Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30252
         (724 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035556-1|AAH35556.1|  538|Homo sapiens dolichol kinase protein.      31   3.2  
AY358759-1|AAQ89119.1|  538|Homo sapiens TREC2422 protein.             31   3.2  
AL672142-9|CAI10844.1|  538|Homo sapiens dolichol kinase protein.      31   3.2  
AB029017-1|BAA83046.2|  544|Homo sapiens KIAA1094 protein protein.     31   3.2  

>BC035556-1|AAH35556.1|  538|Homo sapiens dolichol kinase protein.
          Length = 538

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 130 CPPPPPGVGDATTTATTSEMRAILAYILLVSAGLIQ*YTWSVV 2
           CP P PG G   + +  +E   + A +L + A +   Y+W  V
Sbjct: 5   CPSPAPGPGAPLSGSVLAEAAVVFAVVLSIHATVWDRYSWCAV 47


>AY358759-1|AAQ89119.1|  538|Homo sapiens TREC2422 protein.
          Length = 538

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 130 CPPPPPGVGDATTTATTSEMRAILAYILLVSAGLIQ*YTWSVV 2
           CP P PG G   + +  +E   + A +L + A +   Y+W  V
Sbjct: 5   CPSPAPGPGAPLSGSVLAEAAVVFAVVLSIHATVWDRYSWCAV 47


>AL672142-9|CAI10844.1|  538|Homo sapiens dolichol kinase protein.
          Length = 538

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 130 CPPPPPGVGDATTTATTSEMRAILAYILLVSAGLIQ*YTWSVV 2
           CP P PG G   + +  +E   + A +L + A +   Y+W  V
Sbjct: 5   CPSPAPGPGAPLSGSVLAEAAVVFAVVLSIHATVWDRYSWCAV 47


>AB029017-1|BAA83046.2|  544|Homo sapiens KIAA1094 protein protein.
          Length = 544

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 130 CPPPPPGVGDATTTATTSEMRAILAYILLVSAGLIQ*YTWSVV 2
           CP P PG G   + +  +E   + A +L + A +   Y+W  V
Sbjct: 11  CPSPAPGPGAPLSGSVLAEAAVVFAVVLSIHATVWDRYSWCAV 53


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,169,785
Number of Sequences: 237096
Number of extensions: 1036188
Number of successful extensions: 5070
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5037
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)