Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30254
(781 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 157 6e-39
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 157 6e-39
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 155 2e-38
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 155 4e-38
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 155 4e-38
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 154 5e-38
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 154 5e-38
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 95 4e-20
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 95 4e-20
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 95 5e-20
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 95 5e-20
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 93 1e-19
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 93 2e-19
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 93 2e-19
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 93 2e-19
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 93 2e-19
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 71 7e-13
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 71 9e-13
At5g66840.1 68418.m08427 SAP domain-containing protein contains ... 30 1.5
At5g58300.1 68418.m07298 leucine-rich repeat transmembrane prote... 30 1.5
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.6
At4g30150.1 68417.m04287 expressed protein 28 6.0
At3g02120.1 68416.m00178 hydroxyproline-rich glycoprotein family... 28 8.0
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 157 bits (382), Expect = 6e-39
Identities = 71/91 (78%), Positives = 82/91 (90%)
Frame = +2
Query: 242 PRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 421
P VSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRLI
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLIS 232
Query: 422 QIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
QI+SS+T SLRFDGA+NVD+TEFQTNLVP P
Sbjct: 233 QIISSLTTSLRFDGAINVDITEFQTNLVPYP 263
Score = 130 bits (315), Expect = 8e-31
Identities = 60/84 (71%), Positives = 68/84 (80%)
Frame = +3
Query: 3 ITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXL 182
I+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+ L
Sbjct: 93 ISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Query: 183 LMERLSVDYGKKSKLEFAIYPAPQ 254
L+ERLSVDYGKKSKL F IYP+PQ
Sbjct: 153 LLERLSVDYGKKSKLGFTIYPSPQ 176
Score = 112 bits (269), Expect = 3e-25
Identities = 57/92 (61%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGQVHGLAVCCTV 687
YPRIHF L +YAPVISA KAYHEQLSV EITNA FEPA+ M KCDPRHG+ CC +
Sbjct: 262 YPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGK---YMACCLM 318
Query: 688 VTS--*PRM*TRAIATIKTKRTIQFVDGVQTG 777
P+ A+ TIKTKRT+QFVD TG
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTG 350
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 157 bits (382), Expect = 6e-39
Identities = 71/91 (78%), Positives = 82/91 (90%)
Frame = +2
Query: 242 PRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 421
P VSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRLI
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLIS 232
Query: 422 QIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
QI+SS+T SLRFDGA+NVD+TEFQTNLVP P
Sbjct: 233 QIISSLTTSLRFDGAINVDITEFQTNLVPYP 263
Score = 130 bits (315), Expect = 8e-31
Identities = 60/84 (71%), Positives = 68/84 (80%)
Frame = +3
Query: 3 ITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXL 182
I+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+ L
Sbjct: 93 ISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Query: 183 LMERLSVDYGKKSKLEFAIYPAPQ 254
L+ERLSVDYGKKSKL F IYP+PQ
Sbjct: 153 LLERLSVDYGKKSKLGFTIYPSPQ 176
Score = 112 bits (269), Expect = 3e-25
Identities = 57/92 (61%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGQVHGLAVCCTV 687
YPRIHF L +YAPVISA KAYHEQLSV EITNA FEPA+ M KCDPRHG+ CC +
Sbjct: 262 YPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGK---YMACCLM 318
Query: 688 VTS--*PRM*TRAIATIKTKRTIQFVDGVQTG 777
P+ A+ TIKTKRT+QFVD TG
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTG 350
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 155 bits (377), Expect = 2e-38
Identities = 78/141 (55%), Positives = 91/141 (64%)
Frame = +2
Query: 242 PRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 421
P VSTAVVEPYNS+L+TH+ LEH+D ++DNEAIYDICRR+LDIERPTY+NLNRLI
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLIS 232
Query: 422 QIVSSITASLRFDGALNVDLTEFQTNLVPTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQ 601
Q +SS+T SLRFDGA+NVD+TEFQTNLVP P S + F P
Sbjct: 233 QTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEIT 292
Query: 602 THASSPPTRW*NATPVMGKYM 664
T P P GKYM
Sbjct: 293 TSVFEPSNMMAKCDPRHGKYM 313
Score = 124 bits (298), Expect = 9e-29
Identities = 56/84 (66%), Positives = 67/84 (79%)
Frame = +3
Query: 3 ITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXL 182
I+GKEDAANN+ARGHYT+G+EIVD L+R+RKLAD CTGLQGFL+F+ L
Sbjct: 93 ISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Query: 183 LMERLSVDYGKKSKLEFAIYPAPQ 254
L+ERLSVD+GKKSKL F IYP+PQ
Sbjct: 153 LLERLSVDFGKKSKLGFTIYPSPQ 176
Score = 104 bits (250), Expect = 6e-23
Identities = 53/92 (57%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGQVHGLAVCCTV 687
YPRIHF L +YAPVIS+ KAYHEQ SV EIT + FEP+N M KCDPRHG+ CC +
Sbjct: 262 YPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKY---MACCLM 318
Query: 688 VTS*--PRM*TRAIATIKTKRTIQFVDGVQTG 777
P+ A+A IK KRTIQFVD TG
Sbjct: 319 YRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTG 350
Score = 35.9 bits (79), Expect = 0.030
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 645 PSWASTWACCMLYRGDVVTKDVN 713
P ACC++YRGDVV KDVN
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVN 329
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 155 bits (375), Expect = 4e-38
Identities = 68/91 (74%), Positives = 83/91 (91%)
Frame = +2
Query: 242 PRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 421
P VST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L+IERPTYTNLNRL+
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVS 232
Query: 422 QIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
Q++SS+TASLRFDGALNVD+TEFQTNLVP P
Sbjct: 233 QVISSLTASLRFDGALNVDVTEFQTNLVPYP 263
Score = 131 bits (316), Expect = 6e-31
Identities = 61/84 (72%), Positives = 68/84 (80%)
Frame = +3
Query: 3 ITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXL 182
I+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ L
Sbjct: 93 ISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Query: 183 LMERLSVDYGKKSKLEFAIYPAPQ 254
L+ERLSVDYGKKSKL F +YP+PQ
Sbjct: 153 LLERLSVDYGKKSKLGFTVYPSPQ 176
Score = 114 bits (275), Expect = 5e-26
Identities = 58/92 (63%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGQVHGLAVCCTV 687
YPRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHG+ CC +
Sbjct: 262 YPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGK---YMACCLM 318
Query: 688 VTS--*PRM*TRAIATIKTKRTIQFVDGVQTG 777
P+ A+ TIKTKRTIQFVD TG
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTG 350
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 155 bits (375), Expect = 4e-38
Identities = 68/91 (74%), Positives = 83/91 (91%)
Frame = +2
Query: 242 PRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 421
P VST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L+IERPTYTNLNRL+
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVS 232
Query: 422 QIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
Q++SS+TASLRFDGALNVD+TEFQTNLVP P
Sbjct: 233 QVISSLTASLRFDGALNVDVTEFQTNLVPYP 263
Score = 131 bits (316), Expect = 6e-31
Identities = 61/84 (72%), Positives = 68/84 (80%)
Frame = +3
Query: 3 ITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXL 182
I+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ L
Sbjct: 93 ISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Query: 183 LMERLSVDYGKKSKLEFAIYPAPQ 254
L+ERLSVDYGKKSKL F +YP+PQ
Sbjct: 153 LLERLSVDYGKKSKLGFTVYPSPQ 176
Score = 114 bits (275), Expect = 5e-26
Identities = 58/92 (63%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGQVHGLAVCCTV 687
YPRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHG+ CC +
Sbjct: 262 YPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGK---YMACCLM 318
Query: 688 VTS--*PRM*TRAIATIKTKRTIQFVDGVQTG 777
P+ A+ TIKTKRTIQFVD TG
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTG 350
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 154 bits (374), Expect = 5e-38
Identities = 68/91 (74%), Positives = 82/91 (90%)
Frame = +2
Query: 242 PRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 421
P VST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L IERPTYTNLNRL+
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVS 232
Query: 422 QIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
Q++SS+TASLRFDGALNVD+TEFQTNLVP P
Sbjct: 233 QVISSLTASLRFDGALNVDVTEFQTNLVPYP 263
Score = 131 bits (316), Expect = 6e-31
Identities = 61/84 (72%), Positives = 68/84 (80%)
Frame = +3
Query: 3 ITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXL 182
I+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ L
Sbjct: 93 ISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Query: 183 LMERLSVDYGKKSKLEFAIYPAPQ 254
L+ERLSVDYGKKSKL F +YP+PQ
Sbjct: 153 LLERLSVDYGKKSKLGFTVYPSPQ 176
Score = 114 bits (275), Expect = 5e-26
Identities = 58/92 (63%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGQVHGLAVCCTV 687
YPRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHG+ CC +
Sbjct: 262 YPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGK---YMACCLM 318
Query: 688 VTS--*PRM*TRAIATIKTKRTIQFVDGVQTG 777
P+ A+ TIKTKRTIQFVD TG
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTG 350
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 154 bits (374), Expect = 5e-38
Identities = 68/91 (74%), Positives = 82/91 (90%)
Frame = +2
Query: 242 PRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 421
P VST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L IERPTYTNLNRL+
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVS 232
Query: 422 QIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
Q++SS+TASLRFDGALNVD+TEFQTNLVP P
Sbjct: 233 QVISSLTASLRFDGALNVDVTEFQTNLVPYP 263
Score = 131 bits (316), Expect = 6e-31
Identities = 61/84 (72%), Positives = 68/84 (80%)
Frame = +3
Query: 3 ITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXL 182
I+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ L
Sbjct: 93 ISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Query: 183 LMERLSVDYGKKSKLEFAIYPAPQ 254
L+ERLSVDYGKKSKL F +YP+PQ
Sbjct: 153 LLERLSVDYGKKSKLGFTVYPSPQ 176
Score = 114 bits (275), Expect = 5e-26
Identities = 58/92 (63%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGQVHGLAVCCTV 687
YPRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHG+ CC +
Sbjct: 262 YPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGK---YMACCLM 318
Query: 688 VTS--*PRM*TRAIATIKTKRTIQFVDGVQTG 777
P+ A+ TIKTKRTIQFVD TG
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTG 350
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 95.5 bits (227), Expect = 4e-20
Identities = 43/91 (47%), Positives = 59/91 (64%)
Frame = +2
Query: 242 PRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 421
P VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI
Sbjct: 172 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLIS 231
Query: 422 QIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
+S +T SLRF G LN DL + NL+P P
Sbjct: 232 ATMSGVTCSLRFPGQLNSDLRKLAVNLIPFP 262
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +3
Query: 3 ITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXL 182
+ G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H L
Sbjct: 92 VFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTL 151
Query: 183 LMERLSVDYGKKSKLEFAIYPAPQ 254
L+ ++ +Y + L F+++P+P+
Sbjct: 152 LISKIREEYPDRMMLTFSVFPSPK 175
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGQ 657
+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+
Sbjct: 261 FPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGR 310
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 95.5 bits (227), Expect = 4e-20
Identities = 43/91 (47%), Positives = 59/91 (64%)
Frame = +2
Query: 242 PRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 421
P VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI
Sbjct: 172 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLIS 231
Query: 422 QIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
+S +T SLRF G LN DL + NL+P P
Sbjct: 232 ATMSGVTCSLRFPGQLNSDLRKLAVNLIPFP 262
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +3
Query: 3 ITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXL 182
+ G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H L
Sbjct: 92 VFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTL 151
Query: 183 LMERLSVDYGKKSKLEFAIYPAPQ 254
L+ ++ +Y + L F+++P+P+
Sbjct: 152 LISKIREEYPDRMMLTFSVFPSPK 175
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGQ 657
+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+
Sbjct: 261 FPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGR 310
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 95.1 bits (226), Expect = 5e-20
Identities = 43/91 (47%), Positives = 58/91 (63%)
Frame = +2
Query: 242 PRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 421
P VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN LI
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLIS 230
Query: 422 QIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
+S +T LRF G LN DL + NL+P P
Sbjct: 231 ATMSGVTCCLRFPGQLNSDLRKLAVNLIPFP 261
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +3
Query: 3 ITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXL 182
+ G+ A NN+A+GHYT G E++D VLD +RK A+ LQGF + H L
Sbjct: 91 VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTL 150
Query: 183 LMERLSVDYGKKSKLEFAIYPAPQ 254
L+ ++ +Y + + F+++P+P+
Sbjct: 151 LISKIREEYPDRMMMTFSVFPSPK 174
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGQ 657
+PR+HF +V +AP+ S + LSV E+T ++ N M DPRHG+
Sbjct: 260 FPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGR 309
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 95.1 bits (226), Expect = 5e-20
Identities = 43/91 (47%), Positives = 58/91 (63%)
Frame = +2
Query: 242 PRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 421
P VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN LI
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLIS 230
Query: 422 QIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
+S +T LRF G LN DL + NL+P P
Sbjct: 231 ATMSGVTCCLRFPGQLNSDLRKLAVNLIPFP 261
Score = 71.3 bits (167), Expect = 7e-13
Identities = 30/84 (35%), Positives = 50/84 (59%)
Frame = +3
Query: 3 ITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXL 182
+ G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H L
Sbjct: 91 VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTL 150
Query: 183 LMERLSVDYGKKSKLEFAIYPAPQ 254
L+ ++ +Y + + F+++P+P+
Sbjct: 151 LISKIREEYPDRMMMTFSVFPSPK 174
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGQ 657
+PR+HF +V +AP+ S + LSV E+T ++ N M DPRHG+
Sbjct: 260 FPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGR 309
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 93.5 bits (222), Expect = 1e-19
Identities = 42/91 (46%), Positives = 58/91 (63%)
Frame = +2
Query: 242 PRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 421
P VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLIS 230
Query: 422 QIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
+S +T LRF G LN DL + NL+P P
Sbjct: 231 ATMSGVTCCLRFPGQLNSDLRKLAVNLIPFP 261
Score = 71.3 bits (167), Expect = 7e-13
Identities = 30/84 (35%), Positives = 50/84 (59%)
Frame = +3
Query: 3 ITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXL 182
+ G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H L
Sbjct: 91 VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTL 150
Query: 183 LMERLSVDYGKKSKLEFAIYPAPQ 254
L+ ++ +Y + + F+++P+P+
Sbjct: 151 LISKIREEYPDRMMMTFSVFPSPK 174
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGQ 657
+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+
Sbjct: 260 FPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADPRHGR 309
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/91 (46%), Positives = 58/91 (63%)
Frame = +2
Query: 242 PRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 421
P VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLIS 230
Query: 422 QIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
+S +T LRF G LN DL + NL+P P
Sbjct: 231 ATMSGVTCCLRFPGQLNSDLRKLAVNLIPFP 261
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +3
Query: 3 ITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXL 182
+ G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H L
Sbjct: 91 VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTL 150
Query: 183 LMERLSVDYGKKSKLEFAIYPAPQ 254
L+ ++ +Y + L F+++P+P+
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSPK 174
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGQ 657
+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+
Sbjct: 260 FPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGR 309
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/91 (46%), Positives = 58/91 (63%)
Frame = +2
Query: 242 PRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 421
P VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLIS 230
Query: 422 QIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
+S +T LRF G LN DL + NL+P P
Sbjct: 231 ATMSGVTCCLRFPGQLNSDLRKLAVNLIPFP 261
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +3
Query: 3 ITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXL 182
+ G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H L
Sbjct: 91 VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTL 150
Query: 183 LMERLSVDYGKKSKLEFAIYPAPQ 254
L+ ++ +Y + L F+++P+P+
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSPK 174
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGQ 657
+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+
Sbjct: 260 FPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGR 309
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/91 (46%), Positives = 58/91 (63%)
Frame = +2
Query: 242 PRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 421
P VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLIS 230
Query: 422 QIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
+S +T LRF G LN DL + NL+P P
Sbjct: 231 ATMSGVTCCLRFPGQLNSDLRKLAVNLIPFP 261
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +3
Query: 3 ITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXL 182
+ G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H L
Sbjct: 91 VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTL 150
Query: 183 LMERLSVDYGKKSKLEFAIYPAPQ 254
L+ ++ +Y + L F+++P+P+
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSPK 174
