Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30237
(647 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P53621 Cluster: Coatomer subunit alpha (Alpha-coat prot... 111 2e-23
UniRef50_Q8R393 Cluster: Copa protein; n=3; Euarchontoglires|Rep... 109 7e-23
UniRef50_Q01B79 Cluster: WD40 repeat-containing protein; n=2; Vi... 87 3e-16
UniRef50_Q4Q2B0 Cluster: Coatomer alpha subunit, putative; n=4; ... 62 9e-09
UniRef50_Q9FVJ9 Cluster: COP alpha homolog; n=3; BEP clade|Rep: ... 58 2e-07
UniRef50_A2F6V2 Cluster: Cotamer alpha, putative; n=1; Trichomon... 56 6e-07
UniRef50_A3FPY1 Cluster: Coatomer protein complex subunit alpha,... 54 2e-06
UniRef50_Q6C5A1 Cluster: Yarrowia lipolytica chromosome E of str... 52 9e-06
UniRef50_A2DDS5 Cluster: Cotamer alpha, putative; n=1; Trichomon... 51 2e-05
UniRef50_Q4P6U0 Cluster: Putative uncharacterized protein; n=5; ... 50 4e-05
UniRef50_A6R408 Cluster: Coatomer alpha subunit; n=13; Ascomycot... 48 2e-04
UniRef50_Q0UYS9 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_P53622 Cluster: Coatomer subunit alpha; n=18; Dikarya|R... 43 0.006
UniRef50_A5K1R5 Cluster: Coatomer alpha subunit, putative; n=1; ... 42 0.010
UniRef50_Q229R4 Cluster: Coatomer WD associated domain containin... 42 0.013
UniRef50_A2DQ95 Cluster: Cotamer alpha, putative; n=1; Trichomon... 41 0.030
UniRef50_A0CRE9 Cluster: Chromosome undetermined scaffold_25, wh... 38 0.16
UniRef50_A2EA68 Cluster: WD repeat protein, putative; n=1; Trich... 37 0.48
UniRef50_Q3BY32 Cluster: [acyl-carrier protein] S-malonyltransfe... 35 2.0
UniRef50_A0CVG9 Cluster: Chromosome undetermined scaffold_29, wh... 34 2.6
UniRef50_A7APR7 Cluster: WD domain, G-beta repeat domain contain... 33 6.0
UniRef50_Q993S7 Cluster: RNA-dependant RNA polymerase; n=74; Ban... 33 7.9
UniRef50_Q22AA0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
>UniRef50_P53621 Cluster: Coatomer subunit alpha (Alpha-coat protein)
(Alpha-COP) (HEPCOP) (HEP- COP) [Contains: Xenin
(Xenopsin-related peptide); Proxenin]; n=82;
Eukaryota|Rep: Coatomer subunit alpha (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP- COP) [Contains: Xenin
(Xenopsin-related peptide); Proxenin] - Homo sapiens
(Human)
Length = 1224
Score = 111 bits (266), Expect = 2e-23
Identities = 49/62 (79%), Positives = 55/62 (88%)
Frame = +3
Query: 60 ALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEHNPFS 239
ALN+FFKLKN++TAA+FARRLLELGP+PEVAQQ RKIL ACEK PTD +QL YD HNPF
Sbjct: 1108 ALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFD 1167
Query: 240 IC 245
IC
Sbjct: 1168 IC 1169
Score = 79.8 bits (188), Expect = 5e-14
Identities = 46/135 (34%), Positives = 57/135 (42%)
Frame = +2
Query: 2 AYFTHCKLQPVHQILTLRHGPQHVLQAEELPHGRFVXXXXXXXXXXXXXXXXSAEDPPGL 181
AYFTH LQPVH IL LR + + + +
Sbjct: 1089 AYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSAC 1148
Query: 182 REXXXXXXXXXXXXXXXVQHLRDQHKPIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAE 361
+ ++PIYRGKP EKC L A + PE KG++C V V E
Sbjct: 1149 EKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTE 1208
Query: 362 IGKDALGLRICPLQF 406
IGKD +GLRI PLQF
Sbjct: 1209 IGKDVIGLRISPLQF 1223
>UniRef50_Q8R393 Cluster: Copa protein; n=3; Euarchontoglires|Rep:
Copa protein - Mus musculus (Mouse)
Length = 580
Score = 109 bits (261), Expect = 7e-23
Identities = 49/62 (79%), Positives = 54/62 (87%)
Frame = +3
Query: 60 ALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEHNPFS 239
ALN+FFKLKN++TAA+FARRLLELGP+PEVAQQ RKIL ACEK PTD QL YD HNPF
Sbjct: 464 ALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDACQLNYDMHNPFD 523
Query: 240 IC 245
IC
Sbjct: 524 IC 525
Score = 79.8 bits (188), Expect = 5e-14
Identities = 46/135 (34%), Positives = 57/135 (42%)
Frame = +2
Query: 2 AYFTHCKLQPVHQILTLRHGPQHVLQAEELPHGRFVXXXXXXXXXXXXXXXXSAEDPPGL 181
AYFTH LQPVH IL LR + + + +
Sbjct: 445 AYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSAC 504
Query: 182 REXXXXXXXXXXXXXXXVQHLRDQHKPIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAE 361
+ ++PIYRGKP EKC L A + PE KG++C V V E
Sbjct: 505 EKNPTDACQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTE 564
Query: 362 IGKDALGLRICPLQF 406
IGKD +GLRI PLQF
Sbjct: 565 IGKDVIGLRISPLQF 579
>UniRef50_Q01B79 Cluster: WD40 repeat-containing protein; n=2;
Viridiplantae|Rep: WD40 repeat-containing protein -
Ostreococcus tauri
Length = 1284
Score = 87.4 bits (207), Expect = 3e-16
Identities = 40/76 (52%), Positives = 53/76 (69%)
Frame = +3
Query: 18 ASSSPCTRSSRCGMALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPT 197
A P S A+++FFKLKNY TAA+F RRLLEL P +VA QA+++LQAC++ P
Sbjct: 1154 AEMQPIHVSLSLRSAMSIFFKLKNYATAATFCRRLLELNPPVKVATQAKQVLQACDRAPK 1213
Query: 198 DEHQLLYDEHNPFSIC 245
DE ++ YD HNPF +C
Sbjct: 1214 DEVEVNYDFHNPFVVC 1229
Score = 48.4 bits (110), Expect = 1e-04
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +2
Query: 260 PIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAEIGKDALGLRIC 394
PIY+G + C +C A F+ E G +C VC + +IG DA GL +C
Sbjct: 1235 PIYKGTKDCMCPMCGAHFVIEQSGNVCGVCSLGKIGADATGL-VC 1278
>UniRef50_Q4Q2B0 Cluster: Coatomer alpha subunit, putative; n=4;
Trypanosomatidae|Rep: Coatomer alpha subunit, putative -
Leishmania major
Length = 1196
Score = 62.5 bits (145), Expect = 9e-09
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = +3
Query: 60 ALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEHNPFS 239
A++ +K KN +TAA ARRLLE P AQQA I+ ++ PT+ ++ YDE NPF+
Sbjct: 1083 AMSKAYKQKNIKTAAEVARRLLEQDPPQNKAQQAAAIIAEADRNPTNAIEIEYDERNPFT 1142
Query: 240 IC 245
IC
Sbjct: 1143 IC 1144
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +2
Query: 254 HKPIYRGKPEE-KCSLCAASFMPEHKGKLCPVCGVAEIGKDALGL 385
+KP+Y+G +CS C + P KG LCPVC +A+IG D+ GL
Sbjct: 1148 YKPMYKGVVSPVRCSYCFSPANPSCKGTLCPVCKLAKIGVDSAGL 1192
>UniRef50_Q9FVJ9 Cluster: COP alpha homolog; n=3; BEP clade|Rep: COP
alpha homolog - Triticum aestivum (Wheat)
Length = 530
Score = 57.6 bits (133), Expect = 2e-07
Identities = 28/63 (44%), Positives = 38/63 (60%)
Frame = +3
Query: 60 ALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEHNPFS 239
A+ + +K KN+ TA FAR LLE P A++AR++ Q C D H+L YD NPF
Sbjct: 417 AMALCYKQKNFATAEHFARLLLENSPNEVQAKKARQVQQQC-NGKQDSHELNYDYRNPFV 475
Query: 240 ICG 248
+CG
Sbjct: 476 VCG 478
Score = 53.6 bits (123), Expect = 4e-06
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +2
Query: 260 PIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAEIGKDALGLRICPLQ 403
PIYRG+ + C+ C + F+P +G+LC +C +A +G DA GL P Q
Sbjct: 483 PIYRGQKDISCAYCGSRFVPNIEGQLCTICELAVVGADASGLLCSPTQ 530
>UniRef50_A2F6V2 Cluster: Cotamer alpha, putative; n=1; Trichomonas
vaginalis G3|Rep: Cotamer alpha, putative - Trichomonas
vaginalis G3
Length = 1116
Score = 56.4 bits (130), Expect = 6e-07
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +2
Query: 260 PIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAEIGKDALGLRI 391
PIYRG C LC +SF+ +KGKLCPVC + EIG ++ GL +
Sbjct: 1069 PIYRGTKSIFCPLCKSSFLSRYKGKLCPVCNLCEIGYESKGLTL 1112
>UniRef50_A3FPY1 Cluster: Coatomer protein complex subunit alpha,
putative; n=3; Eukaryota|Rep: Coatomer protein complex
subunit alpha, putative - Cryptosporidium parvum Iowa II
Length = 1382
Score = 54.4 bits (125), Expect = 2e-06
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +3
Query: 60 ALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEH 227
A+ + +K KNY T ASFA+RLL + P E ++ +KIL AC++ TDEH + +D H
Sbjct: 1270 AMGIAWKHKNYITTASFAKRLLGI-PNIEDVEKTQKILAACDQKATDEHNINFDPH 1324
Score = 34.7 bits (76), Expect = 2.0
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 287 KCSLCAASFMPEHKGKLCPVCGVAEIGKDALGL 385
KC +C+++ + + G++CP C EIG +G+
Sbjct: 1349 KCPVCSSNHLSQFTGEICPNCKTGEIGLRVIGI 1381
>UniRef50_Q6C5A1 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 1244
Score = 52.4 bits (120), Expect = 9e-06
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +3
Query: 57 MALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEHNPF 236
+A+ FKLKNY +A+ +A + LE P P A++ARK+ + P D +L +D F
Sbjct: 1132 VAMTQAFKLKNYASASVYAEKFLETNPAPAQAEKARKVKHRADAQPLDAIELDFDVTANF 1191
Query: 237 SIC 245
+IC
Sbjct: 1192 AIC 1194
Score = 43.2 bits (97), Expect = 0.006
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +2
Query: 257 KPIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAEIGKDALGLRI 391
KPIY G EK A ++P+HKG+L + G++ IG + GL++
Sbjct: 1199 KPIYPGDASEKDPFTGAEYLPKHKGQLDVIGGISAIGAPSTGLKL 1243
>UniRef50_A2DDS5 Cluster: Cotamer alpha, putative; n=1; Trichomonas
vaginalis G3|Rep: Cotamer alpha, putative - Trichomonas
vaginalis G3
Length = 1123
Score = 51.2 bits (117), Expect = 2e-05
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +2
Query: 260 PIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAEIGKDALGLRI 391
PIYRGKP C LC ++ G+LCP+C + E G GL+I
Sbjct: 1074 PIYRGKPSISCPLCGCQTDSKNAGQLCPICEICEFGGQPTGLKI 1117
Score = 50.4 bits (115), Expect = 4e-05
Identities = 26/61 (42%), Positives = 34/61 (55%)
Frame = +3
Query: 60 ALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEHNPFS 239
A+ M K NY TA S RLL+L P ++A QAR L+ K T+ + Y+E NPF
Sbjct: 1007 AVRMAMKYHNYLTAKSLISRLLDLEPNEKIAGQARASLEQANKVGTNALNINYNERNPFF 1066
Query: 240 I 242
I
Sbjct: 1067 I 1067
>UniRef50_Q4P6U0 Cluster: Putative uncharacterized protein; n=5;
Fungi/Metazoa group|Rep: Putative uncharacterized protein
- Ustilago maydis (Smut fungus)
Length = 1238
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +3
Query: 78 KLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTD 200
K+ NY AASFA+RL++L P P VAQ+A++I+ E++P D
Sbjct: 1128 KVNNYAMAASFAKRLMDLSPAPAVAQKAQQIISLAERSPRD 1168
Score = 36.3 bits (80), Expect = 0.64
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 296 LCAASFMPEHKGKLCPVCGVAEIGKDALGLR 388
L A ++PE KG LC + ++E+GK A GLR
Sbjct: 1204 LTGARYLPEFKGTLCKITQISEVGKLASGLR 1234
>UniRef50_A6R408 Cluster: Coatomer alpha subunit; n=13;
Ascomycota|Rep: Coatomer alpha subunit - Ajellomyces
capsulatus NAm1
Length = 1224
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +3
Query: 60 ALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEHNPFS 239
A+ + F +N+ +A SFA R++ G + +ARK+ CE++P D+ + +D+ F
Sbjct: 1108 AMKLAFSKQNFSSALSFANRMISNGGVAKFIDEARKVKAQCERSPQDKIDIEFDQFAEFD 1167
Query: 240 IC 245
IC
Sbjct: 1168 IC 1169
Score = 43.6 bits (98), Expect = 0.004
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +2
Query: 260 PIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAEIGKDALGLRI 391
PIY G P C A + ++KG +C V V EIG A GLR+
Sbjct: 1175 PIYSGSPSVTCPFTGAKYHEQYKGSVCRVSQVTEIGAPASGLRL 1218
>UniRef50_Q0UYS9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1161
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +2
Query: 254 HKPIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAEIGKDALGLRI 391
H PIY G P C A + ++KG +C VC V +IG A GLR+
Sbjct: 1114 HTPIYGGSPSAACPYDGAKYHAKYKGTVCKVCEVCQIGAPASGLRL 1159
Score = 41.1 bits (92), Expect = 0.022
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +3
Query: 39 RSSRCGMALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLY 218
RS A+N K K TA +FA LL+ ++ + A++I E+ P D ++ +
Sbjct: 1042 RSIPLSAAMNFAHKNKQLNTALNFANALLDRTGNAKMKESAKRIKTIAERNPADAIEIDF 1101
Query: 219 DEHNPFSIC 245
D+ F IC
Sbjct: 1102 DQFADFEIC 1110
>UniRef50_P53622 Cluster: Coatomer subunit alpha; n=18; Dikarya|Rep:
Coatomer subunit alpha - Saccharomyces cerevisiae
(Baker's yeast)
Length = 1201
Score = 43.2 bits (97), Expect = 0.006
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = +3
Query: 18 ASSSPCTRSSRCGMALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPT 197
A SP R++ +A++ FK KN+ A+ FA L++ A+QARKI + +
Sbjct: 1075 AKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRAEQARKIKNKADSMAS 1134
Query: 198 DEHQLLYDEHNPFSIC 245
D + +D + F IC
Sbjct: 1135 DAIPIDFDPYAKFDIC 1150
>UniRef50_A5K1R5 Cluster: Coatomer alpha subunit, putative; n=1;
Plasmodium vivax|Rep: Coatomer alpha subunit, putative -
Plasmodium vivax
Length = 1398
Score = 42.3 bits (95), Expect = 0.010
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Frame = +3
Query: 63 LNMFFKLKNYRTAASFARRLLE------LGPRPEVAQQARKILQACEKTPTDEHQLLYD- 221
+ + +K +NY TA SFA+RL+ G E+ + A+KIL CE+ T++H + YD
Sbjct: 1277 MGLAWKAQNYVTAGSFAKRLINGNYESIKGSEEEIVK-AKKILLMCEQKSTEQHSIDYDP 1335
Query: 222 -EHNPFSICGI 251
+++ +C +
Sbjct: 1336 NDYHNMKVCSV 1346
Score = 36.3 bits (80), Expect = 0.64
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +2
Query: 269 RGKPEEK---CSLCAASFMPEHKGKLCPVCGVAEIGKDALG 382
R KP E+ C C + E+ K+CP C +A++GK ALG
Sbjct: 1350 RIKPNEETVSCPFCQSVSKREYTSKMCPNCLIAQLGKKALG 1390
>UniRef50_Q229R4 Cluster: Coatomer WD associated domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Coatomer
WD associated domain containing protein - Tetrahymena
thermophila SB210
Length = 1227
Score = 41.9 bits (94), Expect = 0.013
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Frame = +3
Query: 30 PCTRSSRCGMALNMFFKLKNYRTAASFARRLL---ELGP---RPEVAQQARKILQACEKT 191
P R A++ +K KN+ + FA++L+ E P +PEV Q A+K L+ACE
Sbjct: 1093 PIHRVLTLKQAMSAAYKNKNFIYCSYFAKKLIRVVEANPNAAKPEVLQSAQKFLRACETQ 1152
Query: 192 PTDEHQLLYDE 224
T+ Q+++D+
Sbjct: 1153 GTNAQQIVFDD 1163
>UniRef50_A2DQ95 Cluster: Cotamer alpha, putative; n=1; Trichomonas
vaginalis G3|Rep: Cotamer alpha, putative - Trichomonas
vaginalis G3
Length = 1080
Score = 40.7 bits (91), Expect = 0.030
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 290 CSLCAASFMPEHKGKLCPVCGVAEIGKDALGLR 388
C C ++F + KG LC +C ++EIGK +LG++
Sbjct: 1048 CPFCKSTFSQDEKGNLCSICQLSEIGKISLGMK 1080
>UniRef50_A0CRE9 Cluster: Chromosome undetermined scaffold_25, whole
genome shotgun sequence; n=3; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_25, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1192
Score = 38.3 bits (85), Expect = 0.16
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Frame = +3
Query: 30 PCTRSSRCGMALNMFFKLKNYRTAASFAR---RLLELGPR------PEVAQQARKILQAC 182
P RS A+++ +K KNY T + A+ +LLE P+ PEV + +KI C
Sbjct: 1069 PVHRSLTLRAAMSLSYKNKNYLTGSQVAQQLIKLLEQAPKGAAYSKPEVLENVKKIYNNC 1128
Query: 183 EKTPTDEHQLLYD 221
++ P +E+ + ++
Sbjct: 1129 QQNPKNEYNINFE 1141
>UniRef50_A2EA68 Cluster: WD repeat protein, putative; n=1;
Trichomonas vaginalis G3|Rep: WD repeat protein, putative
- Trichomonas vaginalis G3
Length = 1157
Score = 36.7 bits (81), Expect = 0.48
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 272 GKPEEKCSLCAASFMPEHKGKLCPVCGVAEIGKDALGLRI 391
G+ + C C A++ H +LC VC ++++G GL+I
Sbjct: 1116 GEQKVSCPFCGATYKASHANELCSVCQLSKVGGIGTGLKI 1155
>UniRef50_Q3BY32 Cluster: [acyl-carrier protein]
S-malonyltransferase; n=5; Xanthomonadaceae|Rep:
[acyl-carrier protein] S-malonyltransferase -
Xanthomonas campestris pv. vesicatoria (strain 85-10)
Length = 306
Score = 34.7 bits (76), Expect = 2.0
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 111 ARRLLELGPRPEVAQQARKILQACEKTPTDE 203
AR LELGP +A+ AR++L ACE DE
Sbjct: 257 ARVFLELGPGSALARMAREVLPACEARSVDE 287
>UniRef50_A0CVG9 Cluster: Chromosome undetermined scaffold_29, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_29,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 182
Score = 34.3 bits (75), Expect = 2.6
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +3
Query: 75 FKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEHN 230
F++K R+++++ P P Q ++LQA E+ P HQ + +HN
Sbjct: 61 FQIKRPTEVEDQIRKIVKIEPSPAQFDQDDELLQAQEQEPDQSHQTNHSDHN 112
>UniRef50_A7APR7 Cluster: WD domain, G-beta repeat domain containing
protein; n=1; Babesia bovis|Rep: WD domain, G-beta repeat
domain containing protein - Babesia bovis
Length = 1266
Score = 33.1 bits (72), Expect = 6.0
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Frame = +3
Query: 63 LNMFFKLKNYRTAASFARRLLEL------GPRPEVAQQARKILQACEKTPTDEHQLLYD- 221
+ + +K +NY TA RLL L G E+ Q+A++I CEK + + L D
Sbjct: 1158 MGIMWKAQNYITAKKLITRLLSLDVSNIDGAEDEM-QKAKRIYALCEKKGVETYALDCDE 1216
Query: 222 -EHNPFSICGI 251
E+N +IC I
Sbjct: 1217 GEYNDLNICTI 1227
>UniRef50_Q993S7 Cluster: RNA-dependant RNA polymerase; n=74; Banana
mild mosaic virus|Rep: RNA-dependant RNA polymerase -
Banana mild mosaic virus
Length = 1771
Score = 32.7 bits (71), Expect = 7.9
Identities = 11/42 (26%), Positives = 25/42 (59%)
Frame = -3
Query: 435 RDFNVQVYLLNCKGQIRRPSASLPISATPHTGHSFPLCSGMK 310
++ +V Y ++ K ++ + +P+S+TP HS P+C ++
Sbjct: 38 QNLSVSPYCMSDKARLLLDESGIPLSSTPFVSHSHPVCKTLE 79
>UniRef50_Q22AA0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1717
Score = 32.7 bits (71), Expect = 7.9
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 15 TASSSPCTRSSRCGMALNMFFKLKNYRTAASFARRLLE---LGPRPEVAQQARKILQACE 185
T +SP SS G A N+ K KNY + +SF +LE L + ++++ C+
Sbjct: 982 TNDNSPLPLSSNRGSARNVLIKQKNYNSQSSFPMIVLEQNNLAENDLSSSSNQEVVNNCQ 1041
Query: 186 KTPTDEHQLLYD 221
+ + L+D
Sbjct: 1042 QKQNKFSKFLFD 1053
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,685,025
Number of Sequences: 1657284
Number of extensions: 7987213
Number of successful extensions: 26683
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 25538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26670
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -