Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30242
(703 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC126343-1|AAI26344.1| 514|Homo sapiens t-SNARE domain containi... 59 2e-08
BC113556-1|AAI13557.1| 513|Homo sapiens t-SNARE domain containi... 59 2e-08
AK055726-1|BAB70997.1| 513|Homo sapiens protein ( Homo sapiens ... 59 2e-08
BC065226-1|AAH65226.1| 311|Homo sapiens TSNARE1 protein protein. 58 2e-08
U77942-1|AAC51851.1| 261|Homo sapiens syntaxin 7 protein. 46 2e-04
BC011975-1|AAH11975.1| 261|Homo sapiens syntaxin 7 protein. 46 2e-04
AL589691-2|CAI16817.1| 239|Homo sapiens syntaxin 7 protein. 46 2e-04
AL589691-1|CAI16816.1| 261|Homo sapiens syntaxin 7 protein. 46 2e-04
AL357034-3|CAI15717.1| 239|Homo sapiens syntaxin 7 protein. 46 2e-04
AL357034-2|CAI15716.1| 261|Homo sapiens syntaxin 7 protein. 46 2e-04
CR407620-1|CAG28548.1| 269|Homo sapiens STX12 protein. 44 5e-04
BC046999-1|AAH46999.1| 276|Homo sapiens syntaxin 12 protein. 44 5e-04
AL035306-1|CAA22911.1| 269|Homo sapiens hypothetical protein pr... 44 5e-04
AL020997-9|CAI20575.1| 276|Homo sapiens syntaxin 12 protein. 44 5e-04
AL020997-8|CAI20574.1| 234|Homo sapiens syntaxin 12 protein. 44 5e-04
AF123769-1|AAP97248.1| 276|Homo sapiens syntaxin protein. 44 5e-04
AY184206-1|AAO27774.1| 3212|Homo sapiens nesprin-1 beta 2 protein. 36 0.14
AY061755-1|AAL33798.1| 3321|Homo sapiens nesprin-1 beta protein. 36 0.14
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. 36 0.14
AL450401-4|CAI40730.1| 2963|Homo sapiens spectrin repeat contain... 35 0.24
AL450401-3|CAI40729.1| 3321|Homo sapiens spectrin repeat contain... 35 0.24
AL357081-1|CAI41322.1| 3321|Homo sapiens spectrin repeat contain... 35 0.24
AL138832-5|CAI42787.1| 2963|Homo sapiens spectrin repeat contain... 35 0.24
AL138832-4|CAI42786.1| 3321|Homo sapiens spectrin repeat contain... 35 0.24
AL078582-5|CAI42287.1| 2963|Homo sapiens spectrin repeat contain... 35 0.24
AL078582-3|CAI42284.1| 3321|Homo sapiens spectrin repeat contain... 35 0.24
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. 35 0.24
AB065845-1|BAC06063.1| 312|Homo sapiens seven transmembrane hel... 30 9.2
AB065657-1|BAC05883.1| 312|Homo sapiens seven transmembrane hel... 30 9.2
>BC126343-1|AAI26344.1| 514|Homo sapiens t-SNARE domain containing
1 protein.
Length = 514
Score = 58.8 bits (136), Expect = 2e-08
Identities = 27/88 (30%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Frame = +3
Query: 258 MKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVVVRRGDKPQKL-----QVER 422
++ +G P+D+ +LRD +H QQ N +++A+A ++++ ++R ++L Q++R
Sbjct: 282 LQSLGTPSDTQELRDSLHTAQQETNKTIAASASSVKQMAELLRSSCPQERLQQERPQLDR 341
Query: 423 LTQAFTDCLAKYSSVQKKVSEKMAAHMP 506
L +D + Y VQKK++EK A +P
Sbjct: 342 LKTQLSDAIQCYGVVQKKIAEKSRALLP 369
>BC113556-1|AAI13557.1| 513|Homo sapiens t-SNARE domain containing
1 protein.
