Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30243
(655 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 173 2e-43
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 173 2e-43
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 173 2e-43
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 173 2e-43
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 173 2e-43
BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 31 1.8
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 31 1.8
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 28 9.6
AY069043-1|AAL39188.1| 365|Drosophila melanogaster GH04191p pro... 28 9.6
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 28 9.6
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 173 bits (421), Expect = 2e-43
Identities = 87/106 (82%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Frame = +3
Query: 210 KNRQTREHLLVFFTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 389
K + E L KEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 390 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK-SESHT 524
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK + HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 76.6 bits (180), Expect = 3e-14
Identities = 33/52 (63%), Positives = 44/52 (84%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
G +IGKPHTVPCKVTGKCGS+++RLIPAP GI+S+P+P+K MAG+++
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGT-GIVSAPVPRKLLTMAGIED 204
Score = 68.5 bits (160), Expect = 7e-12
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 173 bits (421), Expect = 2e-43
Identities = 87/106 (82%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Frame = +3
Query: 210 KNRQTREHLLVFFTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 389
K + E L KEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 390 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK-SESHT 524
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK + HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 77.8 bits (183), Expect = 1e-14
Identities = 34/52 (65%), Positives = 44/52 (84%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
G +IGKPHTVPCKVTGKCGS+++RLIPAP GI+S+P+PKK MAG+++
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGT-GIVSAPVPKKLLTMAGIED 204
Score = 68.5 bits (160), Expect = 7e-12
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 173 bits (421), Expect = 2e-43
Identities = 87/106 (82%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Frame = +3
Query: 210 KNRQTREHLLVFFTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 389
K + E L KEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 390 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK-SESHT 524
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK + HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 77.8 bits (183), Expect = 1e-14
Identities = 34/52 (65%), Positives = 44/52 (84%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
G +IGKPHTVPCKVTGKCGS+++RLIPAP GI+S+P+PKK MAG+++
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGT-GIVSAPVPKKLLTMAGIED 204
Score = 68.5 bits (160), Expect = 7e-12
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 173 bits (421), Expect = 2e-43
Identities = 87/106 (82%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Frame = +3
Query: 210 KNRQTREHLLVFFTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 389
K + E L KEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 390 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK-SESHT 524
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK + HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 77.8 bits (183), Expect = 1e-14
Identities = 34/52 (65%), Positives = 44/52 (84%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
G +IGKPHTVPCKVTGKCGS+++RLIPAP GI+S+P+PKK MAG+++
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGT-GIVSAPVPKKLLTMAGIED 204
Score = 68.5 bits (160), Expect = 7e-12
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 173 bits (421), Expect = 2e-43
Identities = 87/106 (82%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Frame = +3
Query: 210 KNRQTREHLLVFFTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 389
K + E L KEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 390 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK-SESHT 524
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK + HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 77.8 bits (183), Expect = 1e-14
Identities = 34/52 (65%), Positives = 44/52 (84%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSLTIRLIPAPFVVLGILSSPIPKKAFQMAGLQE 655
G +IGKPHTVPCKVTGKCGS+++RLIPAP GI+S+P+PKK MAG+++
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGT-GIVSAPVPKKLLTMAGIED 204
Score = 68.5 bits (160), Expect = 7e-12
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
>BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p
protein.
Length = 823
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 157 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 14
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 157 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 14
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373
>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
protein.
Length = 1953
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 622 RNWRRQNSQYHEGGRNQPD 566
R WRR++++YH GG + PD
Sbjct: 806 RTWRRRSNKYHSGGED-PD 823
>AY069043-1|AAL39188.1| 365|Drosophila melanogaster GH04191p
protein.
Length = 365
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 622 RNWRRQNSQYHEGGRNQPD 566
R WRR++++YH GG + PD
Sbjct: 69 RTWRRRSNKYHSGGED-PD 86
>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
protein.
Length = 2528
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 622 RNWRRQNSQYHEGGRNQPD 566
R WRR++++YH GG + PD
Sbjct: 806 RTWRRRSNKYHSGGED-PD 823
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,571,257
Number of Sequences: 53049
Number of extensions: 687776
Number of successful extensions: 3444
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2942
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -