Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30243
(655 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 166 5e-40
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 153 4e-36
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 148 1e-34
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 134 1e-30
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 131 2e-29
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 129 5e-29
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 107 2e-22
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 97 2e-19
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 95 1e-18
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 86 8e-16
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 82 1e-14
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 79 9e-14
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 77 4e-13
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 74 3e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 73 8e-12
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 72 1e-11
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 71 2e-11
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 71 2e-11
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 71 2e-11
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 69 7e-11
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 69 1e-10
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 68 2e-10
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 67 3e-10
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 67 4e-10
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 66 7e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 9e-10
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 64 2e-09
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 62 1e-08
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 61 2e-08
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 61 3e-08
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 1e-07
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 58 1e-07
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 57 3e-07
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 57 4e-07
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 57 4e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 4e-07
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 53 7e-06
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 53 7e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 7e-06
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 2e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 2e-05
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 51 3e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 4e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 9e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 1e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 1e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 2e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 3e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 3e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 8e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 0.001
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.001
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.001
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.002
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 44 0.004
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.004
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.006
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 43 0.007
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.007
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.023
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.023
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 38 0.21
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.28
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.28
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.28
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.37
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.37
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.49
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 0.85
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 0.85
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 1.1
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 35 1.5
UniRef50_A7JM26 Cluster: Predicted protein; n=1; Francisella tul... 35 2.0
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.0
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.0
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 2.6
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.0
UniRef50_Q983B9 Cluster: Msl8734 protein; n=1; Mesorhizobium lot... 33 7.9
UniRef50_Q86AL0 Cluster: Similar to Dictyostelium discoideum (Sl... 33 7.9
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 7.9
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 166 bits (403), Expect = 5e-40
Identities = 83/106 (78%), Positives = 88/106 (83%), Gaps = 1/106 (0%)
Frame = +3
Query: 210 KNRQTREHLLVFFTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 389
K + E L KE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 390 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK-SESHT 524
NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNK + HT
Sbjct: 134 NGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHT 179
Score = 75.4 bits (177), Expect = 1e-12
Identities = 33/52 (63%), Positives = 42/52 (80%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
G +IGKPHTVPCKVTG+CGS+ +RLIPAP GI+S+P+PKK MAG+ +
Sbjct: 171 GNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGT-GIVSAPVPKKLLMMAGIDD 221
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 264
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 153 bits (371), Expect = 4e-36
Identities = 78/106 (73%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +3
Query: 210 KNRQTREHLLVFFTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 389
K + E L KE EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 390 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK-SESHT 524
NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWGNK + HT
Sbjct: 74 NGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHT 119
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILS 610
G +IGKPHTVPCKVTG+C S+ + LIPAP V+ L+
Sbjct: 111 GNKIGKPHTVPCKVTGRCSSVLVHLIPAPEQVMAALN 147
Score = 46.0 bits (104), Expect = 8e-04
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +1
Query: 172 VPVTKLGRLVREGKIDKLESIYLFSLPIKNS 264
+PVTKLG L+ + KI LE IYLFSLPIK S
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKES 31
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 148 bits (359), Expect = 1e-34
Identities = 68/106 (64%), Positives = 86/106 (81%), Gaps = 1/106 (0%)
Frame = +3
Query: 210 KNRQTREHLLVFFTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 389
K + E L KE++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 390 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK-SESHT 524
+GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG + HT
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHT 152
Score = 63.7 bits (148), Expect = 4e-09
Identities = 26/52 (50%), Positives = 41/52 (78%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
G +G PHTVP KV+GKCGS+T+RL+PAP G++++P+ K+ Q+AG+++
Sbjct: 144 GTALGDPHTVPVKVSGKCGSVTVRLVPAPRGA-GLVAAPVTKRFLQLAGIED 194
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/36 (69%), Positives = 32/36 (88%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIK
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIK 63
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 134 bits (325), Expect = 1e-30
Identities = 64/101 (63%), Positives = 80/101 (79%), Gaps = 2/101 (1%)
Frame = +3
Query: 228 EHLLVF-FTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 404
EH+ +F KE +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 405 LGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK-SESHT 524
LGVK KEVA +I+G++ILAKL+++PVRRGYWG+K E HT
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
G ++G+PHT+P KV GKCGS+ +RLIPAP GI++S KK MAGL +
Sbjct: 161 GSKLGEPHTIPTKVHGKCGSVHVRLIPAPRGA-GIVASGTVKKVLAMAGLHD 211
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = +1
Query: 154 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
+D+ WVP TKLGRLV++GKI LE I+LFSLPIK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIK 79
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 131 bits (316), Expect = 2e-29
Identities = 62/91 (68%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
Frame = +3
Query: 255 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 434
KEF+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA
Sbjct: 64 KEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVA 122
Query: 435 TAIRGAIILAKLSVLPVRRGYWG-NKSESHT 524
AIR II+AKLSV+P+RRGYWG N + H+
Sbjct: 123 GAIRAGIIIAKLSVIPIRRGYWGTNLGQPHS 153
Score = 59.7 bits (138), Expect = 6e-08
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
G +G+PH++ K TGKCGS+T+RLIPAP GI++SP KK Q+AG+++
Sbjct: 145 GTNLGQPHSLATKTTGKCGSVTVRLIPAP-RGSGIVASPAVKKLLQLAGVED 195
Score = 52.4 bits (120), Expect = 9e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +1
Query: 157 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
++K WVPVTKLGRLV+ GKI +E I+L SLP+K
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVK 64
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 129 bits (312), Expect = 5e-29
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +3
Query: 300 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 479
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 480 PVRRGYWGNK 509
P+R+GYWGNK
Sbjct: 108 PLRQGYWGNK 117
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
G +IGKP+TVPCKVTG CGS+ + LIPAP G++S+P+PKK MAG+ +
Sbjct: 115 GNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGT-GMVSAPVPKKLLMMAGIDD 165
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 107 bits (258), Expect = 2e-22
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Frame = +3
Query: 255 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 434
+E EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A
Sbjct: 50 REPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAA 109
Query: 435 TAIRGAIILAKLSVLPVRRGYW-GNKSESHTPS 530
+AIRGAI AK ++ PVR G W G + + HT S
Sbjct: 110 SAIRGAIARAKCAIRPVRLGLWDGAQGKPHTVS 142
Score = 56.8 bits (131), Expect = 4e-07
Identities = 24/48 (50%), Positives = 36/48 (75%)
Frame = +2
Query: 512 GKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
GKPHTV CK +GKCG+ +++IPAP GI+S + KK F++AG+++
Sbjct: 136 GKPHTVSCKGSGKCGTSVVQVIPAPRGT-GIISGSVNKKIFELAGIKD 182
Score = 37.9 bits (84), Expect = 0.21
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
++++ EW+P T +GRLV+ KI LE I+ FS I+
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIR 50
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 97.5 bits (232), Expect = 2e-19
Identities = 49/66 (74%), Positives = 51/66 (77%)
Frame = +3
Query: 210 KNRQTREHLLVFFTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 389
K + E L KE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 108
Query: 390 NGHIGL 407
NGH+GL
Sbjct: 109 NGHVGL 114
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 264
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 95.5 bits (227), Expect = 1e-18
