Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30255
(714 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 128 3e-30
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 44 8e-05
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 42 3e-04
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 40 0.001
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 39 0.003
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 39 0.003
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 38 0.005
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 38 0.005
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 38 0.005
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 38 0.005
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 38 0.005
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 38 0.005
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 38 0.005
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 38 0.007
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 38 0.007
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 38 0.007
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 38 0.009
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 38 0.009
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 38 0.009
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 38 0.009
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 38 0.009
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 37 0.012
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 37 0.012
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 37 0.012
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 37 0.015
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 37 0.015
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 36 0.020
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 36 0.020
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 36 0.020
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 36 0.035
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 35 0.047
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 35 0.047
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 35 0.047
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 35 0.047
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 35 0.062
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 34 0.081
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 34 0.081
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 34 0.081
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 34 0.081
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 34 0.081
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 34 0.081
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 34 0.11
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 34 0.11
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 34 0.11
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 34 0.11
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 33 0.14
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 33 0.14
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 33 0.14
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 33 0.14
At4g28365.1 68417.m04060 plastocyanin-like domain-containing pro... 33 0.25
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 33 0.25
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 33 0.25
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 32 0.33
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 32 0.33
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 32 0.33
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 32 0.43
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 32 0.43
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 31 0.57
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 31 0.57
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 31 0.57
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 31 0.57
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 31 0.57
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 31 0.57
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 31 0.57
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 31 0.57
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 31 0.57
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 31 0.57
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 31 0.57
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 31 0.57
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 31 0.57
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 31 0.57
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 31 0.57
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 31 0.76
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 31 0.76
At5g23930.1 68418.m02810 mitochondrial transcription termination... 31 0.76
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 31 0.76
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 31 0.76
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 31 0.76
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 31 0.76
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 31 0.76
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 31 0.76
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 31 0.76
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 31 0.76
At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pf... 31 1.0
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 31 1.0
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 31 1.0
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 31 1.0
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 31 1.0
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 31 1.0
At1g71070.1 68414.m08202 glycosyltransferase family 14 protein /... 31 1.0
At1g52030.2 68414.m05870 myrosinase-binding protein, putative (F... 31 1.0
At1g52030.1 68414.m05869 myrosinase-binding protein, putative (F... 31 1.0
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 30 1.3
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 30 1.3
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 30 1.3
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 30 1.3
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 30 1.3
At1g19485.1 68414.m02427 AT hook motif-containing protein contai... 30 1.3
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 30 1.8
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 30 1.8
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 30 1.8
At5g06390.1 68418.m00715 beta-Ig-H3 domain-containing protein / ... 30 1.8
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 30 1.8
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 29 2.3
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 29 2.3
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 29 2.3
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 29 2.3
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 29 2.3
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 29 2.3
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 29 2.3
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 29 2.3
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 29 2.3
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 29 2.3
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 29 2.3
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 29 2.3
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 29 2.3
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 29 3.1
At3g52370.1 68416.m05756 beta-Ig-H3 domain-containing protein / ... 29 3.1
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 29 3.1
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 29 3.1
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 29 3.1
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 29 3.1
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 29 3.1
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 29 3.1
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 29 4.0
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 29 4.0
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 29 4.0
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 29 4.0
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 28 5.3
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 28 5.3
At5g53330.1 68418.m06628 expressed protein 28 5.3
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 28 5.3
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 28 5.3
At4g26480.1 68417.m03810 KH domain-containing protein qkI-7, Mus... 28 5.3
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 28 5.3
At4g19440.1 68417.m02860 pentatricopeptide (PPR) repeat-containi... 28 5.3
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 28 5.3
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 28 5.3
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 28 5.3
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 28 5.3
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 28 5.3
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 28 5.3
