Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30246
         (783 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q72P22 Cluster: Transcriptional repressor; n=1; Leptosp...    34   3.5  
UniRef50_Q23K28 Cluster: Putative uncharacterized protein; n=1; ...    34   3.5  
UniRef50_UPI0000D56E2C Cluster: PREDICTED: similar to CG4370-PA,...    34   4.6  
UniRef50_P33003 Cluster: Protein I7; n=49; Poxviridae|Rep: Prote...    34   4.6  
UniRef50_Q0HKC7 Cluster: Insulysin; n=18; Shewanella|Rep: Insuly...    33   6.1  
UniRef50_Q4XVN7 Cluster: Putative uncharacterized protein; n=2; ...    33   6.1  
UniRef50_A5TY60 Cluster: Putative uncharacterized protein; n=2; ...    33   8.1  

>UniRef50_Q72P22 Cluster: Transcriptional repressor; n=1; Leptospira
           interrogans serovar Copenhageni|Rep: Transcriptional
           repressor - Leptospira interrogans serogroup
           Icterohaemorrhagiae serovarcopenhageni
          Length = 209

 Score = 34.3 bits (75), Expect = 3.5
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -3

Query: 685 NPQKKNLIRNPQSNLIIKLNKYGTRECGP 599
           NP+   ++ +P+ + I+ LN+YG  +CGP
Sbjct: 66  NPKDYEIVSDPEESNIVYLNRYGEAQCGP 94


>UniRef50_Q23K28 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 456

 Score = 34.3 bits (75), Expect = 3.5
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
 Frame = -1

Query: 360 FKEVLKYKSNELIVFVFFEPLLNKKRCVV---SWYT-G*DEVPYYKKNNLKFY 214
           F+ ++  +S E  +   F+PLLNK RCV     +Y    D++PY   NN K Y
Sbjct: 152 FQNIINIRSEEAEMKKTFKPLLNKNRCVCITQGYYEWTPDKIPYVFYNNQKDY 204


>UniRef50_UPI0000D56E2C Cluster: PREDICTED: similar to CG4370-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG4370-PA, isoform A - Tribolium castaneum
          Length = 427

 Score = 33.9 bits (74), Expect = 4.6
 Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -3

Query: 544 LLVDVHGRVKSNNVRCDSTEPNWTPCEI-LSNISTCALWSL 425
           L++  HG ++  ++  +  E NWTPC + + N ++C L+S+
Sbjct: 102 LIMFTHGDLEDEHLPQNQAESNWTPCVLNIHNFTSCYLFSI 142


>UniRef50_P33003 Cluster: Protein I7; n=49; Poxviridae|Rep: Protein
           I7 - Variola virus
          Length = 423

 Score = 33.9 bits (74), Expect = 4.6
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = -1

Query: 300 LLNKKRCVVSWYTG*DEVP--YYKKNNLKFYSRYKENKTGGFATTHGHSV 157
           + +KK+C+VS+Y     +P  ++  NN  FYS      + GF T H HSV
Sbjct: 246 IYDKKQCLVSFYDSGGNIPTEFHHYNNFYFYS-----FSDGFNTNHRHSV 290


>UniRef50_Q0HKC7 Cluster: Insulysin; n=18; Shewanella|Rep: Insulysin
           - Shewanella sp. (strain MR-4)
          Length = 929

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = -1

Query: 423 VQAMCSVEYFKYGRVVEDFRAFKEVLKYKSNELIVFVFFEPLLNKKRCVVSW-YTG*DEV 247
           +QA+ + +YF   R +   + + +V  +  NEL+  +   PL  +KR  +S+ + G D  
Sbjct: 216 LQALAA-QYFSAVRNLNLVKQYPDVPLFSENELLKQINIVPLKEQKRLSISFNFPGIDH- 273

Query: 246 PYYKKNNLKFYSRYKENKTGG 184
            YYK+  L + S    N++ G
Sbjct: 274 -YYKRKPLTYISHILGNESKG 293


>UniRef50_Q4XVN7 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 515

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = +1

Query: 304 FKEHKHNEFIRFIFQNLFKSAEIFHYSTILKIF 402
           FK+ K  E I+FIF N+FK+ ++FH  T L I+
Sbjct: 449 FKKLKKEE-IKFIFLNIFKNLKLFHQDTSLWIY 480


>UniRef50_A5TY60 Cluster: Putative uncharacterized protein; n=2;
           Fusobacterium nucleatum|Rep: Putative uncharacterized
           protein - Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953
          Length = 85

 Score = 33.1 bits (72), Expect = 8.1
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +1

Query: 274 HHTSFFI*KWFKEHKHNEFIRFIFQNLFKSAEIFHYSTILKIFNRTHR 417
           H  SF     FK+H ++  I+FI++N++    +  +   L IF  T+R
Sbjct: 2   HTKSFMFFSSFKKHTNSSLIKFIYKNIYTVLFLNFFYKTLAIFKITYR 49


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 775,783,159
Number of Sequences: 1657284
Number of extensions: 15233276
Number of successful extensions: 35222
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35216
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66262109095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)