Identities = 44/59 (74%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
Frame = +3
Query: 351 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK-SESHT 524
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+ + HT
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHT 119
Score = 66.1 bits (154), Expect = 7e-10
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
G +I KPHTVP KVTG+CGS+ +RLIPAP G +S+P+PKK MAG+ +
Sbjct: 111 GNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGT-GFVSAPVPKKLLMMAGIDD 161
Score = 33.5 bits (73), Expect = 4.5
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 157 DQKEWVPVTKLGRLVREGKI 216
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 85.8 bits (203), Expect = 8e-16
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +3
Query: 210 KNRQTREHLLVFFTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 389
K + E L KE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 390 NGHIG 404
NG+ G
Sbjct: 62 NGYAG 66
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 82.2 bits (194), Expect = 1e-14
Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = -3
Query: 530 GRCVAFR-FVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETC 354
G V F VTPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ LE
Sbjct: 21 GHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEAR 80
Query: 353 ALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFFIGK 246
L+GT L L HDL + ++Q A+EEI+DLE F G+
Sbjct: 81 TLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQ 116
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 79.0 bits (186), Expect = 9e-14
Identities = 49/91 (53%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = +3
Query: 255 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 434
KE EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+ G+ EVA
Sbjct: 77 KETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVITGL---DEVA 127
Query: 435 TAIRGAIILAKLSVLPVRRGYWGNK-SESHT 524
I+ IIL KL ++PV RGY G+K S+ HT
Sbjct: 128 NTIQRVIILTKLPIVPVWRGYCGSKTSKPHT 158
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
G + KPHTV CKVTG GS+++ LIPAP + I S+P+PKK MAG+ +
Sbjct: 150 GSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTV-ISSAPMPKKLLMMAGIND 199
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 175 PVTKLGRLVREGKIDKLESIYLFSLPIKNS 264
P +KLG LV++ +I L IYLFSLPIK +
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKET 79
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 77.0 bits (181), Expect = 4e-13
Identities = 38/64 (59%), Positives = 50/64 (78%)
Frame = +3
Query: 255 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 434
KE++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV
Sbjct: 93 KEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQ 151
Query: 435 TAIR 446
AI+
Sbjct: 152 GAIQ 155
Score = 52.8 bits (121), Expect = 7e-06
Identities = 22/33 (66%), Positives = 29/33 (87%)
Frame = +1
Query: 160 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIK
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIK 93
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/80 (43%), Positives = 55/80 (68%)
Frame = +3
Query: 255 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 434
+E EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++GL + KEVA
Sbjct: 21 REVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVA 79
Query: 435 TAIRGAIILAKLSVLPVRRG 494
+ IR AI AKL+++PV RG
Sbjct: 80 STIRKAIDKAKLNMIPVMRG 99
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 512 GKPHT-VPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
G P T VP K+TG+ GS + L+PAP G++ S ++ +AG+ +
Sbjct: 107 GGPGTSVPLKITGRSGSTRVTLMPAP-AGKGLVVSDYGRRVLTLAGVTD 154
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 72.5 bits (170), Expect = 8e-12
Identities = 37/79 (46%), Positives = 55/79 (69%)
Frame = +3
Query: 258 EFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVAT 437
E EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV
Sbjct: 46 EPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGP 104
Query: 438 AIRGAIILAKLSVLPVRRG 494
AIR AI AKLS++ VR G
Sbjct: 105 AIRKAIAHAKLSLIKVRVG 123
Score = 41.9 bits (94), Expect = 0.013
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 512 GKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
G PH++P G CGS+ + L+PAP V G+++ + K +AG+++
Sbjct: 132 GSPHSIPFTAKGACGSVKVELLPAPRGV-GLVAGNVAKAVLGLAGVKD 178
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/82 (46%), Positives = 58/82 (70%)
Frame = -3
Query: 503 TPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLY 324
TPVTSS+W N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L
Sbjct: 112 TPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLD 171
Query: 323 RHDL*NLIIQGRAEEEINDLEF 258
R D+ N I+Q ++ +NDLEF
Sbjct: 172 RLDVHNFILQ-VWQQLVNDLEF 192
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/74 (48%), Positives = 49/74 (66%)
Frame = +3
Query: 255 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 434
KEFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V I D N ++ LGV+ KE+
Sbjct: 150 KEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELL 209
Query: 435 TAIRGAIILAKLSV 476
A+ +L+ + V
Sbjct: 210 IAVCRTNVLSIILV 223
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 71.3 bits (167), Expect = 2e-11
Identities = 37/52 (71%), Positives = 38/52 (73%)
Frame = +3
Query: 210 KNRQTREHLLVFFTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 365
K + E L KE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 264
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +2
Query: 536 KVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
KVTG+CGS+ +RLIPAP GI+S+P+PKK MAG+ +
Sbjct: 125 KVTGRCGSVLVRLIPAPRGT-GIVSAPVPKKLLMMAGIDD 163
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 70.9 bits (166), Expect = 2e-11
Identities = 32/87 (36%), Positives = 56/87 (64%)
Frame = +3
Query: 240 VFFTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 419
+FF N + +++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK
Sbjct: 92 IFFHNNK--LVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 420 SKEVATAIRGAIILAKLSVLPVRRGYW 500
S + I+ A+ AKL++ +RRGYW
Sbjct: 150 SMDSKAGIKAALRKAKLAITKIRRGYW 176
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +2
Query: 512 GKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
GKP+T+ K +GK GS+ + + PAP GI++S +++G+++
Sbjct: 181 GKPNTIKYKTSGKAGSVVVCIKPAP-KGTGIVASKFQLNVLKISGIRD 227
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 69.3 bits (162), Expect = 7e-11
Identities = 31/80 (38%), Positives = 53/80 (66%)
Frame = +3
Query: 255 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 434
KE++I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE A
Sbjct: 34 KEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAA 92
Query: 435 TAIRGAIILAKLSVLPVRRG 494
AI+ AI AKL+++ ++RG
Sbjct: 93 PAIKKAIDNAKLNIIEIKRG 112
Score = 42.7 bits (96), Expect = 0.007
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +2
Query: 512 GKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
GKPHT+P V GK GS+++ L PAP V G+ + K +MAG+ +
Sbjct: 121 GKPHTLPFLVNGKSGSVSVTLKPAPQGV-GLAVGDVVKVILRMAGIDD 167
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 163 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
+EW P T+LGRLV G+I + LP+K
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLK 34
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 68.5 bits (160), Expect = 1e-10
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = +3
Query: 255 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 434
KEFEI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V
Sbjct: 21 KEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVG 78
Query: 435 TAIRGAIILAKL-SVLPVRRGYWGNKSESHTPSLARSPASV 554
TA+ + + L S LP R Y GN T R+ S+
Sbjct: 79 TAVGLSSWSSFLSSCLP--RDYCGNNIRKPTYPCKRTGWSI 117
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/79 (44%), Positives = 54/79 (68%)
Frame = +3
Query: 258 EFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVAT 437
E EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++
Sbjct: 43 EPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRV 101
Query: 438 AIRGAIILAKLSVLPVRRG 494
AI+ AI AK++++PVRRG
Sbjct: 102 AIQKAIRDAKMNIIPVRRG 120
Score = 39.9 bits (89), Expect = 0.052
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +2
Query: 512 GKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
G+PH++P KV GK GS+ + L+PAP G++ + K AG+++
Sbjct: 129 GEPHSLPFKVVGKAGSVEVDLLPAP-KGTGLVVGSVLKTLLTYAGIKD 175
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 163 KEWVPVTKLGRLVREGKIDKLESIYLFSLPI 255
+EW P T +G LV+EGKI ++ ++ +LPI
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPI 41
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 67.3 bits (157), Expect = 3e-10
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Frame = +3
Query: 255 KEFEIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 422
KE EIID L P +N EVL I + T +G+R RF+ A+G+ +G++GLG+
Sbjct: 45 KEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHG 103
Query: 423 KEVATAIRGAIILAKLSVLPVRRG 494
KEV AIR AI AKL+++ ++RG
Sbjct: 104 KEVGIAIRKAINYAKLNIIEIKRG 127
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +2
Query: 515 KPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
+PH+VP V GK GS+ +RLIP P LG++ + KK ++AG+Q+
Sbjct: 137 RPHSVPFAVEGKEGSVRVRLIPGP-RGLGLVIGDVGKKILRLAGVQD 182
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 166 EWVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
EW P TKLG +V+EG+I + I+ IK
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIK 45
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 66.9 bits (156), Expect = 4e-10
Identities = 35/80 (43%), Positives = 52/80 (65%)
Frame = +3
Query: 255 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 434
KE EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V
Sbjct: 87 KEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVG 145
Query: 435 TAIRGAIILAKLSVLPVRRG 494
AI+ AI +AKL+++ V RG
Sbjct: 146 GAIQKAIDVAKLNIIEVDRG 165
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 66.1 bits (154), Expect = 7e-10
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +3
Query: 273 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 452
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 453 IILAKLSVLPVRRGYWGNK-SESHTPS 530
IIL + S+ G+ GNK ++ HT S
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVS 81
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/52 (44%), Positives = 32/52 (61%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
G +I KPHTV C+VT S+ + I AP ILS+P+PKK +MA + +
Sbjct: 71 GNKIAKPHTVSCRVTRLYCSVLVHHISAPRGT-DILSAPVPKKLLRMASIDD 121
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 9e-10
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +3
Query: 327 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 470
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/80 (42%), Positives = 51/80 (63%)
Frame = +3
Query: 255 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 434
KE E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V
Sbjct: 36 KESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVG 94
Query: 435 TAIRGAIILAKLSVLPVRRG 494
AI+ AI +AKL+++ V RG
Sbjct: 95 GAIQKAIDIAKLNIIDVSRG 114
Score = 40.7 bits (91), Expect = 0.030
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 512 GKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
G+PHTV + GK GS+ + L PAP LG+ +K ++AG+++