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 28 5.3
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 28 5.3
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 28 5.3
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 28 5.3
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 28 7.1
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 28 7.1
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 28 7.1
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 28 7.1
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 28 7.1
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 28 7.1
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 28 7.1
At4g34110.1 68417.m04839 polyadenylate-binding protein 2 (PABP2)... 28 7.1
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 28 7.1
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 28 7.1
At1g43780.1 68414.m05043 serine carboxypeptidase S10 family prot... 28 7.1
At1g14370.1 68414.m01703 protein kinase (APK2a) identical to pro... 28 7.1
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 27 9.3
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 27 9.3
At5g07500.1 68418.m00858 zinc finger (CCCH-type) family protein ... 27 9.3
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 27 9.3
At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repe... 27 9.3
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 27 9.3
At1g67000.1 68414.m07618 protein kinase family protein contains ... 27 9.3
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 128 bits (310), Expect = 3e-30
Identities = 56/84 (66%), Positives = 67/84 (79%)
Frame = +3
Query: 258 SHLLALLGQALKWQQHQGLLPPGTTIDLFRGKAAIRDQEDDLCPTQLSKIIKFGQKSHVE 437
S L+AL+GQALKWQQHQGLLPPGT DLFRG AA++ +D P L+ IKFG+KSH E
Sbjct: 158 SRLMALIGQALKWQQHQGLLPPGTQFDLFRGTAAMKQDVEDTHPNVLTHTIKFGKKSHAE 217
Query: 438 CARFSPDGQYLVTGSVDGVVEVWN 509
CARFSPDGQ+L + SVDG +EVW+
Sbjct: 218 CARFSPDGQFLASSSVDGFIEVWD 241
Score = 104 bits (250), Expect = 5e-23
Identities = 51/85 (60%), Positives = 66/85 (77%)
Frame = +1
Query: 1 LMELYEQVVLELIELRELGAARSLLRQTHPCLLMKQHETDRYMHLENLLARSYFDPREAY 180
L +LYEQ+VLE+IELREL AR++LRQT +MKQ + +RY+ +E+LL RSYFDP EAY
Sbjct: 73 LEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQAERYLRMEHLLVRSYFDPHEAY 132
Query: 181 GSGGGKERRRAAIAASLAGEVSVVP 255
G KER+RA IA ++A EV+VVP
Sbjct: 133 GD-STKERKRAQIAQAVAAEVTVVP 156
Score = 70.9 bits (166), Expect = 8e-13
Identities = 28/60 (46%), Positives = 46/60 (76%)
Frame = +2
Query: 506 EFTTGKIRKDLRYQAHDEYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRK 685
++ +GK++KDL+YQA + +M ++ VL + F+RDS+ LA+GS DGKIK+W++ TG R+
Sbjct: 241 DYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRR 300
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWN 509
G S+V A F+ DG ++T S D V+VW+
Sbjct: 345 GHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 596 FARDSDTLAAGSNDGKIKVWKVSTGKVQR 682
F+ D LA+ S DG I+VW +GK+++
Sbjct: 221 FSPDGQFLASSSVDGFIEVWDYISGKLKK 249
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICVIR 548
G K + +FSPDG+YL TG DGVV++W + S+ +R
Sbjct: 196 GHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLLASFLR 239
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 414 FGQKSHVECARFSP-DGQYLVTGSVDGVVEVWNLQREKSVRICVIRLMMSTCAWK 575
F ++V C F+P + +GS+DG +W L E+ V +R +S +++
Sbjct: 309 FHHNNYVTCVEFNPVNKNNFASGSIDGKARIWGLSEERVVAWTDVRDSISAISYQ 363
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVS 664
+ +L F+ D LA G DG +K+W+++
Sbjct: 201 IWTLKFSPDGKYLATGGEDGVVKIWRIT 228
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 414 FGQKSHVECARFSP-DGQYLVTGSVDGVVEVWNLQREKSVRICVIRLMMSTCAWK 575
F KS V C F+P D Y ++GS+DG V +W++ + + V IR +++ ++
Sbjct: 401 FSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWDVSQFRVVDYTDIRQIVTALCYR 455
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 444 RFSPDGQYLVTGSVDGVVEVWNL 512
+FS DG+YL + D VV VWN+
Sbjct: 264 KFSHDGKYLASAGEDCVVRVWNI 286
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +3
Query: 426 SHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICVIRLMMSTCA 569
+ ++CA S DG+ +VTG+ DG+V VW + ++ +RL S CA
Sbjct: 3275 NQIQCAGVSHDGRIVVTGAEDGLVSVWRVSKDGPRGSRRLRLEKSLCA 3322
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 408 IKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICVIRLM-MSTCAW 572
I G +S V SPDG+Y+ +G DG + +W+L S C+ LM ++C W
Sbjct: 536 IFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDL----STARCITPLMGHNSCVW 587
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
VLSLA + D +A+G DG I +W +ST +
Sbjct: 544 VLSLAMSPDGRYMASGDEDGTIMMWDLSTAR 574
Score = 31.9 bits (69), Expect = 0.43
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 429 HVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICV 542
H+ + P+ Y+ TGS D V +W++Q + VRI +
Sbjct: 501 HLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFI 538
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 441 ARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICVIRLMMSTCAWKKRC 584
A+FSP G Y + S D +W++ R + +RI L S W C
Sbjct: 466 AQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHL--SDVDWHPNC 511
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 399 SKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWN 509
S + G V A FSP G ++++ S D + +W+
Sbjct: 410 SYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWS 446
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREK 524
G + RF+PDG+++V+G +D VV+VW+L K
Sbjct: 140 GHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGK 175
Score = 33.1 bits (72), Expect = 0.19
Identities = 10/39 (25%), Positives = 25/39 (64%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVR 533
G +S+ F P G++L +GS D +++W+++++ ++
Sbjct: 98 GHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQ 136
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 387 PTQLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVR 533
PT L + G S V+ F ++ G+ GV+++W+++ K VR
Sbjct: 48 PTSLMSLC--GHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVR 94
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 423 KSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
KS V CARFSPDG + TG D ++++ + + K +
Sbjct: 31 KSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQM 66
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 423 KSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
KS V CARFSPDG + TG D ++++ + + K +
Sbjct: 123 KSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQM 158
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRIC 539
G V C FSPDG+ L +GS D V +W+L E + C
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTC 147
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWN 509
G K+ V +SPDG++LV+GS G + WN
Sbjct: 149 GHKNWVLTVAWSPDGKHLVSGSKSGEICCWN 179
Score = 31.9 bits (69), Expect = 0.43
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 575 EAVLSLAFARDSDTLAAGSNDGKIKVWKVST 667
EAVL ++F+ D LA+GS D +++W + T
Sbjct: 110 EAVLCVSFSPDGKQLASGSGDTTVRLWDLYT 140
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWN 509
G + V FSPDG+++ + S D V +WN
Sbjct: 358 GHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVW 506
G V +SPDG+ +V+G D V+++W
Sbjct: 442 GHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREK 524
G V RF+PDG+++V+G D VV+VW+L K
Sbjct: 234 GHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGK 269
Score = 30.3 bits (65), Expect = 1.3
Identities = 9/35 (25%), Positives = 23/35 (65%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQRE 521
G +S+ F P G++ +GS+D +++W+++++
Sbjct: 192 GHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKK 226
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 590 LAFARDSDTLAAGSNDGKIKVWKVSTGKV 676
L F D + +G D +KVW ++ GK+
Sbjct: 242 LRFTPDGRWIVSGGEDNVVKVWDLTAGKL 270
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 414 FGQKSHVECARFSP-DGQYLVTGSVDGVVEVWNLQREKSVRICVIRLMMSTCAWK 575
F + V C F+P D Y ++GS+DG V +W++ R + V IR +++ ++
Sbjct: 359 FTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYR 413
Score = 33.9 bits (74), Expect = 0.11
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 444 RFSPDGQYLVTGSVDGVVEVWNLQREK 524
+FSPDG+Y+ + D VV VW++ E+
Sbjct: 225 KFSPDGKYIASAGEDCVVRVWSITEEE 251
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 414 FGQKSHVECARFSP-DGQYLVTGSVDGVVEVWNLQREKSVRICVIRLMMSTCAWK 575
F + V C F+P D Y ++GS+DG V +W++ R + V IR +++ ++
Sbjct: 359 FTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYR 413
Score = 33.9 bits (74), Expect = 0.11
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 444 RFSPDGQYLVTGSVDGVVEVWNLQREK 524
+FSPDG+Y+ + D VV VW++ E+
Sbjct: 225 KFSPDGKYIASAGEDCVVRVWSITEEE 251
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +3
Query: 420 QKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICVIRLMMSTCA 569
+ + ++CA S DG+ +VTG+ DG+V VW + ++ +RL + CA
Sbjct: 3329 ESNQIQCAGVSHDGRIVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCA 3378
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 37.9 bits (84), Expect = 0.007
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 441 ARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
A F+PDG+Y+++GS DG + WN++ V
Sbjct: 250 ATFTPDGKYVLSGSGDGTLHAWNIENPSEV 279
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRIC 539
G ++ V CA F G+Y++TGS D +V++W+++ + C
Sbjct: 303 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASC 343
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREK 524
G + FSPDG+++V+G +D VV+VW+L K
Sbjct: 89 GHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGK 124
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVR 533
G S V+ F+ + ++ G+ GV+++W+L+ K VR
Sbjct: 5 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVR 43
Score = 31.1 bits (67), Expect = 0.76
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVR 533
G +S+ F P G++L +GS D + VW+ +++ ++
Sbjct: 47 GHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQ 85
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 557 EYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRKTGPSS 700
E+ C E + SL F LA GS D +K W + T ++ T P +
Sbjct: 128 EFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEA 175
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREK 524
G V RF+PDG+++V+G D +V+VW+L K
Sbjct: 141 GHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGK 176
Score = 29.1 bits (62), Expect = 3.1
Identities = 9/35 (25%), Positives = 23/35 (65%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQRE 521
G +S+ F P G++ +GS+D +++W+++++
Sbjct: 99 GHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 557 EYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRKTGPSS 700
E+ E + SL F LA GS D +K W + T ++ GP +
Sbjct: 180 EFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPET 227
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREK 524
G V RF+PDG+++V+G D +V+VW+L K
Sbjct: 141 GHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGK 176
Score = 29.1 bits (62), Expect = 3.1
Identities = 9/35 (25%), Positives = 23/35 (65%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQRE 521
G +S+ F P G++ +GS+D +++W+++++
Sbjct: 99 GHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 557 EYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRKTGPSS 700
E+ E + SL F LA GS D +K W + T ++ GP +
Sbjct: 180 EFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPET 227
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +3
Query: 375 DDLCPTQLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
D P + K+++ G + V C F+P +V+GS D + +W ++ K VR+
Sbjct: 113 DARSPYECLKVLR-GHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRM 165
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWN 509
G + + C +FS DG L + SVD + +W+
Sbjct: 41 GHTAAISCVKFSNDGNLLASASVDKTMILWS 71
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQR 682
V + F S+ + +GS D I++W+V TGK R
Sbjct: 131 VFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVR 164
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTG 670
+ S+ F RD + + S+DG K+W G
Sbjct: 173 ISSVHFNRDGSLIVSASHDGSCKIWDAKEG 202
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 456 DGQYLVTGSVDGVVEVWNLQ 515
+G+Y+V+GS D V +W+LQ
Sbjct: 269 NGKYIVSGSEDNCVYLWDLQ 288
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 414 FGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICV 542
FG + V C SPD +LVTGS D V +W + + + R V
Sbjct: 2665 FGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKAFTSRTSV 2707
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWN 509
G K V C FS DGQ L +G +DGVV++++
Sbjct: 111 GHKDSVSCLAFSYDGQLLASGGLDGVVQIFD 141
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
G +V C F+PDG+ + TGS D + VWN + +S+ I
Sbjct: 195 GHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHI 234
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 402 KIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQRE 521
K + G + +E R+ P G ++ GS D + +WN +E
Sbjct: 148 KCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKE 187
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 37.1 bits (82), Expect = 0.012
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVR 533
G + V FSP+G+Y+ +GS+D + +W+++ K V+
Sbjct: 539 GHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVK 577
Score = 34.7 bits (76), Expect = 0.062
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 575 EAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKV 676
E V SLAF+ + + +A+GS D I +W + GK+
Sbjct: 542 EPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKI 575
Score = 32.3 bits (70), Expect = 0.33
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Frame = +3
Query: 282 QALKWQQHQGLLPPGTTIDL-FRGKAAIRDQEDD----LCPTQLSKIIKF--GQKSHVEC 440
+A +W+Q Q G T+D+ +R + D LC ++ K G + V C
Sbjct: 395 KAEEWKQ-QFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNC 453
Query: 441 ARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
++ P G L + S D ++WN+++ V
Sbjct: 454 VKWDPTGSLLASCSDDSTAKIWNIKQSTFV 483
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 423 KSHVECARFSPDGQYLVTGSVDGVVEVWNLQREK 524
K + +++ G YL+TGSVD VW+++ E+
Sbjct: 365 KGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEE 398
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = +2
Query: 527 RKDLRYQAHD---EYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
RKDLR + EY AV S++ + +A+GS DG +++W+V TG+
Sbjct: 405 RKDLRPYPNSCYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGR 456
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 378 DLCPTQLSKIIKF-GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICVIRLM 554
DL P S +++ G V G+++ +GS DG V +W ++ + +++
Sbjct: 407 DLRPYPNSCYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEA 466
Query: 555 MSTCAW 572
+ AW
Sbjct: 467 IMCVAW 472
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 438 CARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
C +S DG+YL+TG D +V+VW+++ K V
Sbjct: 350 CCAWSMDGKYLLTGGEDDLVQVWSMEDRKVV 380
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
G V C +SPD Q L TG+ D V+VWN+
Sbjct: 347 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNV 378
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 590 LAFARDSDTLAAGSNDGKIKVWKVSTG 670
+ ++ DS LA G++D K+KVW V +G
Sbjct: 355 VTYSPDSQLLATGADDNKVKVWNVMSG 381
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWNLQREKSVR 533
V F D L++ S+DG V W+ +R K+ +
Sbjct: 394 VTALHFMADNHSLLSASLDGTVRAWDFKRYKNYK 427
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
G V C +SPD Q L TG+ D V+VWN+
Sbjct: 387 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNV 418
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 590 LAFARDSDTLAAGSNDGKIKVWKVSTG 670
+ ++ DS LA G++D K+KVW V +G
Sbjct: 395 VTYSPDSQLLATGADDNKVKVWNVMSG 421
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWNLQREKSVR 533
V F D L++ S+DG V W+ +R K+ +
Sbjct: 434 VTALHFMADNHSLLSASLDGTVRAWDFKRYKNYK 467
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 36.3 bits (80), Expect = 0.020
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +3
Query: 393 QLSKIIKF-GQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
++S++++ G KS V FSP+ + ++T S DG + VWN+
Sbjct: 278 EVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNI 318
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 572 EEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRKTGPSSLK 706
+ AV L F+ +S+ + S DG I+VW ++ + P +LK
Sbjct: 289 KSAVTWLCFSPNSEQIITASKDGSIRVWNINV-RYHLDEDPKTLK 332
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +3
Query: 345 RGKAAIRDQEDDLCPTQLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREK 524
+ +A+ ++Q P L+ + G C FS DG+ L T DGV+ V+ L
Sbjct: 62 KSQASDKNQNKRHHPLDLNTLKGHGDAVTGLC--FSSDGKSLATACADGVIRVFKLDDAS 119
Query: 525 SVRICVIRL 551
S +R+
Sbjct: 120 SKSFKFLRI 128
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 36.3 bits (80), Expect = 0.020
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 438 CARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
C +S DG+Y++TG D +V+VW+++ K V
Sbjct: 350 CCSWSMDGKYILTGGEDDLVQVWSMEDRKVV 380
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 36.3 bits (80), Expect = 0.020
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Frame = +3
Query: 321 PGTTIDLFR-GKAAIRDQEDDLCPTQLS------KIIKFGQKSHVECARFSPDGQYLVTG 479
P T +D R G + D LC S K + + V RFSP+G++++ G
Sbjct: 157 PVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVG 216
Query: 480 SVDGVVEVWNLQREKSVR 533
++D + +WN+ K ++
Sbjct: 217 TLDNTLRLWNISSAKFLK 234
Score = 34.3 bits (75), Expect = 0.081
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 354 AAIRDQEDDLCPTQLSKIIK--FGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKS 527
+A D+ L + +IK G ++ C F+P +V+GS D V +W++ K
Sbjct: 88 SASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKC 147
Query: 528 VRI 536
+++
Sbjct: 148 LKV 150
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 596 FARDSDTLAAGSNDGKIKVWKVSTGK 673
F S+ + +GS D +++W V+TGK
Sbjct: 121 FNPQSNMIVSGSFDETVRIWDVTTGK 146
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 35.5 bits (78), Expect = 0.035
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 542 YQAHDEYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQR 682
YQ+ D + A+L++ F+ D LA+ DG ++VWKV K R
Sbjct: 212 YQSQD-IKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKVVEDKKSR 257
