Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30242
         (703 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069551-1|AAL39696.1|  284|Drosophila melanogaster LD27581p pro...    74   2e-13
AE014296-2241|AAF49845.1|  284|Drosophila melanogaster CG11278-P...    74   2e-13
AY069516-1|AAL39661.1|  282|Drosophila melanogaster LD23667p pro...    42   8e-04
AE014296-3540|AAF51726.3|  282|Drosophila melanogaster CG5081-PB...    42   8e-04
AE014296-3539|AAF51725.1|  282|Drosophila melanogaster CG5081-PA...    42   8e-04

>AY069551-1|AAL39696.1|  284|Drosophila melanogaster LD27581p
           protein.
          Length = 284

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 33/80 (41%), Positives = 52/80 (65%)
 Frame = +3

Query: 252 EMMKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVVVRRGDKPQKLQVERLTQ 431
           + +K IG   +   LR+K+H      N+ V  T++D+QRL  VVR GD+ QKLQ+E+LT+
Sbjct: 70  KQLKLIGTSKEQPNLREKVHTINTKCNARVQTTSQDLQRLQAVVRHGDRQQKLQLEKLTR 129

Query: 432 AFTDCLAKYSSVQKKVSEKM 491
            F   + KYS++Q+++S  M
Sbjct: 130 EFHGVVEKYSNLQRRISSAM 149



 Score = 38.7 bits (86), Expect = 0.008
 Identities = 24/48 (50%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
 Frame = +1

Query: 112 GSGRDYGATA-SVPAVGFA------DFSPTELYNLSEGIAENVNTINS 234
           G  RDYGA A S P V FA       FSPTE  +LSE I  N+  I+S
Sbjct: 16  GPHRDYGAMADSTPEVSFAAAGGSSGFSPTEFMSLSEDIGHNITAIHS 63


>AE014296-2241|AAF49845.1|  284|Drosophila melanogaster CG11278-PA
           protein.
          Length = 284

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 33/80 (41%), Positives = 52/80 (65%)
 Frame = +3

Query: 252 EMMKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVVVRRGDKPQKLQVERLTQ 431
           + +K IG   +   LR+K+H      N+ V  T++D+QRL  VVR GD+ QKLQ+E+LT+
Sbjct: 70  KQLKLIGTSKEQPNLREKVHTINTKCNARVQTTSQDLQRLQAVVRHGDRQQKLQLEKLTR 129

Query: 432 AFTDCLAKYSSVQKKVSEKM 491
            F   + KYS++Q+++S  M
Sbjct: 130 EFHGVVEKYSNLQRRISSAM 149



 Score = 38.7 bits (86), Expect = 0.008
 Identities = 24/48 (50%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
 Frame = +1

Query: 112 GSGRDYGATA-SVPAVGFA------DFSPTELYNLSEGIAENVNTINS 234
           G  RDYGA A S P V FA       FSPTE  +LSE I  N+  I+S
Sbjct: 16  GPHRDYGAMADSTPEVSFAAAGGSSGFSPTEFMSLSEDIGHNITAIHS 63


>AY069516-1|AAL39661.1|  282|Drosophila melanogaster LD23667p
           protein.
          Length = 282

 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 23/77 (29%), Positives = 39/77 (50%)
 Frame = +3

Query: 255 MMKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVVVRRGDKPQKLQVERLTQA 434
           M+ Q+  P DS +L+ ++H      N  V+ T   I     V +  ++  K+Q +RL   
Sbjct: 47  MVNQLNTPQDSPELKKQLHQIMTYTNQLVTDTNNQINE---VDKCKERHLKIQRDRLVDE 103

Query: 435 FTDCLAKYSSVQKKVSE 485
           FT  L  + SVQ+K ++
Sbjct: 104 FTAALTAFQSVQRKTAD 120


>AE014296-3540|AAF51726.3|  282|Drosophila melanogaster CG5081-PB,
           isoform B protein.
          Length = 282

 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 23/77 (29%), Positives = 39/77 (50%)
 Frame = +3

Query: 255 MMKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVVVRRGDKPQKLQVERLTQA 434
           M+ Q+  P DS +L+ ++H      N  V+ T   I     V +  ++  K+Q +RL   
Sbjct: 47  MVNQLNTPQDSPELKKQLHQIMTYTNQLVTDTNNQINE---VDKCKERHLKIQRDRLVDE 103

Query: 435 FTDCLAKYSSVQKKVSE 485
           FT  L  + SVQ+K ++
Sbjct: 104 FTAALTAFQSVQRKTAD 120


>AE014296-3539|AAF51725.1|  282|Drosophila melanogaster CG5081-PA,
           isoform A protein.
          Length = 282

 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 23/77 (29%), Positives = 39/77 (50%)
 Frame = +3

Query: 255 MMKQIGGPNDSVQLRDKIHDTQQTVNSSVSATARDIQRLGVVVRRGDKPQKLQVERLTQA 434
           M+ Q+  P DS +L+ ++H      N  V+ T   I     V +  ++  K+Q +RL   
Sbjct: 47  MVNQLNTPQDSPELKKQLHQIMTYTNQLVTDTNNQINE---VDKCKERHLKIQRDRLVDE 103

Query: 435 FTDCLAKYSSVQKKVSE 485
           FT  L  + SVQ+K ++
Sbjct: 104 FTAALTAFQSVQRKTAD 120


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,278,434
Number of Sequences: 53049
Number of extensions: 611336
Number of successful extensions: 1399
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1399
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)