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGQ 657
+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+
Sbjct: 260 FPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGR 309
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/91 (46%), Positives = 58/91 (63%)
Frame = +2
Query: 242 PRASVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 421
P VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLIS 230
Query: 422 QIVSSITASLRFDGALNVDLTEFQTNLVPTP 514
+S +T LRF G LN DL + NL+P P
Sbjct: 231 ATMSGVTCCLRFPGQLNSDLRKLAVNLIPFP 261
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +3
Query: 3 ITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXL 182
+ G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H L
Sbjct: 91 VFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTL 150
Query: 183 LMERLSVDYGKKSKLEFAIYPAPQ 254
L+ ++ +Y + L F+++P+P+
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSPK 174
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +1
Query: 508 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGQ 657
+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+
Sbjct: 260 FPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGR 309
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 71.3 bits (167), Expect = 7e-13
Identities = 32/86 (37%), Positives = 50/86 (58%)
Frame = +2
Query: 257 STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSS 436
S VV+PYNS+LT ++DC ++DN A+ I L + PT+ N L+ ++S+
Sbjct: 179 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSA 238
Query: 437 ITASLRFDGALNVDLTEFQTNLVPTP 514
T +LR+ G +N DL +L+PTP
Sbjct: 239 STTTLRYPGYMNNDLVGLLASLIPTP 264
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +3
Query: 21 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 200
A NN+A G++ GK + + ++D I + AD L+GF++ H L+E L+
Sbjct: 100 AGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLN 158
Query: 201 VDYGKKSKLEFAIYP 245
Y KK ++++P
Sbjct: 159 DRYSKKLVQTYSVFP 173
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 70.9 bits (166), Expect = 9e-13
Identities = 32/86 (37%), Positives = 50/86 (58%)
Frame = +2
Query: 257 STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSS 436
S VV+PYNS+LT ++DC ++DN A+ I L + PT+ N L+ ++S+
Sbjct: 179 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSA 238
Query: 437 ITASLRFDGALNVDLTEFQTNLVPTP 514
T +LR+ G +N DL +L+PTP
Sbjct: 239 STTTLRYPGYMNNDLVGLLASLIPTP 264
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +3
Query: 21 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 200
A NN+A G++ GK + + ++D I + AD L+GF++ H L+E L+
Sbjct: 100 AGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLN 158
Query: 201 VDYGKKSKLEFAIYP 245
Y KK ++++P
Sbjct: 159 DRYSKKLVQTYSVFP 173
>At5g66840.1 68418.m08427 SAP domain-containing protein contains
Pfam domain PF02037: SAP domain
Length = 551
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 491 QTNLVPTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPP 622
QTN P P S ++ ++ Q++ P ++P+ ++QT+ PP
Sbjct: 389 QTNQRPPPASYTYSTQQNQTNQRPPPASYTYPTQQNQTNQRPPP 432
>At5g58300.1 68418.m07298 leucine-rich repeat transmembrane protein
kinase, putative
Length = 654
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = +2
Query: 407 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPTPVSTSHWSRTRQSSLPRRPTMNSFP 586
N+L G + + T SLR N L + + S+S T LP +P S P
Sbjct: 192 NKLSGPVPNLDTVSLRRLNLSNNHLNGSIPSALGGFPSSSFSGNTLLCGLPLQPCATSSP 251
Query: 587 SPRSQTHASSPP 622
P H S+PP
Sbjct: 252 PPSLTPHISTPP 263
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 164 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 66
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At4g30150.1 68417.m04287 expressed protein
Length = 2009
Score = 28.3 bits (60), Expect = 6.0
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = +2
Query: 227 GVRHLPRASVSTAVVEPYNSILTTHTTLEHSDCAFMVD-NEAIYDIC-RRNL--DIERPT 394
G RH+ + S V+EP++ L TH T ++ C F+ E D+ NL D +
Sbjct: 287 GDRHVLK--FSCLVLEPFSRFLMTHPTTKNGFCDFLDKLFEPFMDVLGLLNLIEDKNKDL 344
Query: 395 YTNLNRLIGQIVS-SITASLRFDGALNV 475
+L RLI I+S ++ S DG L +
Sbjct: 345 EISLLRLIEDILSLALFHSAHIDGFLGL 372
>At3g02120.1 68416.m00178 hydroxyproline-rich glycoprotein family
protein
Length = 126
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 485 EFQTNLVPTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPP 622
E Q + + TP+ T H R +S P FP S+ H S PP
Sbjct: 2 ELQQSNLETPLKTQHDHRKITTSNPESSPPRPFPE-SSRKHDSPPP 46
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,061,531
Number of Sequences: 28952
Number of extensions: 407868
Number of successful extensions: 1356
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1746037600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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