Score = 34.3 bits (75), Expect = 0.081
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 414 FGQKSHVECARFSPDGQ-YLVTGSVDGVVEVWNL 512
F S+V +F+P + Y ++GS+DG V +WN+
Sbjct: 365 FAHNSYVTSVQFNPVNENYFMSGSIDGKVRIWNI 398
Score = 33.9 bits (74), Expect = 0.11
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 444 RFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
+FS DG++L + DG+V VW + +K R+
Sbjct: 228 KFSNDGKFLASSGEDGIVRVWKVVEDKKSRL 258
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 35.1 bits (77), Expect = 0.047
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRIC 539
G ++ V CA G+Y++TGS D +V+VW++ + C
Sbjct: 243 GHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASC 283
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 35.1 bits (77), Expect = 0.047
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 444 RFSPDGQYLVTGSVDGVVEVWNLQREK 524
+FSPDG+YL + DGV+ VW++ ++
Sbjct: 258 KFSPDGRYLASAGEDGVLRVWSVVEDE 284
Score = 31.5 bits (68), Expect = 0.57
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 414 FGQKSHVECARFSP-DGQYLVTGSVDGVVEVWN 509
F ++V +F+P D + ++GS+DG V +W+
Sbjct: 393 FSHNNYVTSVQFNPVDDDHFISGSIDGKVRIWS 425
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 557 EYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKV 661
E E A+L++ F+ D LA+ DG ++VW V
Sbjct: 246 EIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSV 280
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 605 DSDTLAAGSNDGKIKVWKVSTGKV 676
D D +GS DGK+++W S +V
Sbjct: 408 DDDHFISGSIDGKVRIWSASQCQV 431
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 35.1 bits (77), Expect = 0.047
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 444 RFSPDGQYLVTGSVDGVVEVWNLQREK 524
+FSPDG+YL + DGV+ VW++ ++
Sbjct: 258 KFSPDGRYLASAGEDGVLRVWSVVEDE 284
Score = 31.5 bits (68), Expect = 0.57
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 414 FGQKSHVECARFSP-DGQYLVTGSVDGVVEVWN 509
F ++V +F+P D + ++GS+DG V +W+
Sbjct: 393 FSHNNYVTSVQFNPVDDDHFISGSIDGKVRIWS 425
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 557 EYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKV 661
E E A+L++ F+ D LA+ DG ++VW V
Sbjct: 246 EIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSV 280
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 605 DSDTLAAGSNDGKIKVWKVSTGKV 676
D D +GS DGK+++W S +V
Sbjct: 408 DDDHFISGSIDGKVRIWSASQCQV 431
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 35.1 bits (77), Expect = 0.047
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVW 506
G V C RF+P G+ +GS DG + +W
Sbjct: 268 GHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 414 FGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQR 518
F K V FS D +YL+TG + ++ V++L R
Sbjct: 99 FEHKHIVRACAFSQDTKYLITGGFEKILRVFDLNR 133
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 34.7 bits (76), Expect = 0.062
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 387 PTQLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQR 518
PT+ + I+K G + V ARF+ DG Y +T D + +WN R
Sbjct: 7 PTKEAHILK-GHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHR 49
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 34.3 bits (75), Expect = 0.081
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 393 QLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
+L K++ Q+ +C FS DG++LVT S D +W++ K V++
Sbjct: 244 KLEKVLTGHQRWVWDCV-FSVDGEFLVTASSDMTARLWSMPAGKEVKV 290
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 429 HVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
H+ SP +YL T S D V++WN+ K ++
Sbjct: 213 HILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKV 248
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +3
Query: 426 SHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
++V F D +++ +GS DG V++W+L+
Sbjct: 79 NNVMAVGFQCDAKWMYSGSEDGTVKIWDLR 108
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRK 685
V+++ F D+ + +GS DG +K+W + Q++
Sbjct: 81 VMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKE 115
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 34.3 bits (75), Expect = 0.081
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQY--LVTGSVDGVVEVWNLQREK 524
G K V C RFSP+ +V+ S D V+VWNLQ K
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCK 184
Score = 31.9 bits (69), Expect = 0.43
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVR 533
G VE S DGQ+ ++GS DG + +W+L ++ R
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTR 99
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
G ++ SPDG +G DGV+ +W+L K +
Sbjct: 191 GHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKL 228
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +3
Query: 420 QKSHVECA--RFSPDGQYLVTGSVDGVVEVWNLQR 518
QK + C +S DG L +G DGVV VW + R
Sbjct: 291 QKKVIYCTSLNWSADGSTLFSGYTDGVVRVWGIGR 325
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 539 RYQAHDEYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRK 685
R H ++ E+ VLS D +GS DG++++W ++TG+ R+
Sbjct: 58 RLTGHSHFV--EDVVLS----SDGQFALSGSWDGELRLWDLATGETTRR 100
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVW 655
VLS+AF+ D+ + + S D IK+W
Sbjct: 108 VLSVAFSTDNRQIVSASRDRTIKLW 132
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 34.3 bits (75), Expect = 0.081
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2
Query: 596 FARDSDTLAAGSNDGKIKVWKVSTG 670
FA D D LA+ S DGK+ VWK+S G
Sbjct: 211 FAEDVDMLASVSLDGKVFVWKISEG 235
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 34.3 bits (75), Expect = 0.081
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2
Query: 596 FARDSDTLAAGSNDGKIKVWKVSTG 670
FA D D LA+ S DGK+ VWK+S G
Sbjct: 246 FAEDVDMLASVSLDGKVFVWKISEG 270
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 34.3 bits (75), Expect = 0.081
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQY--LVTGSVDGVVEVWNLQREK 524
G K V C RFSP+ +V+ S D V+VWNLQ K
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCK 184
Score = 31.9 bits (69), Expect = 0.43
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVR 533
G V+ S DGQ+ ++GS DG + +W+L +S R
Sbjct: 61 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTR 99
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
G ++ SPDG +G DGV+ +W+L K +
Sbjct: 191 GHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKL 228
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 447 FSPDGQYLVTGSVDGVVEVWNLQR 518
+S DG L +G DGV+ VW + R
Sbjct: 302 WSADGNTLFSGYTDGVIRVWGIGR 325
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRK 685
V + + D +GS DG++++W ++TG+ R+
Sbjct: 66 VQDVVLSSDGQFALSGSWDGELRLWDLATGESTRR 100
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVW 655
VLS+AF+ D+ + + S D IK+W
Sbjct: 108 VLSVAFSTDNRQIVSASRDRTIKLW 132
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 587 SLAFARDSDTLAAGSNDGKIKVWKV 661
SL ++ D +TL +G DG I+VW +
Sbjct: 299 SLNWSADGNTLFSGYTDGVIRVWGI 323
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 34.3 bits (75), Expect = 0.081
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVW 506
G V C R++P G+ +GS DG V +W
Sbjct: 263 GHHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 450 SPDGQYLVTGSVDGVVEVWNLQREKSVRICVIRLM-MSTCAW 572
SPD Y+ GS DG V VW+L + V I + + C+W
Sbjct: 454 SPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSW 495
Score = 31.9 bits (69), Expect = 0.43
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 605 DSDTLAAGSNDGKIKVWKVSTGKV 676
D D +AAGS DG + VW +S G +
Sbjct: 456 DDDYVAAGSADGSVHVWSLSKGNI 479
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQ 679
+L +A D+ ++ A ++ + VW VS+G+V+
Sbjct: 276 ILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVR 308
Score = 27.5 bits (58), Expect = 9.3
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 587 SLAFARDSDTLAAGSNDGKIKVWKVSTGKV 676
++ + D T+ +G DG +++W + TGK+
Sbjct: 362 AICLSIDGLTVFSGHMDGNLRLWDIQTGKL 391
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQR 518
G V C FS D LV+GS DG + VW+L R
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIR 151
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICV 542
+ C + DG L++GS DGVV VW+ + + VR +
Sbjct: 266 ITCLAYCADGNLLISGSEDGVVCVWDPKSLRHVRTLI 302
Score = 31.9 bits (69), Expect = 0.43
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 506 EFTTGKIRKDLRYQAHDEYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKV 661
E TGK+ K + H Y +V L F+ D L +GS DG I+VW +
Sbjct: 106 EVATGKLLK----KWHGHY----RSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 575 EAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRK 685
E + +LA + L G G I +W+V+TGK+ +K
Sbjct: 79 EPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKK 115
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 575 EAVLSLAFARDSDTLAAGSNDGKIKVW 655
+A+ LA+ D + L +GS DG + VW
Sbjct: 264 KAITCLAYCADGNLLISGSEDGVVCVW 290
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 414 FGQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
+G K V C S DG+ +VTGS D +++W L
Sbjct: 579 YGHKLPVMCIDISSDGELIVTGSQDKNLKIWGL 611
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 33.9 bits (74), Expect = 0.11
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +3
Query: 402 KIIKFGQKSH-VECARFSPDGQYLVTGSVDGVVEVW 506
K+ +G+ ++ AR+SP+G+++ +G V G V +W
Sbjct: 48 KVSIYGEHAYPATVARYSPNGEWIASGDVSGTVRIW 83
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
G K + +SPDG+ ++T S D ++W++
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDI 261
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 426 SHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICV 542
+ + C +SP+ + TGS+D V V+ + + S R+ +
Sbjct: 535 ARINCLAWSPNSTMVATGSLDTCVIVYEVDKPASSRMTI 573
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 441 ARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
A FSP+G ++V+GS DG W ++ K V
Sbjct: 256 AAFSPEGMFVVSGSGDGSTHAWGVRSGKQV 285
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 575 EAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
E+ L AF+ + + +GS DG W V +GK
Sbjct: 251 ESTLDAAFSPEGMFVVSGSGDGSTHAWGVRSGK 283
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 441 ARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
A FSP+G ++V+GS DG W ++ K V
Sbjct: 253 AAFSPEGMFVVSGSGDGSTHAWGVRSGKQV 282
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 575 EAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
E+ L AF+ + + +GS DG W V +GK
Sbjct: 248 ESTLDAAFSPEGMFVVSGSGDGSTHAWGVRSGK 280
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVW 506
G V C RF+P G +GS DG + +W
Sbjct: 268 GHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVW 506
G V C RF+P G +GS DG + +W
Sbjct: 268 GHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At4g28365.1 68417.m04060 plastocyanin-like domain-containing
protein
Length = 199
Score = 32.7 bits (71), Expect = 0.25
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +2
Query: 113 KQIGICILKTC*HVHISTLVRHTAAEEARSGAALPSQRPSPGRCPSYLVPSASTTGPGPQ 292
+++ + +L T VH S RHT+ + L S PSPG PS +++ P P
Sbjct: 120 QKLAVKVLST---VHHSHSPRHTSPSPSPVHQELSSPGPSPGVEPS---SDSNSRVPAPG 173
Query: 293 MATAPGSA 316
ATAP SA
Sbjct: 174 PATAPNSA 181
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/33 (48%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +2
Query: 575 EAVLSLAFARD-SDTLAAGSNDGKIKVWKVSTG 670
E+VL LA+ ++ + LA+ S D K+KVW V+TG
Sbjct: 266 ESVLGLAWNKEFRNILASASADKKVKVWDVATG 298
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
G +V SPDG +G DGVV +W+L K +
Sbjct: 192 GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKL 229
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVR 533
G VE S DGQ+ ++GS DG + +W+L S R
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTR 99
Score = 31.1 bits (67), Expect = 0.76
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 417 GQKSHVECARFSPD--GQYLVTGSVDGVVEVWNLQREK 524
G + V C RFSP+ +V+ S D V+VWNL K
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK 185
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 447 FSPDGQYLVTGSVDGVVEVWNLQR 518
+S DG L +G DGV+ VW + R
Sbjct: 303 WSADGSTLFSGYTDGVIRVWGIGR 326
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +3
Query: 390 TQLSKIIKF-GQKSHVECARFSPDGQYLVTGSV-DGVVEVWNLQ-REKSVRICVIRL 551
+ L KI KF G V C F+ DG+Y+++ +V + + VW +K CV+ L
Sbjct: 186 SDLKKIQKFTGHPGVVRCVAFTEDGKYVLSSAVGERYIAVWKTDGAKKQSASCVLAL 242
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 593 AFARDSDTLAAGSNDGKIKVWKVSTGKVQ 679
+F+ D LA + DG+IK+W G+VQ
Sbjct: 12 SFSPALDYLALSTGDGRIKIWDTVKGQVQ 40
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 390 TQLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
T S ++ G V FSP+G +L +G D +W+L+ KS+ I
Sbjct: 412 TGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYI 460
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 414 FGQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
FG + FS DG+ L T S+ GV ++W +
Sbjct: 252 FGDDRPLTGCSFSRDGKILATCSLSGVTKLWEM 284
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 426 SHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
SH+ SP +YL T S D V++WNL K ++
Sbjct: 218 SHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKV 254
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 393 QLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICVIRLMMSTC 566
+L K++ G + V FS DG+YLVT S D +W+++ K + + C
Sbjct: 250 KLEKVLT-GHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRKATVC 306
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRK 685
V+++ F + +GS DG +K+W + + QR+
Sbjct: 87 VMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQRE 121
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 31.9 bits (69), Expect = 0.43
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 450 SPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
S DG+YL TG VD V +W+++ + V++
Sbjct: 215 SSDGRYLATGGVDCHVHLWDIRTREHVQV 243
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 31.9 bits (69), Expect = 0.43
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 426 SHVECARFSPDGQYLVTGSVDGVVEVWNLQREK 524
+ V FS DG YL +G +GV+ VW L K
Sbjct: 284 AEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK 316
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 590 LAFARDSDTLAAGSNDGKIKVWKVSTGK 673
L F+ D L +G +G + VW++ TGK
Sbjct: 289 LNFSSDGAYLYSGGREGVLVVWQLDTGK 316
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = +3
Query: 393 QLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQR 518
++ K + F +K ++ ++SPD YL++GSVD +W++ +
Sbjct: 44 KVHKSLSFHRKDVLDL-QWSPDDAYLISGSVDNSCIIWDVNK 84
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = +3
Query: 393 QLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQR 518
++ K + F +K ++ ++SPD YL++GSVD +W++ +
Sbjct: 103 KVHKSLSFHRKDVLDL-QWSPDDAYLISGSVDNSCIIWDVNK 143
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWNL 512
V RFSP G+ L +G+ G + +W L
Sbjct: 67 VNTIRFSPSGELLASGADGGELFIWKL 93
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = +3
Query: 393 QLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQR 518
++ K + F +K ++ ++SPD YL++GSVD +W++ +
Sbjct: 103 KVHKSLSFHRKDVLDL-QWSPDDAYLISGSVDNSCIIWDVNK 143
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWNL 512
V RFSP G+ L +G+ G + +W L
Sbjct: 67 VNTIRFSPSGELLASGADGGELFIWKL 93
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 31.5 bits (68), Expect = 0.57
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +3
Query: 261 HLLA--LLGQALKWQQHQGLLPPGTTIDLFRGKAAIRDQEDDLCPTQLSKIIKFGQKSHV 434
HL A ++GQ G+L GT+ A D E D P + ++ G V
Sbjct: 205 HLQAAGVVGQVNAMTIANGMLFAGTSSGSILVWKATTDSESD--PFKYLTSLE-GHSGEV 261
Query: 435 ECARFSPDGQYLVTGSVDGVVEVWNL 512
C F+ GQ L +GSVD +++W+L
Sbjct: 262 TC--FAVGGQMLYSGSVDKTIKMWDL 285
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2
Query: 617 LAAGSNDGKIKVWKVSTGK 673
+A+GS D K+KVW V+TGK
Sbjct: 230 VASGSEDKKVKVWDVATGK 248
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 450 SPDGQYLVTGSVDGVVEVWNLQREKSVR 533
S DG+YL TG VD V +W+++ + V+
Sbjct: 231 SSDGRYLATGGVDRHVHIWDVRTREHVQ 258
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 578 AVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRKTGPS 697
+V+S+A + D + S DG I W VS+GK + PS
Sbjct: 163 SVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPS 202
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
G ++ V C F L +GS D V+VWN++
Sbjct: 262 GHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVE 294
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 31.5 bits (68), Expect = 0.57
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +2
Query: 515 TGKIRKDLR-YQAHDEYMCMEE-AVLSLAFARDSDTLAAGSNDGKIKVWKVST--GKVQR 682
TG K++R ++ H E+ + + L A D + G DGKI+VWK ++ V R
Sbjct: 113 TGSDSKNIRVWKNHVEFSSFKSNSGLVKAIVLAGDKIFTGHQDGKIRVWKAASKESNVHR 172
Query: 683 KTG 691
+ G
Sbjct: 173 RVG 175
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
G + V +SPD L +GS+D V +WN++
Sbjct: 116 GHTADVVDLNWSPDDSMLASGSLDNTVHIWNMR 148
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 596 FARDSDTLAAGSNDGKIKVWKVSTG 670
FA D LA+ S DGK+ VWK+S G
Sbjct: 230 FAEDVHLLASVSLDGKVFVWKISEG 254
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 417 GQKSHVECARFSP-DGQYLVTGSVDGVVEVWN 509
G K +V C SP + LVTGS D V+VW+
Sbjct: 176 GHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWD 207
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 557 EYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRKT 688
E+ E+ + + FA DS L S DG + V + T KVQ ++
Sbjct: 73 EFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQS 116
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 557 EYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRKT 688
E+ E+ + + FA DS L S DG + V + T KVQ ++
Sbjct: 130 EFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQS 173
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWNLQREK 524
+ +FS DG+ L++ S DG ++VW+L++ K
Sbjct: 376 ITSVKFSSDGRILLSRSFDGSLKVWDLRQMK 406
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTG 670
V + A+ RD +A G DG I++W + G
Sbjct: 330 VTTCAWDRDGKRIAGGVGDGSIQIWSLKPG 359
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 348 GKAAIRDQEDDLCPTQL--SKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
G I D + L TQ+ K+ + G+ CA + DG+ + G DG +++W+L+
Sbjct: 301 GSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCA-WDRDGKRIAGGVGDGSIQIWSLK 357
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 31.5 bits (68), Expect = 0.57
