Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30249
(722 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26182| Best HMM Match : Glycolytic (HMM E-Value=0) 150 1e-36
SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0) 132 3e-31
SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26) 34 0.13
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 34 0.13
SB_21738| Best HMM Match : YTH (HMM E-Value=3.9e-06) 31 0.72
SB_17144| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_59586| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_47366| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_4248| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17) 29 3.8
SB_58036| Best HMM Match : Cadherin (HMM E-Value=0) 29 3.8
SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_28990| Best HMM Match : YABBY (HMM E-Value=0.45) 29 5.0
SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32) 28 6.7
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_15525| Best HMM Match : Galactosyl_T (HMM E-Value=1.1e-31) 28 6.7
SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_26114| Best HMM Match : CPSase_L_D3 (HMM E-Value=1.8) 28 6.7
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_26182| Best HMM Match : Glycolytic (HMM E-Value=0)
Length = 949
Score = 150 bits (363), Expect = 1e-36
Identities = 76/125 (60%), Positives = 88/125 (70%)
Frame = +1
Query: 253 HTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKA 432
+TPS A++ENANVLARYASICQ +VPIVEPEVL DG+H L+RAQKVTE VL+A YKA
Sbjct: 155 YTPSELAMKENANVLARYASICQQNGLVPIVEPEVLCDGDHTLERAQKVTEAVLSATYKA 214
Query: 433 LNDHHVYLEGTLLKPNMVTAGQSCKRRTLPTTSRAPTLTALLPHXXXXXXXXXXXXPGGQ 612
L DHH+YLEGTLLKPNMVTAGQSC + P T+TA L GGQ
Sbjct: 215 LMDHHIYLEGTLLKPNMVTAGQSCPTKYTPEQCAQATVTA-LARTVPPAMPGVTFLSGGQ 273
Query: 613 FQEEA 627
+E+A
Sbjct: 274 SEEQA 278
Score = 131 bits (316), Expect = 6e-31
Identities = 88/228 (38%), Positives = 112/228 (49%), Gaps = 2/228 (0%)
Frame = +2
Query: 5 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE-DECTTQGLDDLA 181
ISGVILFHET+YQKADDGTP V LL +GIIPGIKVDKGVV L G++ E TTQGLD L
Sbjct: 71 ISGVILFHETVYQKADDGTPFVRLLRDQGIIPGIKVDKGVVVLAGTDAGETTTQGLDGLG 130
Query: 182 QRCAQ**KDGCHFAKWRCVLKIGRTPPRTKLSRKTPMFSPATLPSV-RANASCRLSSPKS 358
+RCAQ KDGC FAKWRCVLKI P ++L+ K A S+ + N + P+
Sbjct: 131 ERCAQYKKDGCDFAKWRCVLKITDYTP-SELAMKENANVLARYASICQQNGLVPIVEPEV 189
Query: 359 YLMASTTWTAPRR*LRSFWPPXXXXXXXXXXXSRGHSSSPTW*RPVXXXXXXXXXXXXXX 538
T ++ + G P
Sbjct: 190 LCDGDHTLERAQKVTEAVLSATYKALMDHHIYLEGTLLKPNMVTAGQSCPTKYTPEQCAQ 249
Query: 539 XXXXXXXXTVPAAVPGVNVPLRVANSKKKPSVHLKRLSNAVGPSKRPW 682
TVP A+PGV L S+++ ++HL ++ G K+PW
Sbjct: 250 ATVTALARTVPPAMPGVTF-LSGGQSEEQATIHLNAINQYQG--KKPW 294
>SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0)
Length = 304
Score = 132 bits (319), Expect = 3e-31
Identities = 62/80 (77%), Positives = 70/80 (87%)
