Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30232
         (701 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7Q4S1 Cluster: ENSANGP00000013100; n=2; Culicidae|Rep:...    55   1e-06
UniRef50_UPI0000D575D6 Cluster: PREDICTED: similar to CG13392-PA...    55   2e-06
UniRef50_Q9VLM7 Cluster: CG13392-PA; n=2; Sophophora|Rep: CG1339...    53   8e-06
UniRef50_UPI0000E46FBB Cluster: PREDICTED: similar to Transmembr...    35   1.7  
UniRef50_Q8I5J1 Cluster: Putative uncharacterized protein; n=1; ...    35   2.2  
UniRef50_Q9N5F6 Cluster: Putative uncharacterized protein; n=2; ...    33   9.0  
UniRef50_P0AAA8 Cluster: Protein wzxE; n=41; cellular organisms|...    33   9.0  

>UniRef50_Q7Q4S1 Cluster: ENSANGP00000013100; n=2; Culicidae|Rep:
           ENSANGP00000013100 - Anopheles gambiae str. PEST
          Length = 222

 Score = 55.2 bits (127), Expect = 1e-06
 Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
 Frame = +3

Query: 87  MALM--KAKTIPKDAVTLDELEATNYAWDIVNNWNNKLDIWALRYGPVILGACSAIGG 254
           MAL+  KA  IPKDAV L E EA  Y   +V NW N+ ++W + Y P +LGA +   G
Sbjct: 1   MALLHKKASEIPKDAVRLSEEEAVQYFLKLVQNWENRSEVWPIIYTPGVLGAGTVFTG 58



 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 22/40 (55%), Positives = 28/40 (70%)
 Frame = +1

Query: 400 EGCPICYEMRASALQIGLGVIYPMILGPTSAMMFANHTQH 519
           E CP+C + RA+ LQ G GV YPM+L P S+ MFA  T+H
Sbjct: 108 EPCPVCLQTRAALLQTGFGVAYPMLLVPLSSFMFA--TRH 145



 Score = 38.3 bits (85), Expect = 0.18
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 260 INRQYRMKLKIGHYGYLSSVIPISVMPGMLTVIYH 364
           IN  YR  LK+G YG LSS +P   +P ++   +H
Sbjct: 61  INNYYRRVLKLGSYGRLSSYLPAVALPAIMATFFH 95


>UniRef50_UPI0000D575D6 Cluster: PREDICTED: similar to CG13392-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG13392-PA - Tribolium castaneum
          Length = 215

 Score = 54.8 bits (126), Expect = 2e-06
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 11/196 (5%)
 Frame = +3

Query: 111 IPKDAVTLDELEATNYAWDIVNNWNNKLDIWALRYGPVILGACSAIGG**LTDSIE*N*K 290
           IP DAV L E EA  Y   ++N+W N  DI   +YGP +L A     G  L        K
Sbjct: 11  IPPDAVILTEEEAFKYQSKLLNSWKNTSDILGYKYGPYLLSAAGFFSGFFLNSYYRQKFK 70

Query: 291 *ATMDIYHQLSPYL*CPEC*Q*FIIDNIN*FVTFEK*RMSNML---*DAC--------FS 437
              +  Y + S YL  P C   F+    + F+T  +   S+++    DAC         +
Sbjct: 71  ---LLSYGRASTYL--PMC---FLPAAFS-FLTHVEFVQSDVILQKRDACPVCLEMRGAA 121

Query: 438 LTNRLRCNLSNDLRTYICYDVC*SYSTYRVPDLFEGPRVIFKFLSKITKPFMGTIATIAV 617
           +   + C     L       +   Y+T+ VPDL   P  ++  +   ++P  G +  I +
Sbjct: 122 IQGLVGCVFPTILAPMANLSLAHRYATFNVPDLAREPTKVYNLIRLKSQPISGILLAIFL 181

Query: 618 LQFVTSNVITYFEMKN 665
            Q    +++TY E K+
Sbjct: 182 GQAFFGSLVTYLEAKS 197



 Score = 40.3 bits (90), Expect = 0.045
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +1

