Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30234
         (718 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-73|AAF47371.2| 1314|Drosophila melanogaster CG13881-PA ...    30   3.6  
BT016089-1|AAV36974.1| 1341|Drosophila melanogaster LD40982p pro...    29   6.3  
AF145682-1|AAD38657.1| 1239|Drosophila melanogaster BcDNA.LD2333...    29   6.3  
AE014134-2148|AAF53157.2| 1296|Drosophila melanogaster CG7061-PB...    29   6.3  
AE014134-2147|AAF53156.2| 1341|Drosophila melanogaster CG7061-PA...    29   6.3  

>AE014296-73|AAF47371.2| 1314|Drosophila melanogaster CG13881-PA
            protein.
          Length = 1314

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
 Frame = +3

Query: 321  SLPRRKAHPLPGRKENPLPRESARSPT-LPRCQTC--PLPS*RDCQGTSSRTATLPSRKE 491
            +LP  ++    G K  P PR S ++PT LP       P PS R  Q T  R      R  
Sbjct: 865  TLPLSRSRLSAGVKPTPAPRTSLQTPTPLPETTVAKDPTPSKRKSQPTVRREYPSLDRLV 924

Query: 492  GALPSTVP 515
             +   T+P
Sbjct: 925  ASTTGTIP 932


>BT016089-1|AAV36974.1| 1341|Drosophila melanogaster LD40982p
           protein.
          Length = 1341

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 330 RRKAHPLPGRKENPLPRESARSPTLPRCQ 416
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 295 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 323


>AF145682-1|AAD38657.1| 1239|Drosophila melanogaster BcDNA.LD23336
           protein.
          Length = 1239

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 330 RRKAHPLPGRKENPLPRESARSPTLPRCQ 416
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 193 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 221


>AE014134-2148|AAF53157.2| 1296|Drosophila melanogaster CG7061-PB,
           isoform B protein.
          Length = 1296

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 330 RRKAHPLPGRKENPLPRESARSPTLPRCQ 416
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 250 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 278


>AE014134-2147|AAF53156.2| 1341|Drosophila melanogaster CG7061-PA,
           isoform A protein.
          Length = 1341

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 330 RRKAHPLPGRKENPLPRESARSPTLPRCQ 416
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 295 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 323


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,961,786
Number of Sequences: 53049
Number of extensions: 495201
Number of successful extensions: 1293
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)