Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30243
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   2.9  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   2.9  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   5.1  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   8.9  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.9  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   8.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.9  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 133 GRDHDRVHEDRRGLYLH 83
           G+D   VH  RRGL LH
Sbjct: 14  GQDKHMVHWFRRGLRLH 30


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 473 RQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNK 369
           ++  K NS +NGS D +      ++    + NG+K
Sbjct: 275 KEKDKPNSTTNGSPDVIKVEPELSDSEKTLCNGSK 309


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 494 TSSNW*NRQLSKDNSASNGSGD 429
           T+S+   R  +  NSASN SGD
Sbjct: 335 TASSKNYRSATGGNSASNSSGD 356


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +3

Query: 198 CSRRKNRQTREHLLVFFTNKEF 263
           C RR+ RQT          KEF
Sbjct: 4   CPRRRGRQTYTRFQTLELEKEF 25


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 563 TIRLIPAPFVVLGILSSPIPKK 628
           +++ I     +LG+LS   PKK
Sbjct: 14  SLKCITKVLTILGLLSCSFPKK 35


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 563 TIRLIPAPFVVLGILSSPIPKK 628
           +++ I     +LG+LS   PKK
Sbjct: 10  SLKCITKVLTILGLLSCSFPKK 31


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +3

Query: 198 CSRRKNRQTREHLLVFFTNKEF 263
           C RR+ RQT          KEF
Sbjct: 155 CPRRRGRQTYTRFQTLELEKEF 176


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +3

Query: 198 CSRRKNRQTREHLLVFFTNKEF 263
           C RR+ RQT          KEF
Sbjct: 214 CPRRRGRQTYTRFQTLELEKEF 235


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,034
Number of Sequences: 336
Number of extensions: 3295
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)