Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30237
(647 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U24105-1|AAB70879.1| 1224|Homo sapiens coatomer protein protein. 111 3e-24
BC038447-1|AAH38447.1| 1233|Homo sapiens COPA protein protein. 111 3e-24
AL513282-3|CAI12455.1| 1233|Homo sapiens coatomer protein comple... 111 3e-24
AL513282-2|CAI12454.1| 1224|Homo sapiens coatomer protein comple... 111 3e-24
AL445230-2|CAI15004.1| 1233|Homo sapiens coatomer protein comple... 111 3e-24
AL445230-1|CAI15005.1| 1224|Homo sapiens coatomer protein comple... 111 3e-24
BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA seq... 31 2.7
AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA seq... 31 2.7
AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA seq... 31 2.7
AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA seq... 31 2.7
AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA seq... 31 2.7
AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA seq... 31 2.7
AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA seq... 31 2.7
AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA seq... 31 2.7
AJ306906-1|CAC37630.1| 2673|Homo sapiens fibulin-6 protein. 31 2.7
AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein. 31 2.7
BC113602-1|AAI13603.1| 553|Homo sapiens interleukin 20 receptor... 30 6.2
BC113574-1|AAI13575.1| 553|Homo sapiens interleukin 20 receptor... 30 6.2
BC071962-1|AAH71962.1| 503|Homo sapiens ZNF574 protein protein. 30 6.2
BC001184-1|AAH01184.2| 896|Homo sapiens ZNF574 protein protein. 30 6.2
AY358883-1|AAQ89242.1| 442|Homo sapiens IL20-Ra protein. 30 6.2
AL137516-1|CAB70782.1| 644|Homo sapiens hypothetical protein pr... 30 6.2
AL135902-1|CAC38375.1| 553|Homo sapiens interleukin 20 receptor... 30 6.2
AK131418-1|BAD18565.1| 896|Homo sapiens protein ( Homo sapiens ... 30 6.2
AK131369-1|BAD18520.1| 986|Homo sapiens protein ( Homo sapiens ... 30 6.2
AK074788-1|BAC11210.1| 394|Homo sapiens protein ( Homo sapiens ... 30 6.2
AK025712-1|BAB15225.1| 394|Homo sapiens protein ( Homo sapiens ... 30 6.2
BC146657-1|AAI46658.1| 771|Homo sapiens CGN protein protein. 30 8.2
AL365436-3|CAI16590.1| 1203|Homo sapiens cingulin protein. 30 8.2
AF263462-1|AAF74498.1| 1203|Homo sapiens cingulin protein. 30 8.2
AB037740-1|BAA92557.1| 1208|Homo sapiens KIAA1319 protein protein. 30 8.2
>U24105-1|AAB70879.1| 1224|Homo sapiens coatomer protein protein.
Length = 1224
Score = 111 bits (266), Expect = 3e-24
Identities = 49/62 (79%), Positives = 55/62 (88%)
Frame = +3
Query: 60 ALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEHNPFS 239
ALN+FFKLKN++TAA+FARRLLELGP+PEVAQQ RKIL ACEK PTD +QL YD HNPF
Sbjct: 1108 ALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFD 1167
Query: 240 IC 245
IC
Sbjct: 1168 IC 1169
Score = 79.8 bits (188), Expect = 8e-15
Identities = 46/135 (34%), Positives = 57/135 (42%)
Frame = +2
Query: 2 AYFTHCKLQPVHQILTLRHGPQHVLQAEELPHGRFVXXXXXXXXXXXXXXXXSAEDPPGL 181
AYFTH LQPVH IL LR + + + +
Sbjct: 1089 AYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSAC 1148
Query: 182 REXXXXXXXXXXXXXXXVQHLRDQHKPIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAE 361
+ ++PIYRGKP EKC L A + PE KG++C V V E
Sbjct: 1149 EKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTE 1208
Query: 362 IGKDALGLRICPLQF 406
IGKD +GLRI PLQF
Sbjct: 1209 IGKDVIGLRISPLQF 1223
>BC038447-1|AAH38447.1| 1233|Homo sapiens COPA protein protein.
Length = 1233
Score = 111 bits (266), Expect = 3e-24
Identities = 49/62 (79%), Positives = 55/62 (88%)
Frame = +3
Query: 60 ALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEHNPFS 239
ALN+FFKLKN++TAA+FARRLLELGP+PEVAQQ RKIL ACEK PTD +QL YD HNPF
Sbjct: 1117 ALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFD 1176
Query: 240 IC 245
IC
Sbjct: 1177 IC 1178
Score = 79.8 bits (188), Expect = 8e-15
Identities = 46/135 (34%), Positives = 57/135 (42%)
Frame = +2
Query: 2 AYFTHCKLQPVHQILTLRHGPQHVLQAEELPHGRFVXXXXXXXXXXXXXXXXSAEDPPGL 181
AYFTH LQPVH IL LR + + + +
Sbjct: 1098 AYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSAC 1157
Query: 182 REXXXXXXXXXXXXXXXVQHLRDQHKPIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAE 361
+ ++PIYRGKP EKC L A + PE KG++C V V E
Sbjct: 1158 EKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTE 1217
Query: 362 IGKDALGLRICPLQF 406
IGKD +GLRI PLQF
Sbjct: 1218 IGKDVIGLRISPLQF 1232
>AL513282-3|CAI12455.1| 1233|Homo sapiens coatomer protein complex,
subunit alpha protein.
Length = 1233
Score = 111 bits (266), Expect = 3e-24
Identities = 49/62 (79%), Positives = 55/62 (88%)
Frame = +3
Query: 60 ALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEHNPFS 239
ALN+FFKLKN++TAA+FARRLLELGP+PEVAQQ RKIL ACEK PTD +QL YD HNPF
Sbjct: 1117 ALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFD 1176
Query: 240 IC 245
IC
Sbjct: 1177 IC 1178
Score = 79.8 bits (188), Expect = 8e-15
Identities = 46/135 (34%), Positives = 57/135 (42%)
Frame = +2
Query: 2 AYFTHCKLQPVHQILTLRHGPQHVLQAEELPHGRFVXXXXXXXXXXXXXXXXSAEDPPGL 181
AYFTH LQPVH IL LR + + + +
Sbjct: 1098 AYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSAC 1157
Query: 182 REXXXXXXXXXXXXXXXVQHLRDQHKPIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAE 361
+ ++PIYRGKP EKC L A + PE KG++C V V E
Sbjct: 1158 EKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTE 1217
Query: 362 IGKDALGLRICPLQF 406
IGKD +GLRI PLQF
Sbjct: 1218 IGKDVIGLRISPLQF 1232
>AL513282-2|CAI12454.1| 1224|Homo sapiens coatomer protein complex,
subunit alpha protein.
Length = 1224
Score = 111 bits (266), Expect = 3e-24
Identities = 49/62 (79%), Positives = 55/62 (88%)
Frame = +3
Query: 60 ALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEHNPFS 239
ALN+FFKLKN++TAA+FARRLLELGP+PEVAQQ RKIL ACEK PTD +QL YD HNPF
Sbjct: 1108 ALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFD 1167
Query: 240 IC 245
IC
Sbjct: 1168 IC 1169
Score = 79.8 bits (188), Expect = 8e-15
Identities = 46/135 (34%), Positives = 57/135 (42%)
Frame = +2
Query: 2 AYFTHCKLQPVHQILTLRHGPQHVLQAEELPHGRFVXXXXXXXXXXXXXXXXSAEDPPGL 181
AYFTH LQPVH IL LR + + + +
Sbjct: 1089 AYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSAC 1148
Query: 182 REXXXXXXXXXXXXXXXVQHLRDQHKPIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAE 361
+ ++PIYRGKP EKC L A + PE KG++C V V E
Sbjct: 1149 EKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTE 1208
Query: 362 IGKDALGLRICPLQF 406
IGKD +GLRI PLQF
Sbjct: 1209 IGKDVIGLRISPLQF 1223
>AL445230-2|CAI15004.1| 1233|Homo sapiens coatomer protein complex,
subunit alpha protein.
Length = 1233
Score = 111 bits (266), Expect = 3e-24
Identities = 49/62 (79%), Positives = 55/62 (88%)
Frame = +3
Query: 60 ALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEHNPFS 239
ALN+FFKLKN++TAA+FARRLLELGP+PEVAQQ RKIL ACEK PTD +QL YD HNPF
Sbjct: 1117 ALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFD 1176
Query: 240 IC 245
IC
Sbjct: 1177 IC 1178
Score = 79.8 bits (188), Expect = 8e-15
Identities = 46/135 (34%), Positives = 57/135 (42%)
Frame = +2
Query: 2 AYFTHCKLQPVHQILTLRHGPQHVLQAEELPHGRFVXXXXXXXXXXXXXXXXSAEDPPGL 181
AYFTH LQPVH IL LR + + + +
Sbjct: 1098 AYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSAC 1157
Query: 182 REXXXXXXXXXXXXXXXVQHLRDQHKPIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAE 361
+ ++PIYRGKP EKC L A + PE KG++C V V E
Sbjct: 1158 EKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTE 1217
Query: 362 IGKDALGLRICPLQF 406
IGKD +GLRI PLQF
Sbjct: 1218 IGKDVIGLRISPLQF 1232
>AL445230-1|CAI15005.1| 1224|Homo sapiens coatomer protein complex,
subunit alpha protein.
Length = 1224
Score = 111 bits (266), Expect = 3e-24
Identities = 49/62 (79%), Positives = 55/62 (88%)
Frame = +3
Query: 60 ALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEHNPFS 239
ALN+FFKLKN++TAA+FARRLLELGP+PEVAQQ RKIL ACEK PTD +QL YD HNPF
Sbjct: 1108 ALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFD 1167
Query: 240 IC 245
IC
Sbjct: 1168 IC 1169
Score = 79.8 bits (188), Expect = 8e-15
Identities = 46/135 (34%), Positives = 57/135 (42%)
Frame = +2
Query: 2 AYFTHCKLQPVHQILTLRHGPQHVLQAEELPHGRFVXXXXXXXXXXXXXXXXSAEDPPGL 181
AYFTH LQPVH IL LR + + + +
Sbjct: 1089 AYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSAC 1148
Query: 182 REXXXXXXXXXXXXXXXVQHLRDQHKPIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAE 361
+ ++PIYRGKP EKC L A + PE KG++C V V E
Sbjct: 1149 EKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTE 1208
Query: 362 IGKDALGLRICPLQF 406
IGKD +GLRI PLQF
Sbjct: 1209 IGKDVIGLRISPLQF 1223
>BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone RP11-465I11 on chromosome 1 Contains part of
the gene for hemicentin (FIBL-6). ).
Length = 5635
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 193 GVFSQAWRIFRACWATSGRGPSSRRRLANE 104
G FSQ W +RAC T G+G R RL N+
Sbjct: 4530 GGFSQ-WSAWRACSVTCGKGIQKRSRLCNQ 4558
>AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-268N14 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 193 GVFSQAWRIFRACWATSGRGPSSRRRLANE 104
G FSQ W +RAC T G+G R RL N+
Sbjct: 4530 GGFSQ-WSAWRACSVTCGKGIQKRSRLCNQ 4558
>AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-77J13 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 193 GVFSQAWRIFRACWATSGRGPSSRRRLANE 104
G FSQ W +RAC T G+G R RL N+
Sbjct: 4530 GGFSQ-WSAWRACSVTCGKGIQKRSRLCNQ 4558
>AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-164L12 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 193 GVFSQAWRIFRACWATSGRGPSSRRRLANE 104
G FSQ W +RAC T G+G R RL N+
Sbjct: 4530 GGFSQ-WSAWRACSVTCGKGIQKRSRLCNQ 4558
>AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-174L6 on chromosome 1 Contains the3' end
of the gene for hemicentin, the PRG4 gene for
proteoglycan 4 ).
Length = 5635
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 193 GVFSQAWRIFRACWATSGRGPSSRRRLANE 104
G FSQ W +RAC T G+G R RL N+
Sbjct: 4530 GGFSQ-WSAWRACSVTCGKGIQKRSRLCNQ 4558
>AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-153O3 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 193 GVFSQAWRIFRACWATSGRGPSSRRRLANE 104
G FSQ W +RAC T G+G R RL N+
Sbjct: 4530 GGFSQ-WSAWRACSVTCGKGIQKRSRLCNQ 4558
>AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-118G19 on chromosome 1q25.1-31.1 Contains
the 5' end of the gene for hemicentin. ).
Length = 5635
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 193 GVFSQAWRIFRACWATSGRGPSSRRRLANE 104
G FSQ W +RAC T G+G R RL N+
Sbjct: 4530 GGFSQ-WSAWRACSVTCGKGIQKRSRLCNQ 4558
>AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-248A21 on chromosome 1q31.1-31.3 Contains
part of the gene for hemicentin (FIBL-6). ).
Length = 5635
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 193 GVFSQAWRIFRACWATSGRGPSSRRRLANE 104
G FSQ W +RAC T G+G R RL N+
Sbjct: 4530 GGFSQ-WSAWRACSVTCGKGIQKRSRLCNQ 4558
>AJ306906-1|CAC37630.1| 2673|Homo sapiens fibulin-6 protein.
Length = 2673
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 193 GVFSQAWRIFRACWATSGRGPSSRRRLANE 104
G FSQ W +RAC T G+G R RL N+
Sbjct: 1568 GGFSQ-WSAWRACSVTCGKGIQKRSRLCNQ 1596
>AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein.
Length = 5636
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 193 GVFSQAWRIFRACWATSGRGPSSRRRLANE 104
G FSQ W +RAC T G+G R RL N+
Sbjct: 4531 GGFSQ-WSAWRACSVTCGKGIQKRSRLCNQ 4559
>BC113602-1|AAI13603.1| 553|Homo sapiens interleukin 20 receptor,
alpha protein.
Length = 553
Score = 30.3 bits (65), Expect = 6.2
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 465 IKYVLYVSYLF-YFCSSFVRSFGHSLTSQELMRPTISEVQTII 590
+K++ Y S+L FC S + G SLT QE + TI +T+I
Sbjct: 357 VKHLGYASHLMEIFCDSEENTEGTSLTQQESLSRTIPPDKTVI 399
>BC113574-1|AAI13575.1| 553|Homo sapiens interleukin 20 receptor,
alpha protein.
Length = 553
Score = 30.3 bits (65), Expect = 6.2
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 465 IKYVLYVSYLF-YFCSSFVRSFGHSLTSQELMRPTISEVQTII 590
+K++ Y S+L FC S + G SLT QE + TI +T+I
Sbjct: 357 VKHLGYASHLMEIFCDSEENTEGTSLTQQESLSRTIPPDKTVI 399
>BC071962-1|AAH71962.1| 503|Homo sapiens ZNF574 protein protein.
Length = 503
Score = 30.3 bits (65), Expect = 6.2
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 15 TASSSPCTRSSRCGMALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTP 194
TA++SP + R G+ + KL + T+ RR + G RP K + + T
Sbjct: 331 TATASPAAPARRRGLECSECKKLFSTETSLQVHRR-IHTGERPYPCPDCGKAFR--QSTH 387
Query: 195 TDEHQLLYDEHNPFS--ICG 248
+H+ L+ PF+ +CG
Sbjct: 388 LKDHRRLHTGERPFACEVCG 407
>BC001184-1|AAH01184.2| 896|Homo sapiens ZNF574 protein protein.
Length = 896
Score = 30.3 bits (65), Expect = 6.2
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 15 TASSSPCTRSSRCGMALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTP 194
TA++SP + R G+ + KL + T+ RR + G RP K + + T
Sbjct: 724 TATASPAAPARRRGLECSECKKLFSTETSLQVHRR-IHTGERPYPCPDCGKAFR--QSTH 780
Query: 195 TDEHQLLYDEHNPFS--ICG 248
+H+ L+ PF+ +CG
Sbjct: 781 LKDHRRLHTGERPFACEVCG 800
>AY358883-1|AAQ89242.1| 442|Homo sapiens IL20-Ra protein.
Length = 442
Score = 30.3 bits (65), Expect = 6.2
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 465 IKYVLYVSYLF-YFCSSFVRSFGHSLTSQELMRPTISEVQTII 590
+K++ Y S+L FC S + G SLT QE + TI +T+I
Sbjct: 246 VKHLGYASHLMEIFCDSEENTEGTSLTQQESLSRTIPPDKTVI 288
>AL137516-1|CAB70782.1| 644|Homo sapiens hypothetical protein
protein.
Length = 644
Score = 30.3 bits (65), Expect = 6.2
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 15 TASSSPCTRSSRCGMALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTP 194
TA++SP + R G+ + KL + T+ RR + G RP K + + T
Sbjct: 472 TATASPAAPARRRGLECSECKKLFSTETSLQVHRR-IHTGERPYPCPDCGKAFR--QSTH 528
Query: 195 TDEHQLLYDEHNPFS--ICG 248
+H+ L+ PF+ +CG
Sbjct: 529 LKDHRRLHTGERPFACEVCG 548
>AL135902-1|CAC38375.1| 553|Homo sapiens interleukin 20 receptor,
alpha protein.
Length = 553
Score = 30.3 bits (65), Expect = 6.2
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 465 IKYVLYVSYLF-YFCSSFVRSFGHSLTSQELMRPTISEVQTII 590
+K++ Y S+L FC S + G SLT QE + TI +T+I
Sbjct: 357 VKHLGYASHLMEIFCDSEENTEGTSLTQQESLSRTIPPDKTVI 399
>AK131418-1|BAD18565.1| 896|Homo sapiens protein ( Homo sapiens
cDNA FLJ16529 fis, clone OCBBF2011669, weakly similar
to Zinc finger protein 91. ).
Length = 896
Score = 30.3 bits (65), Expect = 6.2
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 15 TASSSPCTRSSRCGMALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTP 194
TA++SP + R G+ + KL + T+ RR + G RP K + + T
Sbjct: 724 TATASPAAPARRRGLECSECKKLFSTETSLQVHRR-IHTGERPYPCPDCGKAFR--QSTH 780
Query: 195 TDEHQLLYDEHNPFS--ICG 248
+H+ L+ PF+ +CG
Sbjct: 781 LKDHRRLHTGERPFACEVCG 800
>AK131369-1|BAD18520.1| 986|Homo sapiens protein ( Homo sapiens cDNA
FLJ16417 fis, clone BRACE3001113, weakly similar to Zinc
finger protein 91. ).
Length = 986
Score = 30.3 bits (65), Expect = 6.2
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 15 TASSSPCTRSSRCGMALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTP 194
TA++SP + R G+ + KL + T+ RR + G RP K + + T
Sbjct: 814 TATASPAAPARRRGLECSECKKLFSTETSLQVHRR-IHTGERPYPCPDCGKAFR--QSTH 870
Query: 195 TDEHQLLYDEHNPFS--ICG 248
+H+ L+ PF+ +CG
Sbjct: 871 LKDHRRLHTGERPFACEVCG 890
>AK074788-1|BAC11210.1| 394|Homo sapiens protein ( Homo sapiens
cDNA FLJ90307 fis, clone NT2RP2000739, weakly similar to
ZINC FINGER PROTEIN 83. ).
Length = 394
Score = 30.3 bits (65), Expect = 6.2
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 15 TASSSPCTRSSRCGMALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTP 194
TA++SP + R G+ + KL + T+ RR + G RP K + + T
Sbjct: 222 TATASPAAPARRRGLECSECKKLFSTETSLQVHRR-IHTGERPYPCPDCGKAFR--QSTH 278
Query: 195 TDEHQLLYDEHNPFS--ICG 248
+H+ L+ PF+ +CG
Sbjct: 279 LKDHRRLHTGERPFACEVCG 298
>AK025712-1|BAB15225.1| 394|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22059 fis, clone HEP10093. ).
Length = 394
Score = 30.3 bits (65), Expect = 6.2
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 15 TASSSPCTRSSRCGMALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTP 194
TA++SP + R G+ + KL + T+ RR + G RP K + + T
Sbjct: 222 TATASPAAPARRRGLECSECKKLFSTETSLQVHRR-IHTGERPYPCPDCGKAFR--QSTH 278
Query: 195 TDEHQLLYDEHNPFS--ICG 248
+H+ L+ PF+ +CG
Sbjct: 279 LKDHRRLHTGERPFACEVCG 298
>BC146657-1|AAI46658.1| 771|Homo sapiens CGN protein protein.
Length = 771
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 79 LKNMLRAMPQREDLVHGLELAVREV 5
L+NM R + Q EDL HGLE V E+
Sbjct: 418 LQNMKRLLDQGEDLRHGLETQVMEL 442
>AL365436-3|CAI16590.1| 1203|Homo sapiens cingulin protein.
Length = 1203
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 79 LKNMLRAMPQREDLVHGLELAVREV 5
L+NM R + Q EDL HGLE V E+
Sbjct: 424 LQNMKRLLDQGEDLRHGLETQVMEL 448
>AF263462-1|AAF74498.1| 1203|Homo sapiens cingulin protein.
Length = 1203
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 79 LKNMLRAMPQREDLVHGLELAVREV 5
L+NM R + Q EDL HGLE V E+
Sbjct: 424 LQNMKRLLDQGEDLRHGLETQVMEL 448
>AB037740-1|BAA92557.1| 1208|Homo sapiens KIAA1319 protein protein.
Length = 1208
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 79 LKNMLRAMPQREDLVHGLELAVREV 5
L+NM R + Q EDL HGLE V E+
Sbjct: 429 LQNMKRLLDQGEDLRHGLETQVMEL 453
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,412,577
Number of Sequences: 237096
Number of extensions: 1216734
Number of successful extensions: 4692
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 3570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4684
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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