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 515 TGKIRKDLRYQAHDEYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRKTGP 694
+GKI+ + ++ H +Y+ V+S + A + GS DG ++W TGK + G
Sbjct: 190 SGKIK--MTFKGHSDYL---HTVVSRSSASQ---ILTGSEDGTARIWDCKTGKCVKVIGS 241
Query: 695 SSLKGR 712
K R
Sbjct: 242 QDKKSR 247
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
G V FS + QY+ + S+D + VW L R +R+
Sbjct: 214 GHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRV 253
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 554 DEYMCMEEAVLSLAFAR--DSDTLAAGSNDGKIKVWKVSTGK 673
D + ++ ++ +AR DS T+ GS DG +K W + G+
Sbjct: 247 DPLIVLDGHTKTVTYARFMDSHTIVTGSTDGSLKQWDIDNGR 288
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 405 IIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
I+ G V ARF D +VTGS DG ++ W++ + V
Sbjct: 250 IVLDGHTKTVTYARFM-DSHTIVTGSTDGSLKQWDIDNGRRV 290
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 31.1 bits (67), Expect = 0.76
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 261 HLLALLGQALKWQQHQGLLPPGTTI-DLFRGKAAIRDQEDDLCPTQLSKIIKFGQKSHVE 437
HL ++GQ G+L GT+ + KA D E D P + ++ V
Sbjct: 261 HLEGVVGQVHAMTAANGMLFAGTSSGSILVWKAT--DSESD--PFKYLTSLEGHHSGEVT 316
Query: 438 CARFSPDGQYLVTGSVDGVVEVWNL 512
C F G+ L +GSVD ++VW+L
Sbjct: 317 C--FVVGGEVLYSGSVDKTIKVWDL 339
>At5g23930.1 68418.m02810 mitochondrial transcription termination
factor-related / mTERF-related contains Pfam profile
PF02536: mTERF
Length = 457
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 187 RCRMPHEGRNMNVLTGFQDAYTDLFHAASSTDKDVS 80
R R H+ RN+N+L A+T+ F + +T KD+S
Sbjct: 11 RSRELHQWRNLNLLLQNSSAFTESFSSVVTTTKDLS 46
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 569 MEEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
M +V SLAF+ D L + DG++ VW + T K
Sbjct: 373 MNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMK 407
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWNLQREK 524
V FS DG++L++ DG V VW+L+ K
Sbjct: 377 VRSLAFSEDGKHLLSSGGDGQVYVWDLRTMK 407
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTGKV 676
V++LA + D +AA DG +++W VS G V
Sbjct: 16 VVALANSSDDSQVAAAREDGSLEIWLVSPGAV 47
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 31.1 bits (67), Expect = 0.76
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 450 SPDGQYLVTGSVDGVVEVWNLQR 518
SPDG+Y+++GS DG +W + +
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQVNK 369
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 31.1 bits (67), Expect = 0.76
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 444 RFSPDGQYLVTGSVDGVVEVWNLQ 515
+FS D YL +G D V+ VW +Q
Sbjct: 411 KFSQDAHYLASGGADRVIHVWEVQ 434
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNL--QREKSV 530
G +V CA F P +V+ S+D V VW++ R+K+V
Sbjct: 133 GHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTV 172
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 572 EEAVLSLAFAR-DSDTLAAGSNDGKIKVWKVSTG 670
E+ V S+ ++ D LA+GS+DG +K+W ++ G
Sbjct: 576 EKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG 609
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 572 EEAVLSLAFAR-DSDTLAAGSNDGKIKVWKVSTG 670
E+ V S+ ++ D LA+GS+DG +K+W ++ G
Sbjct: 576 EKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG 609
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 31.1 bits (67), Expect = 0.76
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 441 ARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
A F PDG L TG+ +V++W+++ + +V
Sbjct: 360 AAFHPDGLILGTGTAQSIVKIWDVKSQANV 389
>At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 512
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +3
Query: 447 FSPDGQYLVTGSVDGVVEVWNLQ 515
+SPDG Y+ +GSVD V+ V++++
Sbjct: 446 WSPDGLYITSGSVDPVIHVFDIR 468
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 411 KFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREK 524
K K V +SP+G+ L GS+DG + V+++ R K
Sbjct: 154 KTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSK 191
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVR 533
G S V SPDG + TGS D V +W+L+ +++
Sbjct: 241 GHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQ 279
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +2
Query: 578 AVLSLAFARD-SDTLAAGSNDGKIKVWKVSTG 670
+VL LA+ ++ + LA+ S D K+KVW V+TG
Sbjct: 235 SVLGLAWNKEFRNILASASADKKVKVWDVATG 266
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 441 ARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
A F PDG L TG+ VV++W+++ + +V
Sbjct: 359 AAFHPDGLILGTGTSQSVVKIWDVKSQANV 388
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 441 ARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
A F PDG L TG+ VV++W+++ + +V
Sbjct: 359 AAFHPDGLILGTGTSQSVVKIWDVKSQANV 388
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
G +V CA F P +V+ S+D V VW++
Sbjct: 133 GHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
>At1g71070.1 68414.m08202 glycosyltransferase family 14 protein /
core-2/I-branching enzyme family protein similar to
glucosaminyl (N-acetyl) transferase GB:4758422 from
[Homo sapiens]
Length = 395
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -3
Query: 352 LPRNKSIVVPGGSRPWCCCHLRAWPSSASRWDEV 251
L R + V PG WC H W S WDEV
Sbjct: 334 LKRGRYRVTPGA---WCSSHSSWWTDPCSEWDEV 364
>At1g52030.2 68414.m05870 myrosinase-binding protein, putative
(F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
protein-like f-AtMBP [Arabidopsis thaliana]; similar to
myrosinase binding protein GI:1711295 from [Brassica
napus]; contains Pfam PF01419: Jacalin-like lectin
domain; identical to cDNA myrosinase-binding
protein-like protein (MBP1.2) GI:6760446
Length = 642
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = +2
Query: 158 ISTLVRHTAAEEARSGAALPSQRPSPGRCPSYLVPSASTTGPGPQMATAP 307
I L H A A + A P+ P+P PS SA P P A AP
Sbjct: 282 IDALGAHFAPLPAPTPAPAPAPAPAPAPAPSPAPASAPVPAPAPTPAPAP 331
>At1g52030.1 68414.m05869 myrosinase-binding protein, putative
(F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
protein-like f-AtMBP [Arabidopsis thaliana]; similar to
myrosinase binding protein GI:1711295 from [Brassica
napus]; contains Pfam PF01419: Jacalin-like lectin
domain; identical to cDNA myrosinase-binding
protein-like protein (MBP1.2) GI:6760446
Length = 642
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = +2
Query: 158 ISTLVRHTAAEEARSGAALPSQRPSPGRCPSYLVPSASTTGPGPQMATAP 307
I L H A A + A P+ P+P PS SA P P A AP
Sbjct: 282 IDALGAHFAPLPAPTPAPAPAPAPAPAPAPSPAPASAPVPAPAPTPAPAP 331
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 387 PTQLSKIIKF-GQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
PT +SKI G V SPDGQ +VTG+ D + WN+
Sbjct: 453 PT-MSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 572 EEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQR 682
E++V S+ +A LA G++ GK+++W S K R
Sbjct: 252 EDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTR 288
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 387 PTQLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
PT G V SPDGQ +VTG+ D + WN+
Sbjct: 410 PTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 575 EAVLSLAFARDSDTLAAGSNDGKIKVWKVSTG 670
+++ + F+ DS+ LA S DG ++WK G
Sbjct: 165 KSIRDMDFSLDSEFLATTSTDGSARIWKAEDG 196
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 572 EEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRKTGPSS 700
+ A+L L + D + + S D ++ W V TGK +K S
Sbjct: 96 KNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHS 138
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICV 542
G + + SPDG YL+T +D + VW+++ CV
Sbjct: 220 GHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCV 261
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +3
Query: 420 QKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
+K+ ++C+ +SPDG + GS D +V +W+ +++
Sbjct: 272 EKNLLKCS-WSPDGTKVTAGSSDRMVHIWDTTSRRTI 307
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWN 509
G +V F P+ ++TGS DG V +W+
Sbjct: 227 GHTHNVSAVSFHPELPIIITGSEDGTVRIWH 257
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 456 DGQYLVTGSVDGVVEVWNLQREKSVR 533
D YL+TGS D +VW+ Q + V+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQ 223
>At1g19485.1 68414.m02427 AT hook motif-containing protein contains
Pfam profile: PF00730 HhH-GPD superfamily base excision
DNA repair protein; contains Pfam PF02178: AT hook
motif; contains Pfam PF00400: WD domain, G-beta repeat
(5 copies); contains Prosite PS00354: HMG-I and HMG-Y
DNA-binding domain (A+T-hook)
Length = 815
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 611 DTLAAGSNDGKIKVWKVSTGKVQRKTGP 694
D L AG +DG + +WK ST K T P
Sbjct: 450 DFLLAGCHDGTVALWKFSTTKSSEDTRP 477
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
G K V ++ +G L +GSVD +WN++
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIE 50
Score = 29.5 bits (63), Expect = 2.3
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 438 CARFSPDGQYLVTGSVDGVVEVWNL 512
C P G+Y GS D +V +W++
Sbjct: 196 CIAIDPKGRYFAVGSADSLVSLWDI 220
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRICVIRLMMSTCAWKKR 581
V F+ G+Y+ + S D +++ N+Q ++V R M++ W +
Sbjct: 236 VRTISFNYSGEYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPK 285
