Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30249
(722 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putativ... 125 3e-29
At5g03690.2 68418.m00329 fructose-bisphosphate aldolase, putativ... 119 2e-27
At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putativ... 119 2e-27
At2g36460.1 68415.m04475 fructose-bisphosphate aldolase, putativ... 116 1e-26
At4g26520.1 68417.m03820 fructose-bisphosphate aldolase, cytopla... 116 2e-26
At3g52930.1 68416.m05834 fructose-bisphosphate aldolase, putativ... 115 3e-26
At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putativ... 97 1e-20
At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putativ... 97 1e-20
At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putativ... 95 4e-20
At2g01140.1 68415.m00023 fructose-bisphosphate aldolase, putativ... 91 7e-19
At5g07540.2 68418.m00864 glycine-rich protein (GRP16) oleosin; g... 32 0.33
At1g72080.1 68414.m08332 hypothetical protein 31 0.58
At5g58190.2 68418.m07284 expressed protein contains Pfam profile... 30 1.4
At2g44980.2 68415.m05601 transcription regulatory protein SNF2, ... 30 1.4
At2g44980.1 68415.m05600 transcription regulatory protein SNF2, ... 30 1.4
At4g03620.1 68417.m00497 myosin heavy chain-related contains wea... 29 4.1
At3g24715.1 68416.m03103 octicosapeptide/Phox/Bem1p (PB1) domain... 29 4.1
At1g56080.1 68414.m06439 expressed protein 29 4.1
At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger) fa... 29 4.1
At3g30300.1 68416.m03826 expressed protein contains Pfam PF03138... 28 5.5
At2g43970.2 68415.m05468 La domain-containing protein contains P... 28 5.5
At2g43970.1 68415.m05467 La domain-containing protein contains P... 28 5.5
At4g02430.2 68417.m00330 pre-mRNA splicing factor, putative / SR... 28 7.2
At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid t... 28 7.2
At5g58190.1 68418.m07283 expressed protein contains Pfam profile... 27 9.5
At5g09570.1 68418.m01108 expressed protein contains Pfam domain,... 27 9.5
At4g19510.2 68417.m02870 disease resistance protein (TIR-NBS-LRR... 27 9.5
At4g19510.1 68417.m02869 disease resistance protein (TIR-NBS-LRR... 27 9.5
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 27 9.5
>At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putative
strong similarity to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 125 bits (301), Expect = 3e-29
Identities = 70/123 (56%), Positives = 77/123 (62%)
Frame = +1
Query: 259 PSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALN 438
PS +IQENA LARYA ICQ +VPIVEPEVL DG HD+ + VTE VLAAVYKALN
Sbjct: 154 PSELSIQENAKGLARYAIICQENGLVPIVEPEVLTDGSHDIKKCAAVTETVLAAVYKALN 213
Query: 439 DHHVYLEGTLLKPNMVTAGQSCKRRTLPTTSRAPTLTALLPHXXXXXXXXXXXXPGGQFQ 618
DHHV LEGTLLKPNMVT G S + P T+TA L GGQ +
Sbjct: 214 DHHVLLEGTLLKPNMVTPG-SDSPKVAPEVIAEYTVTA-LRRTVPPAVPGIVFLSGGQSE 271
Query: 619 EEA 627
EEA
Sbjct: 272 EEA 274
Score = 116 bits (278), Expect = 2e-26
Identities = 56/86 (65%), Positives = 61/86 (70%)
Frame = +2
Query: 5 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 184
+SGVILF ETLYQK DG P V LL + G+IPGIKVDKGVV L G+ E TTQGLD L
Sbjct: 69 LSGVILFEETLYQKTTDGKPFVELLMENGVIPGIKVDKGVVDLAGTNGETTTQGLDSLGA 128
Query: 185 RCAQ**KDGCHFAKWRCVLKIGRTPP 262
RC + K G FAKWR VLKIG T P