Frame = +1
Query: 253 HTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKA 432
+TPS A++ENANVLARYASICQ +VPIVEPEVL DG+H L+RAQKVTE VL+A YKA
Sbjct: 155 YTPSELAMKENANVLARYASICQQNGLVPIVEPEVLCDGDHTLERAQKVTEAVLSATYKA 214
Query: 433 LNDHHVYLEGTLLKPNMVTA 492
L DHH+YLEGTLLKPNMVTA
Sbjct: 215 LMDHHIYLEGTLLKPNMVTA 234
Score = 129 bits (312), Expect = 2e-30
Identities = 63/82 (76%), Positives = 68/82 (82%), Gaps = 1/82 (1%)
Frame = +2
Query: 5 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE-DECTTQGLDDLA 181
ISGVILFHET+YQKADDGTP V LL +GIIPGIKVDKGVV L G++ E TTQGLD L
Sbjct: 71 ISGVILFHETVYQKADDGTPFVRLLRDQGIIPGIKVDKGVVVLAGTDAGETTTQGLDGLG 130
Query: 182 QRCAQ**KDGCHFAKWRCVLKI 247
+RCAQ KDGC FAKWRCVLKI
Sbjct: 131 ERCAQYKKDGCDFAKWRCVLKI 152
>SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26)
Length = 687
Score = 33.9 bits (74), Expect = 0.13
Identities = 28/87 (32%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Frame = +1
Query: 28 RDPLPEG*RWNASGLPAGEEGHHPRHQGR---QGCRPAVRIGRRMHHPGSGRPRPALRPV 198
R P G + G P E G P GR + RP +GR H PG P P
Sbjct: 359 RPPHEPGRPPHEPGRPPHEPGRPPYEPGRPPHEPGRPPHELGRPPHEPGRPPHEPGRLPH 418
Query: 199 IEGRLPLRQVALRAEDRPHTPSYQAIQ 279
GR P Q PH S+QA +
Sbjct: 419 EPGRPPYEQ-----RRPPHEKSWQAFE 440
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Frame = +1
Query: 28 RDPLPEG*RWNASGLPAGEEGHHPRHQGR---QGCRPAVRIGRRMHHPGSGRPRPALRPV 198
R P G + G P E G P GR + RP GR H PG P P
Sbjct: 324 RPPYEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPY 383
Query: 199 IEGRLP 216
GR P
Sbjct: 384 EPGRPP 389
Score = 27.9 bits (59), Expect = 8.8
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Frame = +1
Query: 28 RDPLPEG*RWNASGLPAGEEGHHPRHQGR---QGCRPAVRIGRRMHHPGSGRPRPALRPV 198
R P G + G P E G P GR + RP GR H PG P P
Sbjct: 331 RPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPYEPGRPPH 390
Query: 199 IEGRLP 216
GR P
Sbjct: 391 EPGRPP 396
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 33.9 bits (74), Expect = 0.13
Identities = 28/87 (32%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Frame = +1
Query: 28 RDPLPEG*RWNASGLPAGEEGHHPRHQGR---QGCRPAVRIGRRMHHPGSGRPRPALRPV 198
R P G + G P E G P GR + RP +GR H PG P P
Sbjct: 125 RPPHEPGRPPHEPGRPPHEPGRPPYEPGRPPHEPGRPPHELGRPPHEPGRPPHEPGRLPH 184
Query: 199 IEGRLPLRQVALRAEDRPHTPSYQAIQ 279
GR P Q PH S+QA +
Sbjct: 185 EPGRPPYEQ-----RRPPHEKSWQAFE 206
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Frame = +1
Query: 28 RDPLPEG*RWNASGLPAGEEGHHPRHQGR---QGCRPAVRIGRRMHHPGSGRPRPALRPV 198
R P G + G P E G P GR + RP GR H PG P P
Sbjct: 90 RPPYEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPY 149
Query: 199 IEGRLP 216
GR P
Sbjct: 150 EPGRPP 155
Score = 27.9 bits (59), Expect = 8.8
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Frame = +1
Query: 28 RDPLPEG*RWNASGLPAGEEGHHPRHQGR---QGCRPAVRIGRRMHHPGSGRPRPALRPV 198
R P G + G P E G P GR + RP GR H PG P P
