R+
Sbjct: 296 QSPITTLTVSFDASLLISGDKDGNVLVWDSVSRQVLRR 333
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 27.9 bits (59), Expect = 1.5
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWNLQREKS 527
+ CA + PD + TG ++G + +W+ + KS
Sbjct: 344 INCAAYRPDFEQCFTGDMNGNIYMWSPKALKS 375
Score = 26.2 bits (55), Expect = 4.7
Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQY-LVTGSVDGVVEVWNLQREKSVRICV 542
G +V + P ++ L +GS DG +W++++ S C+
Sbjct: 187 GHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIRKVSSSFACM 229
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 551 HDEYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRK 685
H ++ + E +L DSD A +++GK K +++ G Q+K
Sbjct: 503 HQDFSMINEPANTLELENDSDDNALSNSNGKRKWSEINDGLQQKK 547
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 188 EEARSGAALP-SQRPSPGRCPSYLVPSASTTGPGPQMATAPGSAPS 322
E + SGAA P + P P S V S+ST+ P P A +APS
Sbjct: 392 EFSESGAASPQAGHPPPWAAASTSV-SSSTSSPAPWAKPASSAAPS 436
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 179 TAAEEARSGAALPSQRPSPGRCPSYLVPSASTTGPGPQMATAPGSA 316
T + +G+ + PSPG + P ++TT P P AT +A
Sbjct: 551 TVESKHAAGSGSATTIPSPGSATTKPTPGSATTKPTPVSATEEHAA 596
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 450 SPDGQYLVTGSVDGVVEVWNL 512
SPD + VT DGVV W L
Sbjct: 1224 SPDSSFFVTLGSDGVVRAWQL 1244
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 447 FSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
F+ DG LVT S D V VW+ + +K V +
Sbjct: 184 FNADGTRLVTTSRDKKVRVWDPRTDKPVSV 213
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 27.5 bits (58), Expect = 2.0
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 423 KSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
K V + S G+YL T D ++ VW +
Sbjct: 186 KESVWASEISKSGKYLATAGKDAIIRVWKV 215
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVST 667
V S+ RD + +GS+D IK+W + T
Sbjct: 395 VNSVRIIRDRGLVLSGSDDSTIKIWSLET 423
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 414 FGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
FG +S++ C+ + + + ++TGS D VW L + K V
Sbjct: 95 FGHESNI-CSASALNSETIITGSWDSTARVWALGQCKYV 132
>SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 545 QAHDEYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVW 655
+ H E EA+ +AF++D +A S D +++W
Sbjct: 53 EKHREAAAYGEAIRQVAFSKDYSRMATVSEDKCLRLW 89
>SPAC1006.02 |||WD repeat protein, human GNB1L
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 368
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 575 EAVLSLAFARDSDTLAAGSNDGKIKVWKV 661
+ + SLAF S+ +A S D +I +WK+
Sbjct: 339 DGINSLAFHPGSNVIALASKDTRISLWKL 367
>SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.1 bits (57), Expect = 2.7
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 408 IKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
+ F H F P G +++ + D + VWNL+
Sbjct: 251 LPFSNNFHGGSTTFVPQGNFVIGSADDRTLNVWNLR 286
>SPBC32H8.09 |||WD repeat protein, human WDR8
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.1 bits (57), Expect = 2.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 447 FSPDGQYLVTGSVDGVVEVWNLQREK 524
+SP G+ L+ S D + VW+L +K
Sbjct: 108 WSPSGELLLWSSFDSKITVWSLNTQK 133
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +3
Query: 342 FRGKAAIRDQEDDLCPTQLSKIIKFGQKSHVECARF--SPDGQYLVTGSVDGVVEVW 506
+ G+ + D P + II G V + +P +VT S DG+V +W
Sbjct: 264 YNGQVFLWDLRQGQYPVSFTTIISGGHLEPVTDITYINNPPSNNIVTCSTDGLVHIW 320
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 26.6 bits (56), Expect = 3.5
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICVI 545
V C +SP+G +L + D + +W+ K + I
Sbjct: 224 VLCVNYSPNGVFLASCGRDKTIRIWDSTSNKKKSLITI 261
>SPCC63.06 |||human WDR89 family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +3
Query: 444 RFSP-DGQYLVTGSVDGVVEVWNLQREK 524
+F P D + L+TGSVDG+V + + +E+
Sbjct: 153 QFHPKDNELLLTGSVDGLVSLLDTTKEE 180
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 465 YLVTGSVDGVVEVWNLQREKSVRI 536
+LV G DGV++VW+L S I
Sbjct: 169 HLVGGCADGVIKVWDLSTPNSAII 192
Score = 26.2 bits (55), Expect = 4.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 578 AVLSLAFARDSDTLAAGSNDGKIKVWKVSTG 670
A+ S+A ++ TLA G +DG ++ +S G
Sbjct: 112 AIWSIAICDETKTLAVGCDDGSCVLFDISGG 142
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 26.6 bits (56), Expect = 3.5
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 444 RFSPDGQYLVTGSVDGVVEVWNLQ 515
+FS DG+YL + S D + +W+++
Sbjct: 201 KFSSDGRYLCSVSEDRTLRLWSIE 224
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 26.6 bits (56), Expect = 3.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVW 506
V RF+P+G L T +G + +W
Sbjct: 70 VNVVRFNPEGNILATAGDEGTIMLW 94