Sbjct: 129 RCQEYYKAGARFAKWRAVLKIGATEP 154
>At5g03690.2 68418.m00329 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 359
Score = 119 bits (287), Expect = 2e-27
Identities = 65/123 (52%), Positives = 74/123 (60%)
Frame = +1
Query: 259 PSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALN 438
PS AI ENA LARYA ICQ +VPIVEPE+L DG HD+++ VTE VLAA YKAL+
Sbjct: 154 PSELAIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDIEKCAYVTERVLAACYKALS 213
Query: 439 DHHVYLEGTLLKPNMVTAGQSCKRRTLPTTSRAPTLTALLPHXXXXXXXXXXXXPGGQFQ 618
DHHV LEGTLLKPNMVT G + P T+ A L GGQ +
Sbjct: 214 DHHVILEGTLLKPNMVTPGSDSGSKVKPEVIAKHTVRA-LQRTVPAAVPAVVFLSGGQSE 272
Query: 619 EEA 627
EEA
Sbjct: 273 EEA 275
Score = 99 bits (238), Expect = 1e-21
Identities = 47/86 (54%), Positives = 57/86 (66%)
Frame = +2
Query: 5 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 184
ISG+ILF ETLYQK G V ++++ G++PGIKVDKG V L G+ E TT GLD L
Sbjct: 69 ISGIILFEETLYQKTASGKLFVDVMKEAGVLPGIKVDKGTVELAGTNGETTTTGLDGLGD 128
Query: 185 RCAQ**KDGCHFAKWRCVLKIGRTPP 262
RC + + G FAKWR VLKIG P
Sbjct: 129 RCKKYYEAGARFAKWRAVLKIGNNEP 154
>At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 393
Score = 119 bits (287), Expect = 2e-27
Identities = 65/123 (52%), Positives = 74/123 (60%)
Frame = +1
Query: 259 PSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALN 438
PS AI ENA LARYA ICQ +VPIVEPE+L DG HD+++ VTE VLAA YKAL+
Sbjct: 188 PSELAIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDIEKCAYVTERVLAACYKALS 247
Query: 439 DHHVYLEGTLLKPNMVTAGQSCKRRTLPTTSRAPTLTALLPHXXXXXXXXXXXXPGGQFQ 618
DHHV LEGTLLKPNMVT G + P T+ A L GGQ +
Sbjct: 248 DHHVILEGTLLKPNMVTPGSDSGSKVKPEVIAKHTVRA-LQRTVPAAVPAVVFLSGGQSE 306
Query: 619 EEA 627
EEA
Sbjct: 307 EEA 309
Score = 99 bits (238), Expect = 1e-21
Identities = 47/86 (54%), Positives = 57/86 (66%)
Frame = +2
Query: 5 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 184
ISG+ILF ETLYQK G V ++++ G++PGIKVDKG V L G+ E TT GLD L
Sbjct: 103 ISGIILFEETLYQKTASGKLFVDVMKEAGVLPGIKVDKGTVELAGTNGETTTTGLDGLGD 162
Query: 185 RCAQ**KDGCHFAKWRCVLKIGRTPP 262
RC + + G FAKWR VLKIG P
Sbjct: 163 RCKKYYEAGARFAKWRAVLKIGNNEP 188
>At2g36460.1 68415.m04475 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 358
Score = 116 bits (280), Expect = 1e-26
Identities = 66/123 (53%), Positives = 74/123 (60%)
Frame = +1
Query: 259 PSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALN 438
PS AI ENA LARYA ICQ +VPIVEPE+L DG HD+ + VTE VLAA YKAL+
Sbjct: 154 PSQLAIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDIQKCAAVTERVLAACYKALS 213
Query: 439 DHHVYLEGTLLKPNMVTAGQSCKRRTLPTTSRAPTLTALLPHXXXXXXXXXXXXPGGQFQ 618
DHHV LEGTLLKPNMVT G S + P T+ A L GGQ +
Sbjct: 214 DHHVLLEGTLLKPNMVTPG-SESAKVAPEVIAEHTVRA-LQRTVPAAVPAIVFLSGGQSE 271
Query: 619 EEA 627
EEA
Sbjct: 272 EEA 274
Score = 111 bits (267), Expect = 5e-25
Identities = 52/86 (60%), Positives = 61/86 (70%)
Frame = +2
Query: 5 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 184
+SGVILF ETLYQK+ DGTP V +L+ G++PGIKVDKG V L G+ E TTQGLD L
Sbjct: 69 LSGVILFEETLYQKSSDGTPFVDMLKSAGVLPGIKVDKGTVELAGTNGETTTQGLDGLGD 128
Query: 185 RCAQ**KDGCHFAKWRCVLKIGRTPP 262
RC + + G FAKWR VLKIG P
Sbjct: 129 RCKKYYEAGARFAKWRAVLKIGVNEP 154
>At4g26520.1 68417.m03820 fructose-bisphosphate aldolase,
