Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30241
         (577 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   3.8  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   5.0  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   6.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.6  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   6.6  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   6.6  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   8.7  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    21   8.7  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   8.7  

>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 23  SQPTDRSREISSQVVYQLSYSGLVSSTRRE 112
           S+PTD++  +  Q VY++   G V   R E
Sbjct: 239 SRPTDKALRLPLQDVYKIGGIGTVPVGRVE 268


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 294 AIHLLDSLHRAIHLLDSLHRTMHFLDTLQQAISH 395
           A+  L+ L+   + LDS + +M     + Q I H
Sbjct: 390 ALRALNDLYNVKNTLDSYNGSMEINQNIAQNIDH 423


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 372 TLQQAISHHIKSVHK 416
           TLQ AIS H+K V +
Sbjct: 87  TLQSAISAHMKKVRE 101


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 361 IFWTLFSKLSAIISNQYTKLPTSHEFAWR 447
           + WT   K   I+  +  +LP+  +  WR
Sbjct: 805 LLWTSVKKALMIVGIRPERLPSFDDECWR 833


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 361 IFWTLFSKLSAIISNQYTKLPTSHEFAWR 447
           + WT   K   I+  +  +LP+  +  WR
Sbjct: 843 LLWTSVKKALMIVGIRPERLPSFDDECWR 871


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 372 TLQQAISHHIKSVHK 416
           TLQ AIS H+K V +
Sbjct: 87  TLQSAISAHMKKVRE 101


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 372 TLQQAISHHIKSVHK 416
           TLQ AIS H+K V +
Sbjct: 87  TLQSAISAHMKKVRE 101


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 230 GFSFILYIVG 201
           GFSF+LY+ G
Sbjct: 228 GFSFLLYVSG 237


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 23  SQPTDRSREISSQVVYQLSYSGLVSSTRRE 112
           ++PTD++  +  Q VY++   G V   R E
Sbjct: 182 TRPTDKALRLPLQDVYKIGGIGTVPVGRVE 211


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 23  SQPTDRSREISSQVVYQLSYSGLVSSTRRE 112
           ++PTD++  +  Q VY++   G V   R E
Sbjct: 239 TRPTDKALRLPLQDVYKIGGIGTVPVGRVE 268


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,444
Number of Sequences: 438
Number of extensions: 3148
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)