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +3
Query: 333 IDLFRGKAAIRDQEDDLCPTQLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
+ L++ RDQ P++ +I+ K+ V +FS G+YL T S D +W +
Sbjct: 199 VSLYKDHCCGRDQ----IPSETVQIL-VAHKNEVWFVQFSNSGKYLATASSDCTAIIWKV 253
Query: 513 QREKSVRI 536
+ V +
Sbjct: 254 LDDNKVEL 261
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 396 LSKIIKF-GQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
+SK+ G V SPDGQ +VTG+ D + WN+
Sbjct: 418 MSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +3
Query: 390 TQLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVR 533
++++K+ G V +++ +G Y+ G+ G V+VW+ + K VR
Sbjct: 204 SKVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVR 251
>At5g06390.1 68418.m00715 beta-Ig-H3 domain-containing protein /
fasciclin domain-containing protein contains Pfam
profile PF02469: Fasciclin domain
Length = 458
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +2
Query: 158 ISTLVRHTAAE-EARSGAALPSQRPSPGRCPSYLVPSASTTGPGPQMATAPGSAP--SRH 328
IS ++ A E + R+ P P P L P S PGP +A AP P +H
Sbjct: 202 ISAVLPEGAPEVDPRTNRLKKPAAPVPAGSPPAL-PIQSAMAPGPSLAPAPAPGPGGKQH 260
Query: 329 HY 334
H+
Sbjct: 261 HF 262
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 423 KSHVECARFSPDGQYLVTGSVDGVVEVWNLQREK 524
KS V C S G+ +++GS D + VW + + K
Sbjct: 895 KSTVTCFSLSETGECVLSGSADKTIRVWQIVKGK 928
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGS-VDGVVEVWNLQREKSVRICVIRLMMST 563
GQ+ V +FS DG YL TG D + W+++ KSV I V +L +T
Sbjct: 253 GQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDIR--KSVEI-VYKLYRAT 299
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTG 670
V S+AF ++ GS D IK+W V+TG
Sbjct: 179 VRSVAFDPSNEWFCTGSADRTIKIWDVATG 208
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
G V F P ++ TGS D +++W++
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDV 205
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 399 SKIIK--FGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
+K+I+ G S V C P L+TG D V VW+++ + +
Sbjct: 250 NKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQI 295
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 29.5 bits (63), Expect = 2.3
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +3
Query: 447 FSPDGQYLVTGSVDGVVEVWNLQREKSV 530
FS DG+++++ S+DG + +W++ K +
Sbjct: 565 FSEDGKWVISSSMDGSLRIWDVILAKQI 592
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 402 KIIKFGQKSH--VECARFSPDGQ-YLVTGSVDGVVEVWNLQREK 524
+I+ F S V FS DG+ L +G GV+ +WNL +++
Sbjct: 215 EIVTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKR 258
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTG 670
V S+AF ++ GS D IK+W V+TG
Sbjct: 173 VRSVAFDPSNEWFCTGSADRTIKIWDVATG 202
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
G V F P ++ TGS D +++W++
Sbjct: 168 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDV 199
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWN 509
G +V F P+ ++TGS DG V +W+
Sbjct: 227 GHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 456 DGQYLVTGSVDGVVEVWNLQREKSVR 533
D YL+TGS D +VW+ Q + V+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQ 223
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWN 509
G +V F P+ ++TGS DG V +W+
Sbjct: 227 GHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 456 DGQYLVTGSVDGVVEVWNLQREKSVR 533
D YL+TGS D +VW+ Q + V+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQ 223
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWN 509
G +V F P+ ++TGS DG V +W+
Sbjct: 227 GHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 456 DGQYLVTGSVDGVVEVWNLQREKSVR 533
D YL+TGS D +VW+ Q + V+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQ 223
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
G V C S D L+TGS D ++W+++ K +
Sbjct: 77 GHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKEL 114
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +2
Query: 515 TGKIRKDLRYQAHDEYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVST 667
TGK+ K DE + +EA+ SL A D GS+D K+W + T
Sbjct: 206 TGKLLKQ-----SDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRT 251
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 578 AVLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
AV +RDS L GS D K+W V +GK
Sbjct: 81 AVWCCDISRDSSRLITGSADQTAKLWDVKSGK 112
Score = 27.5 bits (58), Expect = 9.3
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +2
Query: 608 SDTLAAGSNDGKIKVWKVSTGKVQRKT 688
+ T+ +G D I++W TGK+ +++
Sbjct: 187 NQTIVSGGEDAAIRIWDAETGKLLKQS 213
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
G V FSP+G +L +G D +W+L+ K + I
Sbjct: 170 GHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYI 209
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 411 KFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
KFG + S DG+ LVT S+ GV ++W +
Sbjct: 59 KFGDDRPLTGCSLSRDGKILVTCSLSGVPKLWEV 92
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 423 KSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKS 527
K V C + D L TGS D V VW++ R ++
Sbjct: 1046 KDVVSCVAVTADSTILATGSYDTTVMVWDILRMRT 1080
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWN 509
G +V F P+ ++TGS DG V +W+
Sbjct: 227 GHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 456 DGQYLVTGSVDGVVEVWNLQREKSVR 533
D YL+TGS D +VW+ Q + V+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQ 223
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 390 TQLSKIIKFGQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
TQL + +K G S V C + G+ ++T + DG V++W+++ + V
Sbjct: 929 TQLLEELK-GHDSQVSCVKML-SGERVLTAAHDGTVKMWDVRTDMCV 973
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 578 AVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRK 685
A+LSL + + LAA D +W + +GK K
Sbjct: 982 AILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHK 1017
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTG 670
V++LA + D +AA DG +++W VS G
Sbjct: 16 VVALATSADGSQVAAAREDGSLELWLVSPG 45
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 611 DTLAAGSNDGKIKVWKVSTGK 673
D + G DGKI++WKVS K
Sbjct: 174 DRIFTGHQDGKIRIWKVSKRK 194
>At3g52370.1 68416.m05756 beta-Ig-H3 domain-containing protein /
fasciclin domain-containing protein weak similarity to
osteoblast specific factor 2 [Homo sapiens] GI:393319;
contains Pfam profile PF02469: Fasciclin domain;
supporting cDNA gi|26450295|dbj|AK117608.1|
Length = 436
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +2
Query: 227 PSPGRCPSYLVPSASTTGPGPQMATAPGSAP--SRHHY 334
P P P L P PGP +A AP P RHH+
Sbjct: 207 PIPAGAPPVL-PVYDAMSPGPSLAPAPAPGPGGPRHHF 243
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 506 EFTTGKIRKDLRYQAHDEYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQ 679
EFT+ K D + E VL+ F+ D L +G G VW++ TGK Q
Sbjct: 226 EFTSVKTEDDTESCTTFNWHSAEVTVLN--FSSDGALLYSGVKAGDFVVWELGTGKKQ 281
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 605 DSDTLAAGSNDGKIKVWK--VSTGKVQRKTGPSSLKG 709
D L S DG +++WK + GK + TG SS++G
Sbjct: 1085 DDSLLLVASCDGSVRIWKNYATKGKQKLVTGFSSIQG 1121
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
G V C S D L+TGS D ++W+++ K +
Sbjct: 50 GHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKEL 87
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 578 AVLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
AV +RDS L GS D K+W V +GK
Sbjct: 54 AVWCCDVSRDSSRLITGSADQTAKLWDVKSGK 85
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
G V C S D L+TGS D ++W+++ K +
Sbjct: 50 GHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKEL 87
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 578 AVLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
AV +RDS L GS D K+W V +GK
Sbjct: 54 AVWCCDVSRDSSRLITGSADQTAKLWDVKSGK 85
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
G V C S D L+TGS D ++W+++ K +
Sbjct: 50 GHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKEL 87
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 578 AVLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
AV +RDS L GS D K+W V +GK
Sbjct: 54 AVWCCDVSRDSSRLITGSADQTAKLWDVKSGK 85
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 560 YMCMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKV 676
YM +AV + F+ D D IK W TG+V
Sbjct: 322 YMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQV 360
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 423 KSHVECARFSPDGQYLVTGSVDGVVEVWNL 512
K + +FS DG+YL + D V+++W +
Sbjct: 363 KGSIWSIKFSLDGRYLASAGEDCVIQIWKV 392
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
G + V F P L TGS DG + +W+ + ++V
Sbjct: 15 GHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAV 52
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 548 AHDEYMCMEEAVLSLAFAR-DSDTLAAGSNDGKIKVWK 658
A D C ++V SLA + + L + S DG IKVWK
Sbjct: 1457 ATDTAGCHRDSVQSLASVKLNQRLLISSSRDGAIKVWK 1494
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 584 LSLAFARDSDTLAAGSNDGKIKVWK 658
L+LAF + LAAG+ DG ++V+K
Sbjct: 157 LALAFNPEGSVLAAGAEDGTLRVFK 181
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 215 PSQRPSPGRCPSYLVPSASTTGPGPQMATAPGSAPS 322
P +P P P P+ + T P P+ A AP P+
Sbjct: 84 PKPKPKPAPTPPNPKPTPAPTPPKPKPAPAPAPTPA 119
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 432 VECARFSPDGQYLVTGSVDGVVEVWN 509
++C FSPDG+ L +GS DG V +++
Sbjct: 390 IKC-NFSPDGETLASGSSDGSVYMYD 414
>At5g53330.1 68418.m06628 expressed protein
Length = 221
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +2
Query: 215 PSQRPSPG-RCPSYLVPS-ASTTGPGPQMATAPGSAPSRHH 331
PS PSP P Y P TGPGPQ + P S H
Sbjct: 22 PSTSPSPSSNHPMYGYPKIGQQTGPGPQFFSPPERNSSFQH 62
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSV 530
G S V A F DG V+ DG++++WN+ + +
Sbjct: 581 GHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECI 618
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 536 LRYQAHDEYM-CMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGKV 676
L+ AH++Y+ C++ L D D +GS D KI++W +S +V
Sbjct: 553 LKLFAHNDYVTCVQFNPL------DEDYFISGSLDAKIRIWNISNRQV 594
>At4g26480.1 68417.m03810 KH domain-containing protein qkI-7, Mus
musculus
Length = 555
Score = 28.3 bits (60), Expect = 5.3
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +1
Query: 85 HPCLLMKQHETDRYMHLENLLARSYFDPREAYGSGGGKERRRAAI---AASLAGEVSVVP 255
H C LM Q LEN L++S FD SGG + RA + A+ E SV
Sbjct: 328 HVCRLMNQEILRVTTLLENALSQSRFDHPSPLASGGIFQNSRADMNGWASQFPSERSVSS 387
Query: 256 RP 261
P
Sbjct: 388 SP 389
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 581 VLSLAFARDSDTLAAGSNDGKIKVWKVSTGKVQRKTGP 694
V SL + D +A G DG I + V GK+ R P
Sbjct: 67 VTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKP 104
>At4g19440.1 68417.m02860 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 825
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -3
Query: 643 FSIIRPSSQCVAIPRKSQAQHRFFHAHVLIMSLITQILTDFSRCK 509
F R QCV P KS+ H H + S++++ D+ +CK
Sbjct: 38 FHTSRYLQQCVHRPDKSEETSSDRHLHERLSSVLSKRSLDYEQCK 82
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 212 LPSQRPSPGRCPSYLVPSASTTGPGPQMATAP 307
+PS +P P PS VPS S P P+ T P
Sbjct: 47 VPSPKPKPVPSPS--VPSPSVPSPNPRPVTPP 76
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 426 SHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
S V C FS DG+ L + D V +WN++
Sbjct: 509 SKVICCSFSYDGKLLASAGHDKKVFIWNME 538
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 426 SHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
S V C FS DG+ L + D V +WN++
Sbjct: 511 SKVICCSFSYDGKLLASAGHDKKVFIWNME 540
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 426 SHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
S V C FS DG+ L + D V +WN++
Sbjct: 511 SKVICCSFSYDGKLLASAGHDKKVFIWNME 540
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 426 SHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
S V C FS DG+ L + D V +WN++
Sbjct: 511 SKVICCSFSYDGKLLASAGHDKKVFIWNME 540
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 426 SHVECARFSPDGQYLVTGSVDGVVEVWNLQ 515
S V C FS DG+ L + D V +WN++
Sbjct: 511 SKVICCSFSYDGKLLASAGHDKKVFIWNME 540
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 438 CARFSPDGQYLVTGSVDGVVEVW 506
CA +SP GQ L T S DG +W
Sbjct: 80 CA-WSPSGQLLATASFDGTTGIW 101
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 11/49 (22%)
Frame = +2
Query: 560 YMCME------EAVLSLAFARDSD-----TLAAGSNDGKIKVWKVSTGK 673
Y C+E + V SLA R+ + ++ +GS DG++K WKVS K
Sbjct: 359 YSCLEVLSGHTKPVKSLAAVREKELDDVVSIISGSLDGEVKCWKVSVTK 407
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 575 EAVLSLAFARDSDTLAAGSNDGKIKVWKVSTGK 673
+AV SLA ++D L + S D K+W+ S K
Sbjct: 193 DAVSSLALSQDGSLLYSASWDRSFKIWRTSDFK 225
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Frame = +2
Query: 215 PSQRPSPGRCPSYLVPSASTT------GPGPQMATAPGSAPS 322
P P P CPS P A T GP P+ A AP APS
Sbjct: 89 PPPAPKPVPCPSPPKPPAPTPKPVPPHGPPPKPAPAPTPAPS 130
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 584 LSLAFARDSDTLAAGSNDGKIKVWK 658
LSL+F +D LA G+ DG ++V++
Sbjct: 146 LSLSFNQDGTVLATGAEDGTLRVFE 170
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 584 LSLAFARDSDTLAAGSNDGKIKVWK 658
LSL+F +D LA G+ DG ++V++
Sbjct: 146 LSLSFNQDGTVLATGAEDGTLRVFE 170
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQY-LVTGSVDGVVEVWNLQR 518
G V C +SP + L + S DG + +W L R
Sbjct: 529 GHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR 563
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +3
Query: 294 WQQHQGLLPPGTTIDLFRGKAAIRDQEDDLCPTQLSKIIKFGQKSHVECARFSPDGQYLV 473
W++ GLLP + + F ED L L K + K V F+ DG L+
Sbjct: 19 WERELGLLPNRSFSNRFSAS------EDLLRRLGLDKKLD-KHKGCVNTVSFNADGDILL 71
Query: 474 TGSVDGVVEVWNLQ 515
+GS D V +W+ Q
Sbjct: 72 SGSDDRQVILWDWQ 85
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
G + V +F PDG TGS DG +++++ +++
Sbjct: 246 GHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQV 285
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
G + V +F PDG TGS DG +++++ +++
Sbjct: 184 GHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQV 223
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 423 KSHVECARFSPDGQYLVTGSVDGVVEVW 506
++ + C S DG L TGS D +++W
Sbjct: 279 RNRISCLGLSADGSALCTGSWDSNLKIW 306
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 417 GQKSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
G + V +F PDG TGS DG +++++ +++
Sbjct: 246 GHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQV 285
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 423 KSHVECARFSPDGQYLVTGSVDGVVEVW 506
++ + C S DG L TGS D +++W
Sbjct: 341 RNRISCLGLSADGSALCTGSWDSNLKIW 368
>At4g34110.1 68417.m04839 polyadenylate-binding protein 2 (PABP2)
non-consensus TA donor splice site at exon 2,
polyadenylate-binding protein - Triticum aestivum
(common wheat),PIR:T06979
Length = 443
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/61 (26%), Positives = 23/61 (37%)
Frame = +2
Query: 212 LPSQRPSPGRCPSYLVPSASTTGPGPQMATAPGSAPSRHHYRFVPW*SRNKRPRRRSLPH 391
+P RP G PS+ +P P PG +H + P + PR R +
Sbjct: 274 VPGMRPGGGPVPSFFMPMVQPQQQRPGGGRRPGGI--QHSQQQNPMMQQQMHPRGRMFRY 331
Query: 392 P 394
P
Sbjct: 332 P 332
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +2
Query: 215 PSQRPSPGRCPSY--LVPSASTTGPGPQMATAPGSAP 319
P PSPG P + PS T P P +PG +P
Sbjct: 413 PPTTPSPGGSPPSPSISPSPPITVPSPPTTPSPGGSP 449
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 515 TGKIRKDLR-YQAHDEYMCME-EAVLSLAFARDSDTLAAGSNDGKIKVWKVS 664
TG K++R ++ E+ + + L A + + G DGKI+VWKVS
Sbjct: 111 TGSDSKNIRVWKNLKEFSAFKCNSGLVKAIVISGEKIFTGHQDGKIRVWKVS 162
>At1g43780.1 68414.m05043 serine carboxypeptidase S10 family protein
similar to serine carboxylase II-3 GB:CAA55478 GI:474392
from [Hordeum vulgare]
Length = 479
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = -3
Query: 646 NFSIIRPSSQCVAIPRKSQAQHRFFHAHVLIMSLITQILTDFSRCKFQTSTTPSTEPVTK 467
N I + + + R A + FF +H +I + LT ++C F+ T + ++K
Sbjct: 211 NLKGIAIGNPLLKLDRDVPAIYEFFWSHGMISDELG--LTIMNQCDFEDYTFTDSHNISK 268
Query: 466 YCPSGENRA 440
C + N+A
Sbjct: 269 LCEAAVNQA 277
>At1g14370.1 68414.m01703 protein kinase (APK2a) identical to
protein kinase APK2a GI:2852447 from [Arabidopsis
thaliana]
Length = 426
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 434 HVGLLTEFDDLGQLGGAEIVFLVSYC 357
H LTE + LGQL +V LV YC
Sbjct: 134 HKEWLTEVNYLGQLSHPNLVLLVGYC 159
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 459 GQYLVTGSVDGVVEVWN 509
G+ L TGS DGVV +WN
Sbjct: 48 GKRLYTGSNDGVVRLWN 64
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +2
Query: 518 GKI-RKDLRYQAH--DEYMCMEEAVLSLAFARDSDTLAAGSNDGKIKVW 655
GKI D+R ++ + Y+ E V L ++ LA+G ND + +W
Sbjct: 197 GKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGKKLASGGNDNVVHIW 245
>At5g07500.1 68418.m00858 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 245
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 551 EPDNANPYGFFPL*IPNFNDAIYGA 477
+P NA Y P IPN +DAIYG+
Sbjct: 27 KPGNAGAYEIDPS-IPNIDDAIYGS 50
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 411 KFGQKSHVECAR---FSPDG-QYLVTGSVDGVVEVWNLQREKSVR 533
K G S EC FS G +Y+ +G +V++W+LQR+ ++
Sbjct: 85 KDGGDSAEECLSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIK 129
>At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repeat
(PF00400); 42% similarity to fimbriae-associated protein
Fap1 (gi:3929312) [Streptococcus parasanguinis]
Length = 994
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 423 KSHVECARFSPDGQYLVTGSVDGVVEVWNLQREKSVRI 536
+S V F+ G L+ G DG V VW++QR ++
Sbjct: 478 QSPVTSVCFNQIGSLLLAGYGDGHVTVWDMQRASIAKV 515
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 557 EYMCMEEAVLSLAFAR-DSDTLAAGSNDGKIKVW 655
EY E+ S+ F+R + L +GS+D K+KVW
Sbjct: 458 EYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVW 491
>At1g67000.1 68414.m07618 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 717
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 416 EFDDLGQLGGAEIVFLVSYCGFTTEQIY 333
E+D LG L G IVFLV C QI+
Sbjct: 321 EYDALGALTGVVIVFLVLLCPCFRVQIF 348
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,087,620
Number of Sequences: 28952
Number of extensions: 400271
Number of successful extensions: 2145
Number of sequences better than 10.0: 165
Number of HSP's better than 10.0 without gapping: 1519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2127
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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