Sbjct: 123 GRPHTVALRTEGKAGSVEVELQPAP-RGLGLAGGETVRKVLELAGIED 169
Score = 33.1 bits (72), Expect = 6.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 169 WVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 264
W P T+LG+ V EG+ID ++ LP+K S
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKES 38
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +3
Query: 288 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 467
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++ AI A A
Sbjct: 85 PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAY 144
Query: 468 LSVLPVRRG 494
L+V P++ G
Sbjct: 145 LNVNPIKMG 153
Score = 41.9 bits (94), Expect = 0.013
Identities = 21/45 (46%), Positives = 32/45 (71%)
Frame = +2
Query: 521 HTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
H+VP KV GK GS+TI +IPAP LG+++ K+ ++AGL++
Sbjct: 165 HSVPFKVKGKGGSVTIEIIPAP-RGLGLVAGGKIKRLLELAGLKD 208
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 61.3 bits (142), Expect = 2e-08
Identities = 33/52 (63%), Positives = 35/52 (67%)
Frame = +3
Query: 210 KNRQTREHLLVFFTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 365
K + E L K EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 56.8 bits (131), Expect = 4e-07
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 264
K + KEW+P TKLG LV++ KI LE IYLFSLPIK S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
Score = 43.2 bits (97), Expect = 0.006
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +2
Query: 536 KVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMA 643
KVTG+CGS+ +RL AP GI+S+P+PKK MA
Sbjct: 125 KVTGRCGSVLVRLFSAPRGT-GIVSAPVPKKLLMMA 159
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/69 (47%), Positives = 43/69 (62%)
Frame = +3
Query: 255 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 434
KEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+
Sbjct: 16 KEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELL 75
Query: 435 TAIRGAIIL 461
A+ IIL
Sbjct: 76 IAVCRTIIL 84
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +3
Query: 288 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 467
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++ AI A A
Sbjct: 66 PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQAL 125
Query: 468 LSVLPVRRG 494
L+V P++ G
Sbjct: 126 LNVGPIKLG 134
Score = 37.9 bits (84), Expect = 0.21
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = +2
Query: 521 HTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
H+VP KV GK GS+ I ++PAP LG+++ ++ ++AGL++
Sbjct: 146 HSVPFKVRGKGGSVVIEILPAP-RGLGLVAGGKIRRLLELAGLKD 189
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 57.2 bits (132), Expect = 3e-07
Identities = 33/67 (49%), Positives = 42/67 (62%)
Frame = +3
Query: 321 PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 500
P+ KQT Q+TRFKA V +G + GH+ LG+K S EVA IILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATG 147
Query: 501 GNKSESH 521
G + E H
Sbjct: 148 GKRLEPH 154
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +2
Query: 515 KPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
+PH VPC+VTG+CGSL + LIPAP G +S+P+P K MAG+ +
Sbjct: 152 EPHMVPCRVTGRCGSLLVHLIPAPRGT-GTVSAPVP-KLLMMAGIDD 196
Score = 49.6 bits (113), Expect = 6e-05
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1
Query: 160 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNSRSLISSSARP 294
+ +W+P+TKLG LV+E KI LE IY FSL +N RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 56.8 bits (131), Expect = 4e-07
Identities = 35/64 (54%), Positives = 40/64 (62%)
Frame = +3
Query: 252 NKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 431
NK+ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+
Sbjct: 87 NKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKT 142
Query: 432 ATAI 443
ATAI
Sbjct: 143 ATAI 146
Score = 40.7 bits (91), Expect = 0.030
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +2
Query: 524 TVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
TV CKVTG+C S+ I LIP I+S+P+PKK +A + +
Sbjct: 162 TVSCKVTGQCVSVLICLIPP---TRNIISAPVPKKLLLLANIDD 202
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 56.8 bits (131), Expect = 4e-07
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +2
Query: 482 SSKRLLG*QIGKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
S ++ LG +IGK H V CKVTG CGS+ + LIPA GI S+P+P K MAG+ +
Sbjct: 1 SVEKPLGNKIGKTHIVLCKVTGCCGSVLVHLIPA-HRGTGISSAPVPTKPLMMAGIDD 57
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.8 bits (131), Expect = 4e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +3
Query: 285 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 464
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 465 KLSVL--PVRRGY 497
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 52.8 bits (121), Expect = 7e-06
Identities = 38/88 (43%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +3
Query: 264 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 443
+II+FFLG L DEVL+ M Q QRTR K F + + L V CSKEV TA
Sbjct: 51 DIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAA 104
Query: 444 RGAIILAKLSVLPVRRGYWGNK-SESHT 524
+ AI L + + GY GNK HT
Sbjct: 105 QRAITLLSF-LFSTQTGYKGNKIGNPHT 131
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 476 FTSSKRLLG*QIGKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGL 649
F++ G +IG PHT+PC VT +L + + G +S+ +PKK +A +
Sbjct: 115 FSTQTGYKGNKIGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 52.8 bits (121), Expect = 7e-06
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +3
Query: 255 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 407
KE++I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 63 KEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 38.3 bits (85), Expect = 0.16
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +1
Query: 175 PVTKLGRLVREGKIDKLESIYLFSLPIK 258
PVTKLGRLV++GK+ ++ I+ F + IK
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIK 63
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 7e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +3
Query: 294 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 473
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 474 VLPV 485
++ V
Sbjct: 72 LISV 75
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +3
Query: 291 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 470
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 471 SVLPVRR 491
+++ V++
Sbjct: 108 NLIKVKQ 114
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +3
Query: 273 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 452
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 453 IILAKLSVLPV 485
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +3
Query: 327 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 494
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V RG
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARG 127
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +2
Query: 512 GKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
G PH++P +V GK GS+ + L PAP V GI++ KK F++AG+++
Sbjct: 136 GAPHSIPYQVEGKSGSVRVILKPAPKGV-GIVADDEIKKIFRLAGIKD 182
Score = 37.1 bits (82), Expect = 0.37
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 163 KEWVPVTKLGRLVREGKIDKLESI 234
+EW P TKLGRLV+EGKI ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +3
Query: 288 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 467
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 468 LSVLPV 485
++ +
Sbjct: 73 KQLVRI 78
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 9e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +3
Query: 294 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 473
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 474 VLPVR 488
+ V+
Sbjct: 138 MYKVK 142
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +3
Query: 300 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 479
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 480 PV 485
+
Sbjct: 71 KI 72
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +3
Query: 300 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 479
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 480 PV 485
V
Sbjct: 77 EV 78
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +3
Query: 279 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 458
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 459 LAKLSVLPV 485
AK +++ V
Sbjct: 98 EAKKNLIRV 106
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +3
Query: 300 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 479
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 480 --PVRRG 494
PV G
Sbjct: 79 TVPVENG 85
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +3
Query: 300 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 479
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 480 PV 485
V
Sbjct: 209 QV 210
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 8e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 300 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 452
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +3
Query: 300 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 479
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 480 PV 485
V
Sbjct: 246 TV 247
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 285 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 464
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 465 KLSVL--PVRRG 494
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +3
Query: 285 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 464
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 465 KLSVLPVRR 491
K + V R
Sbjct: 102 KKHMFSVPR 110
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +3
Query: 300 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 473
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 474 VLPVRRG 494
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +3
Query: 297 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 476
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 477 LPV 485
+ +
Sbjct: 91 VKI 93
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +3
Query: 300 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 479
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 480 PV 485
V
Sbjct: 128 RV 129
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +3
Query: 294 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 473
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 474 VLPV 485
V+ V
Sbjct: 88 VIRV 91
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 42.7 bits (96), Expect = 0.007
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +1
Query: 169 WVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
W PVTKLGRLV++GK+ ++ I+ F + IK
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIK 64
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.007
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 300 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 479
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 480 PV 485
V
Sbjct: 104 RV 105
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.023
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +3
Query: 300 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 479
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 480 PV 485
V
Sbjct: 79 EV 80
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.023
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 294 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 467
