Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30245
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    26   0.36 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.62 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.83 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   7.7  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 257 TPTKTKLNLFLTSGRSLTPRTIPFGM 334
           +P   +   FL +GRS T + +PFG+
Sbjct: 406 SPESRQYTAFLYNGRSYTYQVLPFGL 431


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 635 LSVPFHEEVVLDKFLGLLARRIQFLPVV 552
           L+ P  EEV+LD+ L     RIQ L V+
Sbjct: 256 LTTPLSEEVLLDELLRHFPERIQSLWVL 283


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -2

Query: 381 TAHEHLSEFLRVF--VFGIPNGIVLGVKLLPEVRNRFSFVFV 262
           T H HLS+ +R+F  +FG    ++ G+  L   +  F+   V
Sbjct: 856 TLHHHLSKLIRLFNEIFGHGLLLMFGISFLLVTQTIFALCVV 897


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = -1

Query: 640 RLCRFRSTKK*SWTSFLV 587
           R+C F+S+KK +++ FL+
Sbjct: 152 RMCFFKSSKKPAFSHFLI 169


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = -1

Query: 640 RLCRFRSTKK*SWTSFLV 587
           R+C F+S+KK +++ FL+
Sbjct: 152 RMCFFKSSKKPAFSHFLI 169


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = -1

Query: 640 RLCRFRSTKK*SWTSFLV 587
           R+C F+S+KK +++ FL+
Sbjct: 152 RMCFFKSSKKPAFSHFLI 169


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = -1

Query: 640 RLCRFRSTKK*SWTSFLV 587
           R+C F+S+KK +++ FL+
Sbjct: 152 RMCFFKSSKKPAFSHFLI 169


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -2

Query: 528 QTTAGTRLLSAPHPHSGDGGIVVFTKQADGC 436
           Q   G     AP P     G++  TK+ D C
Sbjct: 8   QPPFGVLRFKAPQPPENWTGVLDATKEGDPC 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,708
Number of Sequences: 336
Number of extensions: 3663
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)