Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30250
         (770 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    25   0.67 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   4.7  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   6.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   6.2  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   6.2  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 219 PLTRTTQGIPTGRCVFPKYRPSRYP 293
           P T    G P  RC   K++P+R P
Sbjct: 94  PQTSAPTGPPIVRCALRKHKPNRKP 118


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/49 (28%), Positives = 19/49 (38%)
 Frame = -2

Query: 685  TSSVEPLNFLSGCVFNGTNGARQPRERLYPPFTTSPSRISCWYLLSPVW 539
            T   EP+      V  G +      E ++P +TT PS        SP W
Sbjct: 1004 TKPPEPVTPAPPQVTTGVDTGASSTEHMHPDWTTKPSTWWSSTTTSPWW 1052


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/49 (24%), Positives = 20/49 (40%)
 Frame = -2

Query: 742 NCAGEIGPPPCFENPGS*ITSSVEPLNFLSGCVFNGTNGARQPRERLYP 596
           NC      P C +  G     S+     L+G   +G++ + QP  +  P
Sbjct: 210 NCEDPEDVPGCEDYYGDLDLKSIRKSELLAGLQSSGSSRSHQPATKSKP 258


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 505 PNMLSNTKLKIPTPVTISTSTR 570
           P  LSN    I  P++IST  R
Sbjct: 30  PENLSNKSNSITVPLSISTGQR 51


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +2

Query: 680 GSYSTSGVFKARRGANFTSTVHHHLKLLL 766
           G   T G  K     N    +HHHL  L+
Sbjct: 488 GPVETKGTNKQLNTLNKICALHHHLSKLV 516


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +2

Query: 680 GSYSTSGVFKARRGANFTSTVHHHLKLLL 766
           G   T G  K     N    +HHHL  L+
Sbjct: 213 GPVETKGTNKQLNTLNKICALHHHLSKLV 241


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,677
Number of Sequences: 336
Number of extensions: 3687
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)