Query: 394 KNEGCPICYEMRASALQIGLGVIYPMILGPTSAMMFAN 507
           K + CP+C EMR +A+Q  +G ++P IL P + +  A+
Sbjct: 107 KRDACPVCLEMRGAAIQGLVGCVFPTILAPMANLSLAH 144


>UniRef50_Q9VLM7 Cluster: CG13392-PA; n=2; Sophophora|Rep:
           CG13392-PA - Drosophila melanogaster (Fruit fly)
          Length = 223

 Score = 52.8 bits (121), Expect = 8e-06
 Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +3

Query: 87  MALMKAKT--IPKDAVTLDELEATNYAWDIVNNWNNKLDIWALRYGPVILGACSA 245
           MAL +AK   +P+DAV + E +A  Y W I+ +W+   ++W+LRY P IL A +A
Sbjct: 1   MALSRAKPDELPRDAVVITEDQALKYQWKIITSWDKIGEVWSLRYTPGILSALAA 55



 Score = 47.6 bits (108), Expect = 3e-04
 Identities = 17/33 (51%), Positives = 25/33 (75%)
 Frame = +1

Query: 406 CPICYEMRASALQIGLGVIYPMILGPTSAMMFA 504
           CP+C +MR++A Q  LG++YP IL P +A +FA
Sbjct: 111 CPVCIQMRSAAFQTSLGIVYPTILAPFAAFLFA 143



 Score = 42.3 bits (95), Expect = 0.011
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +3

Query: 516 TYRVPDLFEGPRVIFKFLSKITKPFMGTIATIAVLQFVTSNVITYFEMKNNFTI 677
           TYR+P + E PR +F    K T+P +  + T+  LQ + +  +T  E K NF +
Sbjct: 148 TYRIPSITENPREVFLLWRKFTRPIVPALGTLIGLQALLTMFLTGQEDKQNFKL 201



 Score = 39.5 bits (88), Expect = 0.078
 Identities = 15/36 (41%), Positives = 25/36 (69%)
 Frame = +2

Query: 260 INRQYRMKLKIGHYGYLSSVIPISVMPGMLTVIYHR 367
           IN  YR KL++G +G LS+ +PI  +P + T++ H+
Sbjct: 61  INNHYRTKLRLGGHGRLSTYLPIVAVPAIFTMLAHK 96


>UniRef50_UPI0000E46FBB Cluster: PREDICTED: similar to Transmembrane
           protein 126A; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to Transmembrane protein 126A -
           Strongylocentrotus purpuratus
          Length = 178

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +1

Query: 406 CPICYEMRASALQIGLGVIYPMILG-PTSAMMFANH 510
           CP+C  +RA AL + LG IYP +L  P ++ +  N+
Sbjct: 76  CPLCASLRAGALGLTLGSIYPFLLAIPLNSALAINY 111


>UniRef50_Q8I5J1 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 2558

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
 Frame = +2

Query: 17   TYVFKYESNLYLL-KSNSDMKFLHH---GINESQNNPERCSNV-GRVRSHQLCMGY 169
            TY F Y    Y + K N DM   HH    IN + NN  R +N+ G V++ +L   Y
Sbjct: 1413 TYPFNYNEPFYFIYKPNKDMSMDHHHHNNINNNNNNNIRLNNMNGNVKNSELKNNY 1468


>UniRef50_Q9N5F6 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 1853

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +3

Query: 174 NNWNNKLDIWALRYGPVILGACSAIGG**LTDS 272
           NNWNN L+  A +  P +LGA  A+ G  LT S
Sbjct: 886 NNWNNILNFTAYQLIPDLLGATGAVSGRALTSS 918


>UniRef50_P0AAA8 Cluster: Protein wzxE; n=41; cellular
           organisms|Rep: Protein wzxE - Shigella flexneri
          Length = 416

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +3

Query: 78  FSIMALMKAKTIPKDAVTLDELEATNYAWDIVNNW 182
           F++MAL+ + T+P   + + +L A  Y+WD V  W
Sbjct: 220 FTLMALITSVTLPVAYIMMRKLLAAQYSWDEVGIW 254


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,950,522
Number of Sequences: 1657284
Number of extensions: 11427967
Number of successful extensions: 26602
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26575
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)