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 37.9 bits (84), Expect = 0.21
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +3
Query: 159 PERVGSCHQTRPSCSRRKNRQTREHLLVFFTNKEFEIIDFFLGPS--LNDEVLKIMPVQK 332
P+ G+ + T S KN + ++ TN + + P ++++ I V
Sbjct: 42 PDHKGTINTTPNDNSTSKNSKDKDFKFKKKTNSQNFKKNANKKPEKEFEEKIVNIARVTN 101
Query: 333 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 485
+ G+R F A V +GD G +G G + EV AI+ A+ A+ +++ V
Sbjct: 102 VVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLIRV 152
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.28
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 324 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 491
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.28
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 294 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 446
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.28
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 294 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 473
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 474 VLPVRR 491
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.37
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 455 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 357
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.37
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 294 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 446
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.49
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +3
Query: 294 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 473
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 474 VLPV 485
++ V
Sbjct: 81 MVRV 84
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 35.9 bits (79), Expect = 0.85
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 297 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 446
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 0.85
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 306 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 485
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 1.1
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +3
Query: 324 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 491
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 1.5
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +3
Query: 291 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 470
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 471 SVLPVRR 491
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 35.1 bits (77), Expect = 1.5
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -3
Query: 251 GKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 156
GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 22 GKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_A7JM26 Cluster: Predicted protein; n=1; Francisella
tularensis subsp. novicida GA99-3548|Rep: Predicted
protein - Francisella tularensis subsp. novicida
GA99-3548
Length = 377
Score = 34.7 bits (76), Expect = 2.0
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 181 TKLGRLVREGKIDKLESIYLFSLPIKNSRSLISSSA 288
TK+GRL I+ ++ +YLF PI N+R+L SSA
Sbjct: 125 TKIGRLQSFQNINSMQGVYLFEAPI-NTRALFQSSA 159
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +3
Query: 282 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 461
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 462 AKLSVL 479
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.0
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 279 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 443
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 2.6
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +3
Query: 291 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 470
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 471 SVLPVRR 491
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 306 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 452
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q983B9 Cluster: Msl8734 protein; n=1; Mesorhizobium
loti|Rep: Msl8734 protein - Rhizobium loti
(Mesorhizobium loti)
Length = 62
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 520 THRPLQGHRQVWFFNNPADSCPLRGTGNFVFA 615
THRP+ G W +PA S PL GN A
Sbjct: 2 THRPVPGEHTAWTTASPASSVPLEYGGNVALA 33
>UniRef50_Q86AL0 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Homeobox-containing protein; n=2; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Homeobox-containing protein -
Dictyostelium discoideum (Slime mold)
Length = 766
Score = 32.7 bits (71), Expect = 7.9
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Frame = -3
Query: 536 CKGRCVAFRFVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTV-VVANGNK--- 369
C+ R +F + N N+++ SA+ +FL T T + ++++GNK
Sbjct: 650 CRFRGGILKFPKDKQTPNTYNKEIGSLFSANGSIKNFLMWSSTTTQVIEEILSSGNKTIT 709
Query: 368 CLETCALSGTCLF-LYRHDL*NLIIQ 294
C ET A+ TC F Y DL LI Q
Sbjct: 710 CFETSAIDNTCNFDKYLLDLNRLINQ 735
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 32.7 bits (71), Expect = 7.9
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = -1
Query: 178 QEPTLSGLPCRAHDHGRDHDRVHE-DRRGLYLHRV-----IRIRRENRHVHRLEQRPPL 20
+EPT S CR+ GR H R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,061,807
Number of Sequences: 1657284
Number of extensions: 14102862
Number of successful extensions: 39469
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 37264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39305
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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