Length = 513
Score = 58.8 bits (136), Expect = 2e-08
Identities = 27/88 (30%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Frame = +3
Query: 258 MKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVVVRRGDKPQKL-----QVER 422
++ +G P+D+ +LRD +H QQ N +++A+A ++++ ++R ++L Q++R
Sbjct: 282 LQSLGTPSDTQELRDSLHTAQQETNKTIAASASSVKQMAELLRSSCPQERLQQERPQLDR 341
Query: 423 LTQAFTDCLAKYSSVQKKVSEKMAAHMP 506
L +D + Y VQKK++EK A +P
Sbjct: 342 LKTQLSDAIQCYGVVQKKIAEKSRALLP 369
>AK055726-1|BAB70997.1| 513|Homo sapiens protein ( Homo sapiens
cDNA FLJ31164 fis, clone KIDNE1000104, weakly similar to
SYNTAXIN 7. ).
Length = 513
Score = 58.8 bits (136), Expect = 2e-08
Identities = 27/88 (30%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Frame = +3
Query: 258 MKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVVVRRGDKPQKL-----QVER 422
++ +G P+D+ +LRD +H QQ N +++A+A ++++ ++R ++L Q++R
Sbjct: 282 LQSLGTPSDTQELRDSLHTAQQETNKTIAASASSVKQMAELLRSSCPQERLQQERPQLDR 341
Query: 423 LTQAFTDCLAKYSSVQKKVSEKMAAHMP 506
L +D + Y VQKK++EK A +P
Sbjct: 342 LKTQLSDAIQCYGVVQKKIAEKSRALLP 369
>BC065226-1|AAH65226.1| 311|Homo sapiens TSNARE1 protein protein.
Length = 311
Score = 58.4 bits (135), Expect = 2e-08
Identities = 28/88 (31%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Frame = +3
Query: 258 MKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVVVRRGDKPQKL-----QVER 422
++ +G P+D+ +LRD +H QQ N +++A+A ++++ ++ R P++L Q++R
Sbjct: 97 LQSLGTPSDTQELRDSLHTAQQETNKTIAASASSVKQMAELL-RSSCPERLQQERPQLDR 155
Query: 423 LTQAFTDCLAKYSSVQKKVSEKMAAHMP 506
L +D + Y VQKK++EK A +P
Sbjct: 156 LKTQLSDAIQCYGVVQKKIAEKSRALLP 183
>U77942-1|AAC51851.1| 261|Homo sapiens syntaxin 7 protein.
Length = 261
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 258 MKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVV--VRRGDKPQKLQVERLTQ 431
+ Q+G P DS +LR ++ QQ N T + I+ G + + +K+Q +RL
Sbjct: 36 LNQLGTPQDSPELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVA 95
Query: 432 AFTDCLAKYSSVQKKVSEK 488
FT L + VQ++ +E+
Sbjct: 96 EFTTSLTNFQKVQRQAAER 114
>BC011975-1|AAH11975.1| 261|Homo sapiens syntaxin 7 protein.
Length = 261
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 258 MKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVV--VRRGDKPQKLQVERLTQ 431
+ Q+G P DS +LR ++ QQ N T + I+ G + + +K+Q +RL
Sbjct: 36 LNQLGTPQDSPELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVA 95
Query: 432 AFTDCLAKYSSVQKKVSEK 488
FT L + VQ++ +E+
Sbjct: 96 EFTTSLTNFQKVQRQAAER 114
>AL589691-2|CAI16817.1| 239|Homo sapiens syntaxin 7 protein.
Length = 239
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 258 MKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVV--VRRGDKPQKLQVERLTQ 431
+ Q+G P DS +LR ++ QQ N T + I+ G + + +K+Q +RL
Sbjct: 36 LNQLGTPQDSPELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVA 95
Query: 432 AFTDCLAKYSSVQKKVSEK 488
FT L + VQ++ +E+
Sbjct: 96 EFTTSLTNFQKVQRQAAER 114
>AL589691-1|CAI16816.1| 261|Homo sapiens syntaxin 7 protein.
Length = 261
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 258 MKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVV--VRRGDKPQKLQVERLTQ 431
+ Q+G P DS +LR ++ QQ N T + I+ G + + +K+Q +RL
Sbjct: 36 LNQLGTPQDSPELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVA 95
Query: 432 AFTDCLAKYSSVQKKVSEK 488
FT L + VQ++ +E+
Sbjct: 96 EFTTSLTNFQKVQRQAAER 114
>AL357034-3|CAI15717.1| 239|Homo sapiens syntaxin 7 protein.
