Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30239
         (708 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058580-1|AAL13809.1|  453|Drosophila melanogaster LD27389p pro...    29   4.7  
AF012089-2|AAB65750.2|  452|Drosophila melanogaster phenylalanyl...    29   4.7  
AE013599-1806|AAF58310.1|  453|Drosophila melanogaster CG13348-P...    29   4.7  
AY058426-1|AAL13655.1|  524|Drosophila melanogaster GH20281p pro...    29   8.2  
AE014296-3047|AAF49240.2|  524|Drosophila melanogaster CG4120-PA...    29   8.2  

>AY058580-1|AAL13809.1|  453|Drosophila melanogaster LD27389p
           protein.
          Length = 453

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -1

Query: 576 DGWTS-SPSYLMVIGAHRHLQRKWP 505
           DGWT+ +P  L  +GA++HLQ   P
Sbjct: 46  DGWTNVTPKILSYVGANKHLQTDHP 70


>AF012089-2|AAB65750.2|  452|Drosophila melanogaster phenylalanyl
           tRNA synthetase protein.
          Length = 452

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -1

Query: 576 DGWTS-SPSYLMVIGAHRHLQRKWP 505
           DGWT+ +P  L  +GA++HLQ   P
Sbjct: 46  DGWTNVTPKILSYVGANKHLQTDHP 70


>AE013599-1806|AAF58310.1|  453|Drosophila melanogaster CG13348-PA
           protein.
          Length = 453

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -1

Query: 576 DGWTS-SPSYLMVIGAHRHLQRKWP 505
           DGWT+ +P  L  +GA++HLQ   P
Sbjct: 46  DGWTNVTPKILSYVGANKHLQTDHP 70


>AY058426-1|AAL13655.1|  524|Drosophila melanogaster GH20281p
           protein.
          Length = 524

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 74  KLTVKQYFDL-IRMVIIQMKESPEYKKMQKARNGTTLTCEMYV 199
           ++ +  +FDL +R  + +   +P YKK  +A +    TC MYV
Sbjct: 237 EVLMDSFFDLGVRPSLYRYIPTPTYKKFSRAMDEIFDTCSMYV 279


>AE014296-3047|AAF49240.2|  524|Drosophila melanogaster CG4120-PA
           protein.
          Length = 524

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 74  KLTVKQYFDL-IRMVIIQMKESPEYKKMQKARNGTTLTCEMYV 199
           ++ +  +FDL +R  + +   +P YKK  +A +    TC MYV
Sbjct: 237 EVLMDSFFDLGVRPSLYRYIPTPTYKKFSRAMDEIFDTCSMYV 279


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,879,387
Number of Sequences: 53049
Number of extensions: 649263
Number of successful extensions: 1336
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)