Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30239
         (708 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2G0T6 Cluster: Major Facilitator Superfamily protein; ...    36   0.98 
UniRef50_Q7XQQ0 Cluster: OSJNBa0084A10.5 protein; n=4; Oryza sat...    33   6.9  
UniRef50_UPI00015B51C8 Cluster: PREDICTED: similar to conserved ...    33   9.1  
UniRef50_Q2ZXM7 Cluster: Putative uncharacterized protein precur...    33   9.1  

>UniRef50_A2G0T6 Cluster: Major Facilitator Superfamily protein;
           n=6; Trichomonas vaginalis G3|Rep: Major Facilitator
           Superfamily protein - Trichomonas vaginalis G3
          Length = 400

 Score = 35.9 bits (79), Expect = 0.98
 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
 Frame = -1

Query: 321 FYVKNAFFGIKVHTLDYIGG--TQSISPSRTVI----IILNILPNKTTYISQV-RVVPFL 163
           F + N FF +  +T  ++G   ++ +   + +I      + +       ISQ+  +VPF 
Sbjct: 276 FTIDNNFFMLAYNTCSFLGDFFSRKVMDKKRIINPVFYFILLCFGFAINISQIPEIVPFA 335

Query: 162 AFCIFLYSGDSFI-C--IITILIKSKYCLTVSFSW 67
           AFC    +G  ++ C  +I +L K KY LT + +W
Sbjct: 336 AFCFSWANGGLYVQCTKLIGMLFKEKYHLTATSTW 370


>UniRef50_Q7XQQ0 Cluster: OSJNBa0084A10.5 protein; n=4; Oryza
           sativa|Rep: OSJNBa0084A10.5 protein - Oryza sativa
           (Rice)
          Length = 720

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
 Frame = +1

Query: 22  SCVSLLQTQTRARARP*EADSQTIFRLDKDGNYTNERITG---IQKNAEGQKWNDPHL*N 192
           SC+ + + QT+A+  P  +D +       D +  NE+I     + + AE  K +D  +  
Sbjct: 290 SCIVIDEEQTKAKYLPVPSDDKVSDEKPDDSSVLNEKIEDDETLAEKAEDDKTSDERVPG 349

Query: 193 VRGLVR*DVQNYY-YCS 240
           V+  +R D  N   YCS
Sbjct: 350 VKNNLRDDCNNLLSYCS 366


>UniRef50_UPI00015B51C8 Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 463

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = -1

Query: 204 KTTYISQVRVVPFLAFCIFLYSGDSFICIITILIKSKYCLTVSF 73
           K T+IS ++   FL++  F YS   FICI   +++    LTVSF
Sbjct: 65  KRTFISIIQSTAFLSWSAFAYS--MFICIFRRMLRHFNILTVSF 106


>UniRef50_Q2ZXM7 Cluster: Putative uncharacterized protein
           precursor; n=1; Streptococcus suis 89/1591|Rep: Putative
           uncharacterized protein precursor - Streptococcus suis
           89/1591
          Length = 254

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 18/68 (26%), Positives = 34/68 (50%)
 Frame = -1

Query: 273 YIGGTQSISPSRTVIIILNILPNKTTYISQVRVVPFLAFCIFLYSGDSFICIITILIKSK 94
           Y+G  Q +    T ++IL        Y+  +     L FCI +++ D+F+ +  + IK K
Sbjct: 37  YLGHYQLVPNVFTWLLILCQDITTGVYLIPIIYTAILFFCIEVFTRDTFVTLRFLSIKDK 96

Query: 93  YCLTVSFS 70
           Y   +++S
Sbjct: 97  YYFLLNYS 104


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,428,974
Number of Sequences: 1657284
Number of extensions: 13605082
Number of successful extensions: 25791
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25787
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)