Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30234
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    27   0.77 
AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.           24   5.4  
AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           24   5.4  
AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.           24   5.4  
AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.           24   5.4  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       24   5.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   7.2  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   7.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   9.5  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 345 PLPGRKENPLPRESARSPTLPRCQTCPLP 431
           P   R E  + R +  SP L +  TCP+P
Sbjct: 37  PRTRRSEAVMTRSTPSSPRLAQASTCPVP 65


>AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 611 GAGHVHFDWNMNFLFNGVRFWHIYLDGDGSVD 516
           G G + F +  N   +  R W  Y +G GSVD
Sbjct: 172 GGGWLVFQYRFNGSVDFNRDWVAYRNGFGSVD 203


>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 611 GAGHVHFDWNMNFLFNGVRFWHIYLDGDGSVD 516
           G G + F +  N   +  R W  Y +G GSVD
Sbjct: 172 GGGWLVFQYRFNGSVDFNRDWVAYRNGFGSVD 203


>AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 611 GAGHVHFDWNMNFLFNGVRFWHIYLDGDGSVD 516
           G G + F +  N   +  R W  Y +G GSVD
Sbjct: 172 GGGWLVFQYRFNGSVDFNRDWVAYRNGFGSVD 203


>AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 611 GAGHVHFDWNMNFLFNGVRFWHIYLDGDGSVD 516
           G G + F +  N   +  R W  Y +G GSVD
Sbjct: 172 GGGWLVFQYRFNGSVDFNRDWVAYRNGFGSVD 203


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
 Frame = -2

Query: 495 HLLFDWVGL------RYVNWYLDNLFNWVRDMFDNGVGLGNV 388
           HL++ + G+      R ++ YLD   NW R      VGL NV
Sbjct: 62  HLMYGFFGINEDATVRIIDPYLDLEENWGRGHIKRFVGLKNV 103


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +2

Query: 389 TFPNPTPLSNMSLTQLKRLSRYQFTYRNPTQS 484
           TF   TP+   + T  K    YQ+T R P  S
Sbjct: 798 TFTKLTPIWRCATTVRKGRKLYQYTIRLPINS 829


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 13/45 (28%), Positives = 17/45 (37%)
 Frame = +2

Query: 509 CPSRQTRPRQGICARTLPR*KESSCSSRSARGPLLYPVEKKVLTP 643
           C S +     G+  R   R     C S  A G  L+  E +V  P
Sbjct: 26  CTSAKMMASSGMSTRASARSASVDCRSSLASGSKLFAPEPRVALP 70


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 427 KGHV*QRGRVGERALSRGRGFSFLPG 350
           KG    RG+VGER     +G    PG
Sbjct: 322 KGQAGDRGQVGERGHKGEKGLPGQPG 347


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,354
Number of Sequences: 2352
Number of extensions: 9917
Number of successful extensions: 57
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)