cytoplasmic identical to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 116 bits (278), Expect = 2e-26
Identities = 61/99 (61%), Positives = 69/99 (69%)
Frame = +1
Query: 259 PSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALN 438
PS +IQE+A VLARYA ICQ +VPIVEPEVL G HD+ + VTE VLAAV+KALN
Sbjct: 154 PSVLSIQEDARVLARYAIICQENGLVPIVEPEVLTGGSHDIKKCAAVTETVLAAVFKALN 213
Query: 439 DHHVYLEGTLLKPNMVTAGQSCKRRTLPTTSRAPTLTAL 555
HHV LEGTLLKPNMVT G S + P T+TAL
Sbjct: 214 YHHVLLEGTLLKPNMVTPG-SDSPKVAPELIAEYTVTAL 251
Score = 111 bits (266), Expect = 6e-25
Identities = 53/86 (61%), Positives = 59/86 (68%)
Frame = +2
Query: 5 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 184
+SGVILF ETLYQK DG P V LL + G+IPGIKVDKG+V L G+ E TTQGLD L
Sbjct: 69 LSGVILFEETLYQKTSDGKPFVDLLMENGVIPGIKVDKGLVDLAGTNGETTTQGLDSLGA 128
Query: 185 RCAQ**KDGCHFAKWRCVLKIGRTPP 262
RC Q + G FAKWR KIG T P
Sbjct: 129 RCQQYYEAGARFAKWRAFFKIGATEP 154
>At3g52930.1 68416.m05834 fructose-bisphosphate aldolase, putative
similar to SP|O65735|ALF_CICAR Fructose-bisphosphate
aldolase, cytoplasmic isozyme {Cicer arietinum},
cytosolic aldolase [Fragaria x ananassa] GI:10645188;
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 358
Score = 115 bits (277), Expect = 3e-26
Identities = 65/123 (52%), Positives = 74/123 (60%)
Frame = +1
Query: 259 PSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALN 438
PS +I ENA LARYA ICQ +VPIVEPE+L DG HD+ + VTE VLAA YKAL+
Sbjct: 154 PSEHSIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDIQKCAAVTERVLAACYKALS 213
Query: 439 DHHVYLEGTLLKPNMVTAGQSCKRRTLPTTSRAPTLTALLPHXXXXXXXXXXXXPGGQFQ 618
DHHV LEGTLLKPNMVT G S + P T+ A L GGQ +
Sbjct: 214 DHHVLLEGTLLKPNMVTPG-SDSPKVSPEVIAEHTVRA-LQRTVPAAVPAIVFLSGGQSE 271
Query: 619 EEA 627
EEA
Sbjct: 272 EEA 274
Score = 107 bits (256), Expect = 1e-23
Identities = 50/86 (58%), Positives = 61/86 (70%)
Frame = +2
Query: 5 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 184
+SGVILF ETLYQK+ DG V +L++ G++PGIKVDKG V L G++ E TTQGLD L
Sbjct: 69 LSGVILFEETLYQKSSDGKLFVDILKEGGVLPGIKVDKGTVELAGTDGETTTQGLDGLGD 128
Query: 185 RCAQ**KDGCHFAKWRCVLKIGRTPP 262
RC + + G FAKWR VLKIG P
Sbjct: 129 RCKKYYEAGARFAKWRAVLKIGENEP 154
>At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 398
Score = 96.7 bits (230), Expect = 1e-20
Identities = 58/126 (46%), Positives = 71/126 (56%)
Frame = +1
Query: 250 PHTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYK 429
P+ PS A++E A LARYA+I Q +VPIVEPE+L DGEHD+DR V E V A V+
Sbjct: 193 PNGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEILLDGEHDIDRTYDVAEKVWAEVFF 252
Query: 430 ALNDHHVYLEGTLLKPNMVTAGQSCKRRTLPTTSRAPTLTALLPHXXXXXXXXXXXXPGG 609
L ++V EG LLKP+MVT G K R P A TL LL + GG
Sbjct: 253 YLAQNNVMFEGILLKPSMVTPGAESKDRATPEQVAAYTL-KLLRNRVPPAVPGIMFLSGG 311
Query: 610 QFQEEA 627
Q + EA
Sbjct: 312 QSEVEA 317
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = +2
Query: 5 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 184
+SG ILF ETLYQ +G +V +L ++ I+PGIKVDKG+VPL GS +E QGLD L+
Sbjct: 112 VSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWCQGLDGLSS 171
Query: 185 RCAQ**KDGCHFAKWRCVLKIGRTP 259
R A + G FAKWR V+ I P
Sbjct: 172 RTAAYYQQGARFAKWRTVVSIPNGP 196
>At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 399