Length = 239
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 258 MKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVV--VRRGDKPQKLQVERLTQ 431
+ Q+G P DS +LR ++ QQ N T + I+ G + + +K+Q +RL
Sbjct: 36 LNQLGTPQDSPELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVA 95
Query: 432 AFTDCLAKYSSVQKKVSEK 488
FT L + VQ++ +E+
Sbjct: 96 EFTTSLTNFQKVQRQAAER 114
>AL357034-2|CAI15716.1| 261|Homo sapiens syntaxin 7 protein.
Length = 261
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 258 MKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVV--VRRGDKPQKLQVERLTQ 431
+ Q+G P DS +LR ++ QQ N T + I+ G + + +K+Q +RL
Sbjct: 36 LNQLGTPQDSPELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVA 95
Query: 432 AFTDCLAKYSSVQKKVSEK 488
FT L + VQ++ +E+
Sbjct: 96 EFTTSLTNFQKVQRQAAER 114
>CR407620-1|CAG28548.1| 269|Homo sapiens STX12 protein.
Length = 269
Score = 44.0 bits (99), Expect = 5e-04
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 255 MMKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVVV----RRGDKPQKLQVER 422
+M Q+G DS +L++ + Q + N T ++ LG + + Q+LQ ER
Sbjct: 39 LMSQLGTKQDSSKLQENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKER 98
Query: 423 LTQAFTDCLAKYSSVQKKVSEK 488
L F+ L + +VQ++VSEK
Sbjct: 99 LMNDFSAALNNFQAVQRRVSEK 120
>BC046999-1|AAH46999.1| 276|Homo sapiens syntaxin 12 protein.
Length = 276
Score = 44.0 bits (99), Expect = 5e-04
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 255 MMKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVVV----RRGDKPQKLQVER 422
+M Q+G DS +L++ + Q + N T ++ LG + + Q+LQ ER
Sbjct: 46 LMSQLGTKQDSSKLQENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKER 105
Query: 423 LTQAFTDCLAKYSSVQKKVSEK 488
L F+ L + +VQ++VSEK
Sbjct: 106 LMNDFSAALNNFQAVQRRVSEK 127
>AL035306-1|CAA22911.1| 269|Homo sapiens hypothetical protein
protein.
Length = 269
Score = 44.0 bits (99), Expect = 5e-04
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 255 MMKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVVV----RRGDKPQKLQVER 422
+M Q+G DS +L++ + Q + N T ++ LG + + Q+LQ ER
Sbjct: 39 LMSQLGTKQDSSKLQENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKER 98
Query: 423 LTQAFTDCLAKYSSVQKKVSEK 488
L F+ L + +VQ++VSEK
Sbjct: 99 LMNDFSAALNNFQAVQRRVSEK 120
>AL020997-9|CAI20575.1| 276|Homo sapiens syntaxin 12 protein.
Length = 276
Score = 44.0 bits (99), Expect = 5e-04
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 255 MMKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVVV----RRGDKPQKLQVER 422
+M Q+G DS +L++ + Q + N T ++ LG + + Q+LQ ER
Sbjct: 46 LMSQLGTKQDSSKLQENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKER 105
Query: 423 LTQAFTDCLAKYSSVQKKVSEK 488
L F+ L + +VQ++VSEK
Sbjct: 106 LMNDFSAALNNFQAVQRRVSEK 127
>AL020997-8|CAI20574.1| 234|Homo sapiens syntaxin 12 protein.
Length = 234
Score = 44.0 bits (99), Expect = 5e-04
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 255 MMKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVVV----RRGDKPQKLQVER 422
+M Q+G DS +L++ + Q + N T ++ LG + + Q+LQ ER
Sbjct: 46 LMSQLGTKQDSSKLQENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKER 105
Query: 423 LTQAFTDCLAKYSSVQKKVSEK 488
L F+ L + +VQ++VSEK
Sbjct: 106 LMNDFSAALNNFQAVQRRVSEK 127
>AF123769-1|AAP97248.1| 276|Homo sapiens syntaxin protein.
Length = 276
Score = 44.0 bits (99), Expect = 5e-04
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 255 MMKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVVV----RRGDKPQKLQVER 422
+M Q+G DS +L++ + Q + N T ++ LG + + Q+LQ ER
Sbjct: 46 LMSQLGTKQDSSKLQENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKER 105
Query: 423 LTQAFTDCLAKYSSVQKKVSEK 488
L F+ L + +VQ++VSEK
Sbjct: 106 LMNDFSAALNNFQAVQRRVSEK 127
>AY184206-1|AAO27774.1| 3212|Homo sapiens nesprin-1 beta 2 protein.
