Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30233
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    27   0.20 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.80 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.80 
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   3.2  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   3.2  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   4.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.5  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +3

Query: 420 PKTEASLLSIHQEQVQPLVEPRPQHQNLLPHTKSKSRAG 536
           P  E  L  +HQ +  P  E + QH +  PH     R G
Sbjct: 105 PHHEIKLQHLHQSKFNPHEEVKLQHLHQFPHHDFLEREG 143


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 468 PLVEPRPQHQNLLPHTKSKSRAGSDG 545
           PL +P P H  + P+      AGS G
Sbjct: 133 PLSQPPPAHMGIPPYQLDSKTAGSMG 158


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 468 PLVEPRPQHQNLLPHTKSKSRAGSDG 545
           PL +P P H  + P+      AGS G
Sbjct: 25  PLSQPPPAHMGIPPYQLDSKTAGSMG 50


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = +1

Query: 427 QKPH---CFPSIKNRSSLWLNQDLNTKIFCPIRSQNLEQGQTALLLM 558
           Q PH     P   ++ S W+NQD++        + +  QGQ  L  M
Sbjct: 96  QSPHRIYMHPESPSKGSHWMNQDISFSRVKLTNTCSPPQGQLVLSSM 142



 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 168 PGGHADHSSPHR 203
           P GH +  SPHR
Sbjct: 89  PAGHEEAQSPHR 100


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 285 RPHKPGFYAPSSPP 326
           RPH P  Y P  PP
Sbjct: 22  RPHSPEPYPPRCPP 35


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 14/50 (28%), Positives = 20/50 (40%)
 Frame = +3

Query: 192 SPHRPDGLRSGRCNSIIHIHNTTTKPPELTTRPHKPGFYAPSSPPSVTDR 341
           SPH+ + L+      II +         LT +  KPG      P +V  R
Sbjct: 8   SPHKINVLQQNDRREIIILRKNPQDDILLTKKKSKPGGKTAPQPVAVARR 57


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 348 HYWQRFILLPLEQATQYTVIRP 413
           H++  F L PL+      V+RP
Sbjct: 311 HFYCAFSLYPLKSTFYLNVVRP 332


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,058
Number of Sequences: 336
Number of extensions: 4151
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)