Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30237
         (647 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075425-1|AAL68241.1| 1234|Drosophila melanogaster LD46584p pro...   117   2e-26
AE014296-317|AAF47535.1| 1234|Drosophila melanogaster CG7961-PB,...   117   2e-26
AE014296-316|AAF47534.1| 1234|Drosophila melanogaster CG7961-PA,...   117   2e-26
AJ011114-1|CAA09492.1| 1234|Drosophila melanogaster coatomer alp...   112   3e-25

>AY075425-1|AAL68241.1| 1234|Drosophila melanogaster LD46584p protein.
          Length = 1234

 Score =  117 bits (281), Expect = 2e-26
 Identities = 53/64 (82%), Positives = 57/64 (89%)
 Frame = +3

Query: 60   ALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEHNPFS 239
            ALNMFFKLKNY+TAASFARRLLEL PRP+VAQQ RKILQACE  P DEHQL Y+E NPF+
Sbjct: 1118 ALNMFFKLKNYKTAASFARRLLELAPRPDVAQQVRKILQACEVNPVDEHQLQYEEFNPFT 1177

Query: 240  ICGI 251
            ICGI
Sbjct: 1178 ICGI 1181



 Score = 74.9 bits (176), Expect = 8e-14
 Identities = 31/50 (62%), Positives = 39/50 (78%)
 Frame = +2

Query: 257  KPIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAEIGKDALGLRICPLQF 406
            KP+YRGKPE  C  C++SF P+ KG LC VC V++IGKD++GLRI  LQF
Sbjct: 1184 KPLYRGKPEVTCPFCSSSFDPQFKGNLCTVCEVSQIGKDSIGLRISNLQF 1233



 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +2

Query: 2    AYFTHCKLQPVHQILTLR 55
            AYFTHCKLQPVHQILTLR
Sbjct: 1099 AYFTHCKLQPVHQILTLR 1116


>AE014296-317|AAF47535.1| 1234|Drosophila melanogaster CG7961-PB,
            isoform B protein.
          Length = 1234

 Score =  117 bits (281), Expect = 2e-26
 Identities = 53/64 (82%), Positives = 57/64 (89%)
 Frame = +3

Query: 60   ALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEHNPFS 239
            ALNMFFKLKNY+TAASFARRLLEL PRP+VAQQ RKILQACE  P DEHQL Y+E NPF+
Sbjct: 1118 ALNMFFKLKNYKTAASFARRLLELAPRPDVAQQVRKILQACEVNPVDEHQLQYEEFNPFT 1177

Query: 240  ICGI 251
            ICGI
Sbjct: 1178 ICGI 1181



 Score = 74.9 bits (176), Expect = 8e-14
 Identities = 31/50 (62%), Positives = 39/50 (78%)
 Frame = +2

Query: 257  KPIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAEIGKDALGLRICPLQF 406
            KP+YRGKPE  C  C++SF P+ KG LC VC V++IGKD++GLRI  LQF
Sbjct: 1184 KPLYRGKPEVTCPFCSSSFDPQFKGNLCTVCEVSQIGKDSIGLRISNLQF 1233



 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +2

Query: 2    AYFTHCKLQPVHQILTLR 55
            AYFTHCKLQPVHQILTLR
Sbjct: 1099 AYFTHCKLQPVHQILTLR 1116


>AE014296-316|AAF47534.1| 1234|Drosophila melanogaster CG7961-PA,
            isoform A protein.
          Length = 1234

 Score =  117 bits (281), Expect = 2e-26
 Identities = 53/64 (82%), Positives = 57/64 (89%)
 Frame = +3

Query: 60   ALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEHNPFS 239
            ALNMFFKLKNY+TAASFARRLLEL PRP+VAQQ RKILQACE  P DEHQL Y+E NPF+
Sbjct: 1118 ALNMFFKLKNYKTAASFARRLLELAPRPDVAQQVRKILQACEVNPVDEHQLQYEEFNPFT 1177

Query: 240  ICGI 251
            ICGI
Sbjct: 1178 ICGI 1181



 Score = 74.9 bits (176), Expect = 8e-14
 Identities = 31/50 (62%), Positives = 39/50 (78%)
 Frame = +2

Query: 257  KPIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAEIGKDALGLRICPLQF 406
            KP+YRGKPE  C  C++SF P+ KG LC VC V++IGKD++GLRI  LQF
Sbjct: 1184 KPLYRGKPEVTCPFCSSSFDPQFKGNLCTVCEVSQIGKDSIGLRISNLQF 1233



 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +2

Query: 2    AYFTHCKLQPVHQILTLR 55
            AYFTHCKLQPVHQILTLR
Sbjct: 1099 AYFTHCKLQPVHQILTLR 1116


>AJ011114-1|CAA09492.1| 1234|Drosophila melanogaster coatomer alpha
            subunit protein.
          Length = 1234

 Score =  112 bits (270), Expect = 3e-25
 Identities = 52/64 (81%), Positives = 56/64 (87%)
 Frame = +3

Query: 60   ALNMFFKLKNYRTAASFARRLLELGPRPEVAQQARKILQACEKTPTDEHQLLYDEHNPFS 239
            ALNMFFKLKNY+TAASFARRLLEL PRP+VAQQ RKILQA E  P DEHQL Y+E NPF+
Sbjct: 1118 ALNMFFKLKNYKTAASFARRLLELAPRPDVAQQVRKILQAYEVNPVDEHQLQYEEFNPFT 1177

Query: 240  ICGI 251
            ICGI
Sbjct: 1178 ICGI 1181



 Score = 74.9 bits (176), Expect = 8e-14
 Identities = 31/50 (62%), Positives = 39/50 (78%)
 Frame = +2

Query: 257  KPIYRGKPEEKCSLCAASFMPEHKGKLCPVCGVAEIGKDALGLRICPLQF 406
            KP+YRGKPE  C  C++SF P+ KG LC VC V++IGKD++GLRI  LQF
Sbjct: 1184 KPLYRGKPEVTCPFCSSSFDPQFKGNLCTVCEVSQIGKDSIGLRISNLQF 1233



 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +2

Query: 2    AYFTHCKLQPVHQILTLR 55
            AYFTHCKLQPVHQILTLR
Sbjct: 1099 AYFTHCKLQPVHQILTLR 1116


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,359,193
Number of Sequences: 53049
Number of extensions: 393378
Number of successful extensions: 1391
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1391
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)