Length = 3212
Score = 35.9 bits (79), Expect = 0.14
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +3
Query: 312 DTQQTVNSSVSATARDIQRLGVVVRRGDKPQKLQVERLTQAFTDCLAKYSSVQKKVSEKM 491
D Q ++ SSV +T + RL V + ++ R+ +TD L +VQ+K+ +
Sbjct: 1265 DAQSSLKSSVLSTGNQLLRLKKV---DTATLRSELSRIDSQWTDLLTNIPAVQEKLHQLQ 1321
Query: 492 AAHMPNRHA*ETIHNCWSS 548
+P+RHA + + W+S
Sbjct: 1322 MDKLPSRHAISEVMS-WTS 1339
>AY061755-1|AAL33798.1| 3321|Homo sapiens nesprin-1 beta protein.
Length = 3321
Score = 35.9 bits (79), Expect = 0.14
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +3
Query: 312 DTQQTVNSSVSATARDIQRLGVVVRRGDKPQKLQVERLTQAFTDCLAKYSSVQKKVSEKM 491
D Q ++ SSV +T + RL V + ++ R+ +TD L +VQ+K+ +
Sbjct: 1374 DAQSSLKSSVLSTGNQLLRLKKV---DTATLRSELSRIDSQWTDLLTNIPAVQEKLHQLQ 1430
Query: 492 AAHMPNRHA*ETIHNCWSS 548
+P+RHA + + W+S
Sbjct: 1431 MDKLPSRHAISEVMS-WTS 1448
>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
Length = 8797
Score = 35.9 bits (79), Expect = 0.14
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +3
Query: 312 DTQQTVNSSVSATARDIQRLGVVVRRGDKPQKLQVERLTQAFTDCLAKYSSVQKKVSEKM 491
D Q ++ SSV +T + RL V + ++ R+ +TD L +VQ+K+ +
Sbjct: 6850 DAQSSLKSSVLSTGNQLLRLKKV---DTATLRSELSRIDSQWTDLLTNIPAVQEKLHQLQ 6906
Query: 492 AAHMPNRHA*ETIHNCWSS 548
+P+RHA + + W+S
Sbjct: 6907 MDKLPSRHAISEVMS-WTS 6924
>AL450401-4|CAI40730.1| 2963|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 2963
Score = 35.1 bits (77), Expect = 0.24
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +3
Query: 312 DTQQTVNSSVSATARDIQRLGVVVRRGDKPQKLQVERLTQAFTDCLAKYSSVQKKVSEKM 491
D Q ++ SSV +T + RL V + ++ R+ +TD L +VQ+K+ +
Sbjct: 993 DAQSSLKSSVLSTGNQLLRLKKV---DTATLRSELSRIDSQWTDLLTNIPAVQEKLHQLQ 1049
Query: 492 AAHMPNRHA 518
+P+RHA
Sbjct: 1050 MDKLPSRHA 1058
>AL450401-3|CAI40729.1| 3321|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 3321
Score = 35.1 bits (77), Expect = 0.24
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +3
Query: 312 DTQQTVNSSVSATARDIQRLGVVVRRGDKPQKLQVERLTQAFTDCLAKYSSVQKKVSEKM 491
D Q ++ SSV +T + RL V + ++ R+ +TD L +VQ+K+ +
Sbjct: 1374 DAQSSLKSSVLSTGNQLLRLKKV---DTATLRSELSRIDSQWTDLLTNIPAVQEKLHQLQ 1430
Query: 492 AAHMPNRHA 518
+P+RHA
Sbjct: 1431 MDKLPSRHA 1439
>AL357081-1|CAI41322.1| 3321|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 3321
Score = 35.1 bits (77), Expect = 0.24
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +3
Query: 312 DTQQTVNSSVSATARDIQRLGVVVRRGDKPQKLQVERLTQAFTDCLAKYSSVQKKVSEKM 491
D Q ++ SSV +T + RL V + ++ R+ +TD L +VQ+K+ +
Sbjct: 1374 DAQSSLKSSVLSTGNQLLRLKKV---DTATLRSELSRIDSQWTDLLTNIPAVQEKLHQLQ 1430
Query: 492 AAHMPNRHA 518
+P+RHA
Sbjct: 1431 MDKLPSRHA 1439
>AL138832-5|CAI42787.1| 2963|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 2963
Score = 35.1 bits (77), Expect = 0.24
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +3
Query: 312 DTQQTVNSSVSATARDIQRLGVVVRRGDKPQKLQVERLTQAFTDCLAKYSSVQKKVSEKM 491