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 26.2 bits (55), Expect = 4.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVR 533
G V +S DG++L++GS D + VW++ E R
Sbjct: 43 GHTGCVNTLDWSADGEFLLSGSDDTRLIVWDVFNEYKPR 81
>SPCC965.14c |||cytosine deaminase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 162
Score = 26.2 bits (55), Expect = 4.7
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 571 HAHVLIMSLITQILTDFSRCKFQTSTTP 488
HA + LIT+ D +C TST P
Sbjct: 59 HAETRAVGLITKTRRDLEKCTLYTSTEP 86
>SPAC22A12.01c |pso2|snm1, SPAC56F8.17c, snm1|DNA 5' exonuclease
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 560
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 193 GKERRRAAIAASLAGEVSVVPR 258
GKE+ AIA SL+ + VVPR
Sbjct: 371 GKEKVAVAIAKSLSSRIYVVPR 392
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.2 bits (55), Expect = 4.7
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +2
Query: 194 ARSGAALPSQRPSPGRCPSYLVPSASTTGPGPQMATAPGSAPS 322
A SGA P +PS P VPS + P P +A P APS
Sbjct: 1116 APSGAP-PVPKPSVA-APPVPVPSGAPPVPKPSVAAPPVPAPS 1156
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 26.2 bits (55), Expect = 4.7
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 432 VECARFSPD-GQYLVTGSVDGVVEVWNLQREKSVRICVIR 548
+ C +P ++ TGS D VV++WN + S ++ V R
Sbjct: 386 ISCLSVNPSVPSFVATGSTDRVVKLWNTS-DSSPKMVVSR 424
>SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1115
Score = 26.2 bits (55), Expect = 4.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 247 RTPPRRGTLRWQRGAAPCLLR 185
R R+GT+RW+ + PC+ R
Sbjct: 82 RLSNRKGTIRWRYHSVPCVQR 102
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 25.8 bits (54), Expect = 6.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 456 DGQYLVTGSVDGVVEVWNLQ 515
DG Y T S D V++W+L+
Sbjct: 488 DGTYFATASADHTVKLWSLK 507
>SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 25.8 bits (54), Expect = 6.1
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +2
Query: 197 RSGAALPSQRPSPGRCPSYLVPSASTTGPGPQMATAPGSAPSR 325
R AA P +R +P R SAST P AP APSR
Sbjct: 4 RRSAAPPPRRAAPAR-------SASTAAALPPRTMAPPPAPSR 39
>SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 707
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 495 VEVWNLQREKSVRICVIRLMMSTC 566
VEVW+ R+ SVR + L+ + C
Sbjct: 323 VEVWSSTRDDSVRFSAVVLLRTLC 346
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 25.8 bits (54), Expect = 6.1
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 453 PDGQYLVTGSVDGVVEVWNLQ 515
P +YL GS G+V +++LQ
Sbjct: 402 PSNKYLAIGSKSGIVNIYDLQ 422
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 441 ARFSPDGQYLVTGSVDGVVEVWNLQREK 524
A +SPDG + G +G+VE +N+ K
Sbjct: 403 ACWSPDGNNIYIGRRNGIVEEYNIHSGK 430
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVW 655
V LA+ D LA+G ND +++W
Sbjct: 307 VCGLAWRSDGLQLASGGNDNVVQIW 331
>SPAC1A6.02 ||SPAC23C4.21|WD repeat protein, human WDR55
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 361
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 605 DSDTLAAGSNDGKIKVWKVSTGKVQRKTGPSS 700
DSD+L G +DG I++ + K +R G S
Sbjct: 249 DSDSLYVGGSDGCIRLLHILPNKYERIIGQHS 280
>SPAC13G6.08 |||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 535
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICV 542
V +S +G L G VDG ++ W E+ RI +
Sbjct: 233 VSSVAYSYNGDILAVGRVDGTLQFWQ-DNERVPRISI 268
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 533 DLRYQAHDEYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKV-STGKVQRKTG 691
D+R + + ++VL+ ++ + + LA G D KVW + + GK R G
Sbjct: 287 DIRSNSVSAKLPHSDSVLTGSWHPNGNILATGGQDTTAKVWDIRALGKSFRNLG 340
>SPBC354.14c |vac8||vacuolar protein Vac8|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 550
Score = 25.4 bits (53), Expect = 8.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 106 ASSTDKDVSDVARISQHPILAILSTP 29
A T+KDV +V R + P+L +L +P
Sbjct: 72 AEITEKDVREVDRETIEPVLFLLQSP 97
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 25.4 bits (53), Expect = 8.1
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +2
Query: 581 VLSLAFARDSD---TLAAGSNDGKIKVWKVS 664
V +L+F + S TLA+GS D I++W +S
Sbjct: 194 VRTLSFKKTSGSTATLASGSQDRYIRLWNIS 224
>SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 8.1
Identities = 7/20 (35%), Positives = 16/20 (80%)
Frame = +3
Query: 456 DGQYLVTGSVDGVVEVWNLQ 515
+G+YL++G +GV+ +W ++
Sbjct: 273 NGEYLLSGGQEGVLVLWQME 292
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,148,325
Number of Sequences: 5004
Number of extensions: 69296
Number of successful extensions: 526
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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