Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30254
         (781 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   0.28 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    25   0.90 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   3.6  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.6  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   4.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.3  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   8.4  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect(2) = 0.28
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = -2

Query: 531 QWEVDTGVGTKLVWNSVRSTFRAPSNLKEAVIEETI 424
           +W  D  +G   VW   R  +  P  L+ +++   I
Sbjct: 707 KWSCDCDLGWVEVWERKRRQYLCPVLLRVSILRNII 742



 Score = 21.8 bits (44), Expect(2) = 0.28
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 627 LVGGLEACVCDLG 589
           L+GG  +C CDLG
Sbjct: 703 LMGGKWSCDCDLG 715


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 720 NRYHQNQAYYPIRRRCP 770
           NRY Q Q  YP  +RCP
Sbjct: 171 NRYWQCQGGYPRLQRCP 187


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 735 FDGSDCPRSHPWLRRHHGTAYS 670
           F   +CP ++PW+    G  +S
Sbjct: 511 FTCMECPNNYPWILEPTGDGFS 532


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -2

Query: 105 QRACGFCPKPNLRFPFQWCSDHGHSCW 25
           Q  C +   PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 735 FDGSDCPRSHPWLRRHHGTAYS 670
           F   +CP ++PW+    G  +S
Sbjct: 504 FTCMECPNNYPWILDPTGDGFS 525


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 30  NYARGHYTIGKEIVDLVLDRIRKLADQCTG 119
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 512  PVSTSHWSRTRQSSLPRRPT 571
            P +T+HW     +S   RPT
Sbjct: 1177 PSTTNHWQTKTTTSTTTRPT 1196



 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 371  YGGRCHRWLHC 339
            Y G C R+LHC
Sbjct: 1287 YPGDCTRYLHC 1297


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 433 LDHCFFEIRRRSECGPHRVPD*LGAYPRIHFPLV 534
           + H + E+    E GP   P+ L  +PR  F ++
Sbjct: 190 IQHGYLELVIPPENGPKMTPNHLHIWPRGQFMMI 223


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 433 LDHCFFEIRRRSECGPHRVPD*LGAYPRIHFPLV 534
           + H + E+    E GP   P+ L  +PR  F ++
Sbjct: 190 IQHGYLELVIPPENGPKMTPNHLHIWPRGQFMMI 223


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 433 LDHCFFEIRRRSECGPHRVPD*LGAYPRIHFPLV 534
           + H + E+    E GP   P+ L  +PR  F ++
Sbjct: 190 IQHGYLELVIPPENGPKMTPNHLHIWPRGQFMMI 223


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 344 EAIYDICRRNLDIERPTYTNLNRLIGQIV 430
           E I DIC R+ D       ++NR+ G I+
Sbjct: 510 EQIVDICIRSHDKLCDVCDSVNRIFGFII 538


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 698 NQGCERGQSLPSKPSVLSNSSTVS 769
           N   + G+  PS P + S SST S
Sbjct: 57  NSTLDPGRKSPSSPRISSPSSTKS 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,361
Number of Sequences: 336
Number of extensions: 4346
Number of successful extensions: 29
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)