Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30248
(817 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14645-1|AAA28987.1| 450|Drosophila melanogaster protein ( D.me... 40 0.005
M14644-1|AAA28986.1| 449|Drosophila melanogaster protein ( D.me... 40 0.005
M14643-1|AAA28985.1| 450|Drosophila melanogaster protein ( D.me... 40 0.005
BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p pro... 40 0.005
BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p pro... 40 0.005
BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p pro... 40 0.005
AY113631-1|AAM29636.1| 449|Drosophila melanogaster RH71862p pro... 40 0.005
AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p pro... 40 0.005
AE014297-1015|AAF54433.1| 449|Drosophila melanogaster CG9476-PA... 40 0.005
AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,... 40 0.005
AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,... 40 0.005
AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA ... 40 0.005
AY089421-1|AAL90159.1| 379|Drosophila melanogaster AT24487p pro... 30 3.3
M14646-1|AAA28988.1| 462|Drosophila melanogaster protein ( D.me... 29 5.8
BT011034-1|AAR30194.1| 240|Drosophila melanogaster RE44641p pro... 29 5.8
AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA... 29 5.8
AY089253-1|AAL89991.1| 455|Drosophila melanogaster AT04270p pro... 29 7.6
AE014297-2432|AAF55488.1| 455|Drosophila melanogaster CG7794-PA... 29 7.6
AE014296-1690|AAF50242.1| 379|Drosophila melanogaster CG3222-PA... 29 7.6
>M14645-1|AAA28987.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-3), complete
cds. ).
Length = 450
Score = 39.5 bits (88), Expect = 0.005
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 718 RECISVHVGQAGVQIGN 768
RECIS+HVGQAGVQIGN
Sbjct: 2 RECISIHVGQAGVQIGN 18
>M14644-1|AAA28986.1| 449|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-2), complete
cds. ).
Length = 449
Score = 39.5 bits (88), Expect = 0.005
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 718 RECISVHVGQAGVQIGN 768
RECISVH+GQAGVQIGN
Sbjct: 2 RECISVHIGQAGVQIGN 18
>M14643-1|AAA28985.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-1), complete
cds. ).
Length = 450
Score = 39.5 bits (88), Expect = 0.005
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 718 RECISVHVGQAGVQIGN 768
RECIS+HVGQAGVQIGN
Sbjct: 2 RECISIHVGQAGVQIGN 18
>BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p
protein.
Length = 450
Score = 39.5 bits (88), Expect = 0.005
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 718 RECISVHVGQAGVQIGN 768
RECIS+HVGQAGVQIGN
Sbjct: 2 RECISIHVGQAGVQIGN 18
>BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p
protein.
Length = 450
Score = 39.5 bits (88), Expect = 0.005
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 718 RECISVHVGQAGVQIGN 768
RECIS+HVGQAGVQIGN
Sbjct: 2 RECISIHVGQAGVQIGN 18
>BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p
protein.
Length = 450
Score = 39.5 bits (88), Expect = 0.005
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 718 RECISVHVGQAGVQIGN 768
RECIS+HVGQAGVQIGN
Sbjct: 2 RECISIHVGQAGVQIGN 18
>AY113631-1|AAM29636.1| 449|Drosophila melanogaster RH71862p
protein.
Length = 449
Score = 39.5 bits (88), Expect = 0.005
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 718 RECISVHVGQAGVQIGN 768
RECISVH+GQAGVQIGN
Sbjct: 2 RECISVHIGQAGVQIGN 18
>AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p
protein.
Length = 450
Score = 39.5 bits (88), Expect = 0.005
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 718 RECISVHVGQAGVQIGN 768
RECIS+HVGQAGVQIGN
Sbjct: 2 RECISIHVGQAGVQIGN 18
>AE014297-1015|AAF54433.1| 449|Drosophila melanogaster CG9476-PA
protein.
Length = 449
Score = 39.5 bits (88), Expect = 0.005
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 718 RECISVHVGQAGVQIGN 768
RECISVH+GQAGVQIGN
Sbjct: 2 RECISVHIGQAGVQIGN 18
>AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,
isoform B protein.
Length = 450
Score = 39.5 bits (88), Expect = 0.005
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 718 RECISVHVGQAGVQIGN 768
RECIS+HVGQAGVQIGN
Sbjct: 2 RECISIHVGQAGVQIGN 18
>AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,
isoform A protein.
Length = 450
Score = 39.5 bits (88), Expect = 0.005
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 718 RECISVHVGQAGVQIGN 768
RECIS+HVGQAGVQIGN
Sbjct: 2 RECISIHVGQAGVQIGN 18
>AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA
protein.
Length = 450
Score = 39.5 bits (88), Expect = 0.005
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 718 RECISVHVGQAGVQIGN 768
RECIS+HVGQAGVQIGN
Sbjct: 2 RECISIHVGQAGVQIGN 18
>AY089421-1|AAL90159.1| 379|Drosophila melanogaster AT24487p
protein.
Length = 379
Score = 30.3 bits (65), Expect = 3.3
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = -3
Query: 809 GMPVLQAVKLPSRPLPIWTPAWPT--CTEMHSRCVIK-EKDQI 690
G P +P RP+P+ PAW T C ++ + K EKDQ+
Sbjct: 244 GQPNEPLENIPRRPMPVDDPAWETEMCVRAYAGMLDKQEKDQM 286
>M14646-1|AAA28988.1| 462|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-4), complete
cds. ).
Length = 462
Score = 29.5 bits (63), Expect = 5.8
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 718 RECISVHVGQAGVQIGN 768
RE +S+ +GQ G+QIGN
Sbjct: 2 REVVSIQIGQCGIQIGN 18
>BT011034-1|AAR30194.1| 240|Drosophila melanogaster RE44641p
protein.
Length = 240
Score = 29.5 bits (63), Expect = 5.8
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 718 RECISVHVGQAGVQIGN 768
RE +S+ +GQ G+QIGN
Sbjct: 2 REVVSIQIGQCGIQIGN 18
>AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA
protein.
Length = 462
Score = 29.5 bits (63), Expect = 5.8
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 718 RECISVHVGQAGVQIGN 768
RE +S+ +GQ G+QIGN
Sbjct: 2 REVVSIQIGQCGIQIGN 18
>AY089253-1|AAL89991.1| 455|Drosophila melanogaster AT04270p
protein.
Length = 455
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 721 ECISVHVGQAGVQIGN 768
E I +H+GQAGVQI N
Sbjct: 6 EIIQIHIGQAGVQIAN 21
>AE014297-2432|AAF55488.1| 455|Drosophila melanogaster CG7794-PA
protein.
Length = 455
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 721 ECISVHVGQAGVQIGN 768
E I +H+GQAGVQI N
Sbjct: 6 EIIQIHIGQAGVQIAN 21
>AE014296-1690|AAF50242.1| 379|Drosophila melanogaster CG3222-PA
protein.
Length = 379
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = -3
Query: 809 GMPVLQAVKLPSRPLPIWTPAWPT--CTEMHSRCVIK-EKDQI 690
G P +P RP+P+ PAW T C ++ + K +KDQ+
Sbjct: 244 GQPNEPLENIPRRPMPVDDPAWETEMCVRAYAGMLDKQQKDQM 286
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,987,061
Number of Sequences: 53049
Number of extensions: 663411
Number of successful extensions: 1143
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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