D Q ++ SSV +T + RL V + ++ R+ +TD L +VQ+K+ +
Sbjct: 993 DAQSSLKSSVLSTGNQLLRLKKV---DTATLRSELSRIDSQWTDLLTNIPAVQEKLHQLQ 1049
Query: 492 AAHMPNRHA 518
+P+RHA
Sbjct: 1050 MDKLPSRHA 1058
>AL138832-4|CAI42786.1| 3321|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 3321
Score = 35.1 bits (77), Expect = 0.24
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +3
Query: 312 DTQQTVNSSVSATARDIQRLGVVVRRGDKPQKLQVERLTQAFTDCLAKYSSVQKKVSEKM 491
D Q ++ SSV +T + RL V + ++ R+ +TD L +VQ+K+ +
Sbjct: 1374 DAQSSLKSSVLSTGNQLLRLKKV---DTATLRSELSRIDSQWTDLLTNIPAVQEKLHQLQ 1430
Query: 492 AAHMPNRHA 518
+P+RHA
Sbjct: 1431 MDKLPSRHA 1439
>AL078582-5|CAI42287.1| 2963|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 2963
Score = 35.1 bits (77), Expect = 0.24
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +3
Query: 312 DTQQTVNSSVSATARDIQRLGVVVRRGDKPQKLQVERLTQAFTDCLAKYSSVQKKVSEKM 491
D Q ++ SSV +T + RL V + ++ R+ +TD L +VQ+K+ +
Sbjct: 993 DAQSSLKSSVLSTGNQLLRLKKV---DTATLRSELSRIDSQWTDLLTNIPAVQEKLHQLQ 1049
Query: 492 AAHMPNRHA 518
+P+RHA
Sbjct: 1050 MDKLPSRHA 1058
>AL078582-3|CAI42284.1| 3321|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 3321
Score = 35.1 bits (77), Expect = 0.24
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +3
Query: 312 DTQQTVNSSVSATARDIQRLGVVVRRGDKPQKLQVERLTQAFTDCLAKYSSVQKKVSEKM 491
D Q ++ SSV +T + RL V + ++ R+ +TD L +VQ+K+ +
Sbjct: 1374 DAQSSLKSSVLSTGNQLLRLKKV---DTATLRSELSRIDSQWTDLLTNIPAVQEKLHQLQ 1430
Query: 492 AAHMPNRHA 518
+P+RHA
Sbjct: 1431 MDKLPSRHA 1439
>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
Length = 8749
Score = 35.1 bits (77), Expect = 0.24
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +3
Query: 312 DTQQTVNSSVSATARDIQRLGVVVRRGDKPQKLQVERLTQAFTDCLAKYSSVQKKVSEKM 491
D Q ++ SSV +T + RL V + ++ R+ +TD L +VQ+K+ +
Sbjct: 6779 DAQSSLKSSVLSTGNQLLRLKKV---DTATLRSELSRIDSQWTDLLTNIPAVQEKLHQLQ 6835
Query: 492 AAHMPNRHA 518
+P+RHA
Sbjct: 6836 MDKLPSRHA 6844
>AB065845-1|BAC06063.1| 312|Homo sapiens seven transmembrane helix
receptor protein.
Length = 312
Score = 29.9 bits (64), Expect = 9.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 317 SIVNFISKLDAIIWATNLLHHFSSDSSPLL 228
S VN +S + +N++HHF D+SP+L
Sbjct: 156 SFVNVVSMSRLHFYDSNVIHHFFCDTSPIL 185
>AB065657-1|BAC05883.1| 312|Homo sapiens seven transmembrane helix
receptor protein.
Length = 312
Score = 29.9 bits (64), Expect = 9.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 317 SIVNFISKLDAIIWATNLLHHFSSDSSPLL 228
S VN +S + +N++HHF D+SP+L
Sbjct: 156 SFVNVVSMSRLHFYDSNVIHHFFCDTSPIL 185
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,637,322
Number of Sequences: 237096
Number of extensions: 1957062
Number of successful extensions: 7804
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 7695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7804
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -