Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30254
(781 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 96 9e-22
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 96 9e-22
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 96 9e-22
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 96 9e-22
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 26 1.5
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 25 2.6
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 25 3.5
AF513636-1|AAM53608.1| 222|Anopheles gambiae glutathione S-tran... 24 6.1
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 96.3 bits (229), Expect = 9e-22
Identities = 42/92 (45%), Positives = 59/92 (64%)
Frame = +2
Query: 239 LPRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 418
+P VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L+
Sbjct: 66 VPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLV 125
Query: 419 GQIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
+S +T LRF G LN DL + N+VP P
Sbjct: 126 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFP 157
Score = 50.0 bits (114), Expect = 8e-08
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +3
Query: 45 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 224
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 225 LEFAIYPAPQ 254
+++ P+P+
Sbjct: 61 NTYSVVPSPK 70
Score = 27.9 bits (59), Expect = 0.37
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 600
+PR+HF + +AP+ S + L+V E+T
Sbjct: 156 FPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 96.3 bits (229), Expect = 9e-22
Identities = 42/92 (45%), Positives = 59/92 (64%)
Frame = +2
Query: 239 LPRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 418
+P VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L+
Sbjct: 66 VPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLV 125
Query: 419 GQIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
+S +T LRF G LN DL + N+VP P
Sbjct: 126 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFP 157
Score = 50.0 bits (114), Expect = 8e-08
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +3
Query: 45 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 224
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 225 LEFAIYPAPQ 254
+++ P+P+
Sbjct: 61 NTYSVVPSPK 70
Score = 27.9 bits (59), Expect = 0.37
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 600
+PR+HF + +AP+ S + L+V E+T
Sbjct: 156 FPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 96.3 bits (229), Expect = 9e-22
Identities = 42/92 (45%), Positives = 59/92 (64%)
Frame = +2
Query: 239 LPRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 418
+P VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L+
Sbjct: 66 VPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLV 125
Query: 419 GQIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
+S +T LRF G LN DL + N+VP P
Sbjct: 126 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFP 157
Score = 50.0 bits (114), Expect = 8e-08
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +3
Query: 45 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 224
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 225 LEFAIYPAPQ 254
+++ P+P+
Sbjct: 61 NTYSVVPSPK 70
Score = 27.9 bits (59), Expect = 0.37
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 600
+PR+HF + +AP+ S + L+V E+T
Sbjct: 156 FPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 96.3 bits (229), Expect = 9e-22
Identities = 42/92 (45%), Positives = 59/92 (64%)
Frame = +2
Query: 239 LPRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 418
+P VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L+
Sbjct: 66 VPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLV 125
Query: 419 GQIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
+S +T LRF G LN DL + N+VP P
Sbjct: 126 SLTMSGVTTCLRFPGQLNADLRKLAVNMVPFP 157
Score = 50.0 bits (114), Expect = 8e-08
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +3
Query: 45 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 224
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 225 LEFAIYPAPQ 254
+++ P+P+
Sbjct: 61 NTYSVVPSPK 70
Score = 27.9 bits (59), Expect = 0.37
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 600
+PR+HF + +AP+ S + L+V E+T
Sbjct: 156 FPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.8 bits (54), Expect = 1.5
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 512 PVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATP 646
P +T+ WS + T+ + P+ + THA + T W + P
Sbjct: 168 PTTTTTWSDQPRPPTTTTTTVWTDPTATTTTHAPTTTTTWSDLPP 212
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 25.0 bits (52), Expect = 2.6
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +2
Query: 512 PVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATP 646
P +T+ WS T+ + P+ + THA + T W + P
Sbjct: 168 PTTTTTWSDQPPPPTTTTTTVWTDPTATTTTHAPTTTTTWSDLPP 212
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 24.6 bits (51), Expect = 3.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 557 PRRPTMNSFPSPRSQTHASSPP 622
P++P+ + P+P+ QT PP
Sbjct: 385 PQQPSRPTIPAPQQQTPPRQPP 406
>AF513636-1|AAM53608.1| 222|Anopheles gambiae glutathione
S-transferase D6 protein.
Length = 222
Score = 23.8 bits (49), Expect = 6.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 765 TVDELDSTLGFDGSDCPRSHPW 700
TV LD L FD S P H W
Sbjct: 168 TVAALDGLLNFDFSVYPNVHRW 189
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 861,303
Number of Sequences: 2352
Number of extensions: 19730
Number of successful extensions: 96
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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