Score = 96.7 bits (230), Expect = 1e-20
Identities = 48/85 (56%), Positives = 56/85 (65%)
Frame = +2
Query: 5 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 184
ISG ILF ETLYQ DG +V +L ++ I+PGIKVDKG+VPL GS DE QGLD LA
Sbjct: 113 ISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLAS 172
Query: 185 RCAQ**KDGCHFAKWRCVLKIGRTP 259
R A + G FAKWR V+ I P
Sbjct: 173 RTAAYYQQGARFAKWRTVVSIPNGP 197
Score = 89.4 bits (212), Expect = 2e-18
Identities = 54/126 (42%), Positives = 69/126 (54%)
Frame = +1
Query: 250 PHTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYK 429
P+ PS A++E A LARYA+I Q +VPIVEPE++ DGEH +DR V E V A V+
Sbjct: 194 PNGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEIMLDGEHGIDRTYDVAEKVWAEVFF 253
Query: 430 ALNDHHVYLEGTLLKPNMVTAGQSCKRRTLPTTSRAPTLTALLPHXXXXXXXXXXXXPGG 609
L ++V EG LLKP+MVT G R P + TL LL + GG
Sbjct: 254 YLAQNNVMFEGILLKPSMVTPGAEATDRATPEQVASYTL-KLLRNRIPPAVPGIMFLSGG 312
Query: 610 QFQEEA 627
Q + EA
Sbjct: 313 QSELEA 318
>At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 381
Score = 95.1 bits (226), Expect = 4e-20
Identities = 52/102 (50%), Positives = 63/102 (61%)
Frame = +1
Query: 250 PHTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYK 429
P+ PS A++E A LARYA+I Q +VPIVEPE+L DGEHD+DR V E V A V+
Sbjct: 193 PNGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEILLDGEHDIDRTYDVAEKVWAEVFF 252
Query: 430 ALNDHHVYLEGTLLKPNMVTAGQSCKRRTLPTTSRAPTLTAL 555
L ++V EG LLKP+MVT G K R P A TL L
Sbjct: 253 YLAQNNVMFEGILLKPSMVTPGAESKDRATPEQVAAYTLKLL 294
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = +2
Query: 5 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 184
+SG ILF ETLYQ +G +V +L ++ I+PGIKVDKG+VPL GS +E QGLD L+
Sbjct: 112 VSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWCQGLDGLSS 171
Query: 185 RCAQ**KDGCHFAKWRCVLKIGRTP 259
R A + G FAKWR V+ I P
Sbjct: 172 RTAAYYQQGARFAKWRTVVSIPNGP 196
>At2g01140.1 68415.m00023 fructose-bisphosphate aldolase, putative
similar to plastidic aldolase NPALDP1 from Nicotiana
paniculata [GI:4827251]; contains Pfam profile PF00274
Fructose-bisphosphate aldolase class-I
Length = 391
Score = 91.1 bits (216), Expect = 7e-19
Identities = 45/81 (55%), Positives = 51/81 (62%)
Frame = +2
Query: 5 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 184
ISG ILF ETLYQ DG V L I+PGIKVDKG+ PL GS +E QGLD LA
Sbjct: 105 ISGSILFEETLYQSTKDGKTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLDGLAS 164
Query: 185 RCAQ**KDGCHFAKWRCVLKI 247
R A+ K G FAKWR V+ +
Sbjct: 165 RSAEYYKQGARFAKWRTVVSV 185
Score = 88.6 bits (210), Expect = 4e-18
Identities = 53/126 (42%), Positives = 70/126 (55%)
Frame = +1
Query: 250 PHTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYK 429
P PS A++E A LARYA+I Q +VPIVEPE+L DG+H ++R +V E V + V+
Sbjct: 186 PCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFF 245
Query: 430 ALNDHHVYLEGTLLKPNMVTAGQSCKRRTLPTTSRAPTLTALLPHXXXXXXXXXXXXPGG 609
L ++V EG LLKP+MVT G K + P T TLT +L GG
Sbjct: 246 YLAQNNVMFEGILLKPSMVTPGAEHKNKASPETVADFTLT-MLKRRVPPAVPGIMFLSGG 304
Query: 610 QFQEEA 627
Q + EA
Sbjct: 305 QSEAEA 310
>At5g07540.2 68418.m00864 glycine-rich protein (GRP16) oleosin;
glycine-rich protein 16 (GRP16) PMID:11431566
Length = 190
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = -2