Sbjct: 97 RPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPYEPGRPPH 156
Query: 199 IEGRLP 216
GR P
Sbjct: 157 EPGRPP 162
>SB_21738| Best HMM Match : YTH (HMM E-Value=3.9e-06)
Length = 183
Score = 31.5 bits (68), Expect = 0.72
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +3
Query: 453 PRGDTPQAQHGDGRSVVQETYTPNDVARANVNRPSSAPCPPQFPELTFLSGWPIP 617
P G++ + QHG G Q P A + P P P Q T L +P P
Sbjct: 72 PEGNSGKWQHGIGPVTQQPAVYPTVYAPHAASMPIPVPVPAQHSRQTLLQAYPRP 126
>SB_17144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 412 ERPQSPSGRGPGRARHQVRLRARQSARCVGS 320
ERP + R PGR RHQ ++Q C+ S
Sbjct: 154 ERPYTSKKRRPGRPRHQATTSSKQPISCLTS 184
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = -2
Query: 610 GH--PERNVNSGNC-GGHGAEEGRLTLARATSLGVYVSCTTDRPSPCWA*GVSPRGTRGG 440
GH PE + N+ C G A ++ + G + + TT P+ C A P GTR
Sbjct: 2218 GHECPEGSPNAVPCLAGFYAPHAQMAACKMCPQGFFCNGTTITPTDCPAGHYCPNGTRFH 2277
Query: 439 RSAPC 425
PC
Sbjct: 2278 NQFPC 2282
>SB_59586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 5 ISGVILFHETLYQKADDGTPLVSLLEKK 88
+SG ++ +E L+Q DD TPLV +L ++
Sbjct: 103 LSGSVVSNEWLHQLMDDSTPLVQILAER 130
>SB_47366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 457 EGTLLKPNMVTAGQSCKRRTLPTTSRAPT 543
E L+KP MVTAG C + P S PT
Sbjct: 143 EVMLVKPQMVTAGIDCDKLIAPVMSLIPT 171
>SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1168
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -1
Query: 269 WYEGVCGRSSARNATWRSGSRPSITGRSAGRGRPDPGWCIRL 144
+Y+ V G SS R TW S + S R+ GR +PG C RL
Sbjct: 654 YYDKVTGVSSFR-ITWTS--KASANQRAGRAGRVEPGHCYRL 692
>SB_4248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 112 RQGCRPAVRIGRRMHHPGSGRPRPALRPVIEGRLP-LRQVALRAEDRPHTPSYQAIQENA 288
++G + R + + HP + R P+L VI GR P L Q +E H +Y+A+
Sbjct: 8 KKGNAYSTRYSQAVTHPSTNRALPSLTSVI-GREPVLFQCTRYSEAVTHPSTYRALLSIN 66
Query: 289 NVLARYASICQ 321
+V+ R + Q
Sbjct: 67 SVIGREPVLSQ 77
>SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17)
Length = 1850
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +3
Query: 135 SDRKTNAPPRVWTTSPSAAPSNRRTAATSPS--GVAC*RSAAHPLVPSYPGKRQCSRPLR 308
++R+T AP P P+ RRT A P ++ A + P P KR+ S P
Sbjct: 1469 AERRTPAPDPAERRVPPPFPAERRTPAPDPGERQISSPFPAERRIPPLDPAKRRVSPPFP 1528
Query: 309 FHLSEPT 329
PT
Sbjct: 1529 AERRTPT 1535
>SB_58036| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 6074
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 195 WAQRWARSSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSR 73
WAQ ++ SS PW S + SGT S+L ++ +S +
Sbjct: 5909 WAQNYSSSSSPWAPSSPASVRSGTYS-SSLATDILDTYSQK 5948
>SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2346
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +1
Query: 199 IEGRLPLRQVALRAEDRPHTPSYQAIQENANV 294
++ LPLR++++ + D+PH + + N+NV
Sbjct: 560 VDKYLPLRKISICSSDKPHYINLEMTHRNSNV 591
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2
Query: 412 ERPQSPSGRGPGRARHQVRLRARQSARCVGSDRWKRSGREHWRFP 278
ERP SGRG R R + R+ R DR R G+ R P
Sbjct: 1039 ERPYKQSGRGERNDRRGERYQDRREQREREEDREPRDGKGRQRQP 1083
>SB_28990| Best HMM Match : YABBY (HMM E-Value=0.45)
Length = 853
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 558 SAPCPPQFPELTFLSGWPIPRRSLRCT 638
SAP P F F+ G+P PRRS CT
Sbjct: 308 SAPLLPLFCMPLFIIGFPRPRRSWPCT 334
>SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32)
Length = 1074
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Frame = +1
Query: 55 WNASGLPAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGR---PRPALRPVIEGRLP 216
W G+P G P GR G P G + G+ PRP +RP GR+P
Sbjct: 515 WRPGGIPGRTPGRRPG--GRPGNIPPFVPGLIIPSRRPGKRPGPRPGIRPGRGGRIP 569
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 141 RKTNAPPRVWTTSPSAAPSNRRTAATSPSGVAC*RSAAHP--LVPSYPGKRQC 293
+ T A PR T SA P + T+ P G C HP + Y G+++C
Sbjct: 342 KPTTAKPRPQT---SARPRPQTTSRPQPQGAQCGAERCHPAGVCIVYQGRQEC 391
>SB_15525| Best HMM Match : Galactosyl_T (HMM E-Value=1.1e-31)
Length = 522
Score = 28.3 bits (60), Expect = 6.7
Identities = 22/69 (31%), Positives = 29/69 (42%)
Frame = +2
Query: 215 HFAKWRCVLKIGRTPPRTKLSRKTPMFSPATLPSVRANASCRLSSPKSYLMASTTWTAPR 394
H R KI R P K R T + + A P++ ++ SSP S + T
Sbjct: 97 HLTPRRTRKKIMRLLP--KKVRTTAISTSAFQPTINSSLLDINSSPNSSSILHVPPTLDT 154
Query: 395 R*LRSFWPP 421
R L FWPP
Sbjct: 155 RILNQFWPP 163
>SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/61 (39%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = -2
Query: 535 RATSLGVYVSCTTDR---PSPCWA*GVSPRGTRGGRSAPCTRRPERPQSPSGR--GPGRA 371
RA S G ++ R PS SP GTRG S P R P P GR PG A
Sbjct: 687 RANSPGPSINSPRGRAESPSNAHGRASSPSGTRGPVSGPSGARGS-PHQPRGRASSPGGA 745
Query: 370 R 368
R
Sbjct: 746 R 746
>SB_26114| Best HMM Match : CPSase_L_D3 (HMM E-Value=1.8)
Length = 382
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +1
Query: 115 QGCR--PAVRIGRR--MHHPGSGRPRPALRPVIEGRLPLRQVALRAEDRPHTPSYQAIQE 282
+GC P++ + R +HH S R V+E + R+ L + H P+ Q
Sbjct: 58 EGCANGPSIHMVERDGIHHSDSETQRELALSVVEQAIWSRKSNLGNSRKQHVPATQVATY 117
Query: 283 NANVLA 300
NANV A
Sbjct: 118 NANVEA 123
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 421 VYKALNDHHVYLEGTLLK-PNMVTAGQSCKRRTLPTTSRAPTLTA 552
V++ L +H V+ E K P+ +S KRRT +T+R P + A
Sbjct: 5875 VHRLLEEHKVFQEEMAKKQPSYDRLTKSAKRRTNGSTTRTPEVKA 5919
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 138 DRKT-NAPPRVWTTSPSAAPSNRRTAATSPSGVAC*RSAAHPLVPSYPGKRQCSRP 302
DRK ++PPR SPS P RR + SPS R PS P +R+ P
Sbjct: 876 DRKRYDSPPRRRRRSPSPPPRRRRRDSYSPS-----RRRRDSPTPSPPPRRRRKSP 926
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,442,077
Number of Sequences: 59808
Number of extensions: 627043
Number of successful extensions: 2275
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2245
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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