Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30246
         (783 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    26   1.1  
EF519375-1|ABP68484.1|  493|Anopheles gambiae LRIM1 protein.           25   3.5  
X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.       24   4.6  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   4.6  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    24   6.1  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    23   8.1  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    23   8.1  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 328 FIRFIFQNLFKSAEIFHYSTILKIFNRTHRLDVR 429
           F R  F+ LF +A +  Y T L++FN  H L  R
Sbjct: 854 FTRVAFRRLFGAASLPPYETRLQLFN-LHSLSFR 886


>EF519375-1|ABP68484.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -1

Query: 540 LSTFMGELNRITSDA--TRPNLTGHHAKY*AIFQLAHYGPY 424
           L  F  +  R+ + A  T   LTG + +   +  L HYGPY
Sbjct: 276 LRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPMLGHYGPY 316


>X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.
          Length = 123

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +1

Query: 322 NEFIRFIFQNLFKSAEIFHYSTILKIFNRTHRLDVRTIM 438
           N F+  IF+ + + + + HY+    I +R  +  VR ++
Sbjct: 62  NSFVNDIFERIARKSRLAHYNKRSTITSREIQTAVRLLL 100


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 204  KENKTGGFATTHGHSVTCELIVVHFI 127
            K  + G     HGHS+T  L+VV  I
Sbjct: 976  KLGQLGSGGARHGHSLTSSLLVVVLI 1001


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 639 IRFDCGFLIRFFFWGFYDLLTK 704
           +RF C   +R F+W  +DL  K
Sbjct: 270 LRFGC-LSVRMFYWCVHDLFAK 290


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 438 HYGPYVQAMCSVEYFKYGRVVED 370
           HY P     C+VE   YG  V D
Sbjct: 147 HYYPLDSQNCTVEIESYGYTVSD 169


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 256 LSSVPRHHTSFFI*KWFKEHKHNEFIRFI 342
           ++++PR H    + ++  E K  EF+RFI
Sbjct: 380 ITALPRTHILKELAEYCGEEKDKEFLRFI 408


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 838,534
Number of Sequences: 2352
Number of extensions: 16230
Number of successful extensions: 56
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)