Query: 454 GTRGGRSAPCTRRPERPQSPSGRGPGRARHQVRLRARQSARCVGSDRWKRSGREHWRFPG 275
G G + + ++P SG GPG A R++ R VG W+ GR WR G
Sbjct: 128 GPSGDKPGGASGGGDKPGGASGGGPGGASGGAV--GRRTWRSVGRRTWRSVGRRTWRSVG 185
>At1g72080.1 68414.m08332 hypothetical protein
Length = 243
Score = 31.5 bits (68), Expect = 0.58
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 454 GTRGGRSAPCTRRPERPQSPSGRGPGRARHQVRLRARQSARCVG 323
G RGG + +R + QSPS G GR R + R R+R + G
Sbjct: 36 GRRGGNNRNRSRGRDDNQSPSNGGRGRGRGRSRRRSRSPSHSNG 79
>At5g58190.2 68418.m07284 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 528
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 423 VQGAERPPRVPRGDTPQAQHGDGRSVVQETYTPNDV 530
V ERP G Q H DGR++V +Y+ + V
Sbjct: 16 VSSGERPVMADNGVQQQVSHDDGRNIVSSSYSSSVV 51
>At2g44980.2 68415.m05601 transcription regulatory protein SNF2,
putative similar to SNF2P [Oryza sativa (japonica
cultivar-group)] GI:23193483; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain; CG donor site annotated
in one isoform based on protein alignments.
Length = 870
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 289 NVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALND--HHVYL 456
N++ + C + P +EPE +GEH + + K+ +VL + K L+D H V L
Sbjct: 343 NIVIQLRKACSHPYLFPGIEPEPFEEGEHLVQASGKL--LVLDQLLKRLHDSGHRVLL 398
>At2g44980.1 68415.m05600 transcription regulatory protein SNF2,
putative similar to SNF2P [Oryza sativa (japonica
cultivar-group)] GI:23193483; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain; CG donor site annotated
in one isoform based on protein alignments.
Length = 851
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 289 NVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALND--HHVYL 456
N++ + C + P +EPE +GEH + + K+ +VL + K L+D H V L
Sbjct: 334 NIVIQLRKACSHPYLFPGIEPEPFEEGEHLVQASGKL--LVLDQLLKRLHDSGHRVLL 389
>At4g03620.1 68417.m00497 myosin heavy chain-related contains weak
similarity to Swiss-Prot:P24733 myosin heavy chain,
striated muscle [Aequipecten irradians]
Length = 342
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 230 RCVLKIGRTPPRTKLSRKTPMFSPATLPSVRANASCRLSSPKSYLM 367
RC + R+P TK K P P + +R S +++ KS M
Sbjct: 133 RCYTDLKRSPDLTKSPTKPPQNDPEDIQKLRKELSASMAARKSLQM 178
>At3g24715.1 68416.m03103 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile
PF00564: PB1 domain
Length = 756
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -2
Query: 463 SPRGTRGGRSAPCTRRPERPQSPSGRGPG 377
S RG G SAPC PER QS + G G
Sbjct: 139 SNRGDVTGMSAPCVFLPERTQSNNFTGGG 167
>At1g56080.1 68414.m06439 expressed protein
Length = 310
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 284 TPMFSPATLPSVRANASCRLSSPKSYLMAST 376
TP FSPA PS +SP+SY AS+
Sbjct: 169 TPQFSPAFTPSGTPKILSTAASPRSYSAASS 199
>At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Frame = +1
Query: 91 HHPRHQGRQGC----RPAVRIGRRMHHPGSGRPRP 183
HH + GC RP R+ R HHP R RP
Sbjct: 44 HHNQRHDSDGCDPLRRPTPRLRRFFHHPIQERSRP 78
>At3g30300.1 68416.m03826 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as
'auxin-independent growth promoter -related' based on
similarity to axi 1 protein (GB:X80301) (GI:559920) from
[Nicotiana tabacum], which, due to scienitific fraud was
retracted. Retraction in: Schell J. EMBO J 1999 May
17;18(10):2908. PMID:10400497.
Length = 677
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +3
Query: 471 QAQHGDGRSVVQ---ETYTPNDVARANVNRPSSAPCPPQFPELTFLSGW 608
+A+H D + + E T +D ++ RP P PP P+ + GW
Sbjct: 399 EAKHNDIKKMTPPSIEVETKHDSLKSTRQRPQPLPPPPARPKYYNIEGW 447
>At2g43970.2 68415.m05468 La domain-containing protein contains Pfam
profile PF05383: La domain
Length = 529
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1
Query: 79 GEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRP 183
G HH H + G +P+ M PG G+ +P
Sbjct: 470 GRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQP 504
>At2g43970.1 68415.m05467 La domain-containing protein contains Pfam
profile PF05383: La domain
Length = 545
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1
Query: 79 GEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRP 183
G HH H + G +P+ M PG G+ +P
Sbjct: 486 GRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQP 520
>At4g02430.2 68417.m00330 pre-mRNA splicing factor, putative / SR1
protein, putative strong similarity to SP|O22315
Pre-mRNA splicing factor SF2 (SR1 protein) {Arabidopsis
thaliana}; cDNA NCBI_gi:15810292 supports a truncated
version while protein evidence supports a longer model.
Length = 278
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 260 PRTKLSRKTPMFSPATLPSVRANASCRLSSPKSYLMASTTWTA 388
P+ K R++P S + P R+ + R SP+ ++ W A
Sbjct: 234 PKAKSLRRSPAKSTSRSPRSRSRSKSRSLSPRGWVTVERHWIA 276
>At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein low similarity to
glucoamylase S1/S2 [Precursor] from Saccharomyces
cerevisiae [SP|P08640], proteophosphoglycan from
Leishmania major [GI:5420387]; contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 256
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 177 SPSAAPSNRRTAATSPSGVAC*RSAAHPLVPSYPGKRQCSRPLRFHLSEPTHRA 338
SP+ +PS+ ++ A +PS A S P+ S P S P+ H S PT R+
Sbjct: 138 SPTTSPSSAKSPAITPSSPAVSHSPP-PVRHSSPPVSHSSPPVS-HSSPPTSRS 189
>At5g58190.1 68418.m07283 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 527
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 423 VQGAERPPRVPRGDTPQAQHGDGRSVVQETYTPNDV 530
V ERP G Q H DGR++V +Y+ + V
Sbjct: 16 VSSGERPVMADNG-VQQVSHDDGRNIVSSSYSSSVV 50
>At5g09570.1 68418.m01108 expressed protein contains Pfam domain,
PF04933: Protein of unknown function (DUF657)
Length = 139
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 460 PRGTRGGRSAPCTRRPERPQSPSGRGPGRA 371
PRG+ GGRS+ RP +SP + RA
Sbjct: 2 PRGSSGGRSSYRPSRPAAARSPPPQSVNRA 31
>At4g19510.2 68417.m02870 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1049
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 351 GLDNRHDALALTDGSVAGENIGVFLDSLVRGG 256
G D RHD + + G+ I VF D+ +RGG
Sbjct: 25 GADTRHDFTSHLVKYLRGKGIDVFSDAKLRGG 56
>At4g19510.1 68417.m02869 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1049
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 351 GLDNRHDALALTDGSVAGENIGVFLDSLVRGG 256
G D RHD + + G+ I VF D+ +RGG
Sbjct: 25 GADTRHDFTSHLVKYLRGKGIDVFSDAKLRGG 56
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 97 PRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRPVIEGRLPLR 222
P + GCRP +RI R + SG + + + + PLR
Sbjct: 192 PNFDSQHGCRPIIRIFGRNYSSKSGLSTEMVYSMSDKKKPLR 233
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,299,753
Number of Sequences: 28952
Number of extensions: 400447
Number of successful extensions: 1503
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1496
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -